RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 MNS1Q8NEH6 495 aa17.26■□□□□ 0.35
NCAPD3-203ENST00000525964 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
NCAPD3-203ENST00000525964 STARD3NLO95772 234 aa17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 ZFYVE27Q5T4F4 411 aa17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 PIP4K2BP78356 416 aa17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 FILIP1LQ4L180 1135 aa17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 PRXQ9BXM0 1461 aa17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 KRT18P05783 430 aaKnown RBP17.25■□□□□ 0.35
NCAPD3-203ENST00000525964 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
NCAPD3-203ENST00000525964 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
NCAPD3-203ENST00000525964 RDXP35241 583 aaKnown RBP17.24■□□□□ 0.35
NCAPD3-203ENST00000525964 SETQ01105 290 aaPredicted RBP17.24■□□□□ 0.35
NCAPD3-203ENST00000525964 KDM4AO75164 1064 aa17.24■□□□□ 0.35
NCAPD3-203ENST00000525964 RUFY1Q96T51 708 aa17.24■□□□□ 0.35
NCAPD3-203ENST00000525964 CTNNA3Q9UI47 895 aa17.24■□□□□ 0.35
NCAPD3-203ENST00000525964 DAPK1P53355 1430 aa17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 ARGLU1Q9NWB6 273 aaPredicted RBP17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 NFE2L2Q16236 605 aa17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 BCAR3O75815 825 aa17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 PDILTQ8N807 584 aa17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
NCAPD3-203ENST00000525964 GNAT3A8MTJ3 354 aa17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 XPCQ01831 940 aaPredicted RBP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.22■□□□□ 0.351e-7■■■■■ 109.9
NCAPD3-203ENST00000525964 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 HSP90AA2PQ14568 343 aaPredicted RBP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 RBM5P52756 815 aaKnown RBP eCLIP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
NCAPD3-203ENST00000525964 CCDC69A6NI79 296 aa17.21■□□□□ 0.35
NCAPD3-203ENST00000525964 AACSQ86V21 672 aa17.21■□□□□ 0.35
NCAPD3-203ENST00000525964 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
NCAPD3-203ENST00000525964 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
NCAPD3-203ENST00000525964 TEX35Q5T0J7 233 aa17.2■□□□□ 0.34
NCAPD3-203ENST00000525964 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.2■□□□□ 0.34
NCAPD3-203ENST00000525964 SMARCE1Q969G3 411 aa17.2■□□□□ 0.34
NCAPD3-203ENST00000525964 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
NCAPD3-203ENST00000525964 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 HMGXB3Q12766 1538 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 MRE11P49959 708 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 AK7Q96M32 723 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 CDKL5O76039 1030 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 FIBPO43427 364 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 RAI14Q9P0K7 980 aa17.19■□□□□ 0.34
NCAPD3-203ENST00000525964 KRT32Q14532 448 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 SYCP1Q15431 976 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 HSP90AB2PQ58FF8 381 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 TDO2P48775 406 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 TMOD2Q9NZR1 351 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 NOL7Q9UMY1 257 aaKnown RBP17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 AMOTQ4VCS5 1084 aa17.18■□□□□ 0.34
NCAPD3-203ENST00000525964 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 FMNL2Q96PY5 1086 aa17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 STIM1Q13586 685 aa17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 NFKBIBQ15653 356 aa17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 HSP90B2PQ58FF3 399 aa17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 RNF214Q8ND24 703 aa17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.17■□□□□ 0.34
NCAPD3-203ENST00000525964 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 CCDC39Q9UFE4 941 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 WDR33Q9C0J8 1336 aaKnown RBP17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 MYO6Q9UM54 1294 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
NCAPD3-203ENST00000525964 CAVIN1Q6NZI2 390 aaKnown RBP17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 SMC2O95347 1197 aa17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 KRT85P78386 507 aa17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 TRAK2O60296 914 aa17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 PRPF40AO75400 957 aaKnown RBP17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 DHX8Q14562 1220 aaKnown RBP17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 PAF1Q8N7H5 531 aa17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 CAGE1Q8TC20 777 aa17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 DACH1Q9UI36 760 aa17.15■□□□□ 0.34
NCAPD3-203ENST00000525964 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.34
NCAPD3-203ENST00000525964 PDIA4P13667 645 aaKnown RBP17.14■□□□□ 0.34
NCAPD3-203ENST00000525964 ZSCAN31Q96LW9 406 aaPredicted RBP17.14■□□□□ 0.34
NCAPD3-203ENST00000525964 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.34
NCAPD3-203ENST00000525964 CEBPZQ03701 1054 aaKnown RBP17.14■□□□□ 0.33
NCAPD3-203ENST00000525964 ZNHIT6Q9NWK9 470 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms