RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 UTRNP46939 3433 aa18.25■□□□□ 0.51
CCDC90B-205ENST00000525916 BCL11BQ9C0K0 894 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-205ENST00000525916 AATKQ6ZMQ8 1374 aa18.24■□□□□ 0.51
CCDC90B-205ENST00000525916 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-205ENST00000525916 TOM1L2Q6ZVM7 507 aa18.23■□□□□ 0.51
CCDC90B-205ENST00000525916 PROM2Q8N271 834 aa18.23■□□□□ 0.51
CCDC90B-205ENST00000525916 USP6P35125 1406 aa18.23■□□□□ 0.51
CCDC90B-205ENST00000525916 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
CCDC90B-205ENST00000525916 PTGER2P43116 358 aa18.22■□□□□ 0.51
CCDC90B-205ENST00000525916 ZNF784Q8NCA9 323 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-205ENST00000525916 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-205ENST00000525916 CABP2Q9NPB3 220 aa18.21■□□□□ 0.51
CCDC90B-205ENST00000525916 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-205ENST00000525916 BRD4O60885 1362 aaPredicted RBP18.2■□□□□ 0.5
CCDC90B-205ENST00000525916 NHSQ6T4R5 1651 aa18.2■□□□□ 0.5
CCDC90B-205ENST00000525916 NLRP6P59044 892 aa18.2■□□□□ 0.5
CCDC90B-205ENST00000525916 BCL9O00512 1426 aa18.2■□□□□ 0.5
CCDC90B-205ENST00000525916 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-205ENST00000525916 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
CCDC90B-205ENST00000525916 WDR17Q8IZU2 1322 aa18.19■□□□□ 0.5
CCDC90B-205ENST00000525916 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-205ENST00000525916 AXIN2Q9Y2T1 843 aa18.18■□□□□ 0.5
CCDC90B-205ENST00000525916 BTAF1O14981 1849 aa18.17■□□□□ 0.5
CCDC90B-205ENST00000525916 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
CCDC90B-205ENST00000525916 STK32BQ9NY57 414 aa18.17■□□□□ 0.5
CCDC90B-205ENST00000525916 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-205ENST00000525916 PAPPAQ13219 1627 aa18.16■□□□□ 0.5
CCDC90B-205ENST00000525916 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
CCDC90B-205ENST00000525916 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
CCDC90B-205ENST00000525916 CABP1Q9NZU7 370 aa18.16■□□□□ 0.5
CCDC90B-205ENST00000525916 SLC15A2Q16348 729 aa18.15■□□□□ 0.5
CCDC90B-205ENST00000525916 CDCA7Q9BWT1 371 aaPredicted RBP18.14■□□□□ 0.49
CCDC90B-205ENST00000525916 TNS2Q63HR2 1409 aa18.14■□□□□ 0.49
CCDC90B-205ENST00000525916 LTN1O94822 1766 aa18.13■□□□□ 0.49
CCDC90B-205ENST00000525916 SGIP1Q9BQI5 828 aa18.13■□□□□ 0.49
CCDC90B-205ENST00000525916 MTFR1LQ9H019 292 aa18.13■□□□□ 0.49
CCDC90B-205ENST00000525916 NFAT5O94916 1531 aa18.13■□□□□ 0.49
CCDC90B-205ENST00000525916 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
CCDC90B-205ENST00000525916 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
CCDC90B-205ENST00000525916 TUBGCP6Q96RT7 1819 aa18.12■□□□□ 0.49
CCDC90B-205ENST00000525916 SOX12O15370 315 aa18.11■□□□□ 0.49
CCDC90B-205ENST00000525916 ARHGEF25Q86VW2 580 aa18.11■□□□□ 0.49
CCDC90B-205ENST00000525916 CARD10Q9BWT7 1032 aa18.11■□□□□ 0.49
CCDC90B-205ENST00000525916 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
CCDC90B-205ENST00000525916 MON2Q7Z3U7 1717 aa18.1■□□□□ 0.49
CCDC90B-205ENST00000525916 ABCC6O95255 1503 aa18.1■□□□□ 0.49
CCDC90B-205ENST00000525916 EXOC5O00471 708 aa18.09■□□□□ 0.49
CCDC90B-205ENST00000525916 CCDC7Q96M83 1385 aa18.08■□□□□ 0.49
CCDC90B-205ENST00000525916 C1QTNF8P60827 252 aa18.08■□□□□ 0.48
CCDC90B-205ENST00000525916 ACSBG1Q96GR2 724 aa18.08■□□□□ 0.48
CCDC90B-205ENST00000525916 COL24A1Q17RW2 1714 aa18.08■□□□□ 0.48
CCDC90B-205ENST00000525916 TTC21BQ7Z4L5 1316 aa18.07■□□□□ 0.48
CCDC90B-205ENST00000525916 KCNH5Q8NCM2 988 aa18.07■□□□□ 0.48
CCDC90B-205ENST00000525916 ARXQ96QS3 562 aa18.07■□□□□ 0.48
CCDC90B-205ENST00000525916 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
CCDC90B-205ENST00000525916 MAP3K5Q99683 1374 aa18.05■□□□□ 0.48
CCDC90B-205ENST00000525916 EVC2Q86UK5 1308 aa18.04■□□□□ 0.48
CCDC90B-205ENST00000525916 ZNF827Q17R98 1081 aa18.04■□□□□ 0.48
CCDC90B-205ENST00000525916 GOLGB1Q14789 3259 aaKnown RBP18.04■□□□□ 0.48
CCDC90B-205ENST00000525916 TTC21AQ8NDW8 1320 aa18.02■□□□□ 0.48
CCDC90B-205ENST00000525916 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.48
CCDC90B-205ENST00000525916 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
CCDC90B-205ENST00000525916 GPR162Q16538 588 aa18■□□□□ 0.47
CCDC90B-205ENST00000525916 LRRC4BQ9NT99 713 aa18■□□□□ 0.47
CCDC90B-205ENST00000525916 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
CCDC90B-205ENST00000525916 ERBB3P21860 1342 aa17.99■□□□□ 0.47
CCDC90B-205ENST00000525916 LY75O60449 1722 aa17.99■□□□□ 0.47
CCDC90B-205ENST00000525916 KLHL34Q8N239 644 aa17.99■□□□□ 0.47
CCDC90B-205ENST00000525916 KTN1Q86UP2 1357 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-205ENST00000525916 NLRP2Q9NX02 1062 aa17.98■□□□□ 0.47
CCDC90B-205ENST00000525916 FAM208AQ9UK61 1670 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-205ENST00000525916 GIGYF1O75420 1035 aaPredicted RBP17.97■□□□□ 0.47
CCDC90B-205ENST00000525916 IL2RBP14784 551 aa17.97■□□□□ 0.47
CCDC90B-205ENST00000525916 RGPD2P0DJD1 1756 aa17.96■□□□□ 0.47
CCDC90B-205ENST00000525916 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-205ENST00000525916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC90B-205ENST00000525916 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
CCDC90B-205ENST00000525916 USP31Q70CQ4 1352 aa17.94■□□□□ 0.46
CCDC90B-205ENST00000525916 CEP350Q5VT06 3117 aa17.94■□□□□ 0.46
CCDC90B-205ENST00000525916 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
CCDC90B-205ENST00000525916 POLD1P28340 1107 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 IFFO2Q5TF58 517 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 NME9Q86XW9 330 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 NLGN2Q8NFZ4 835 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 SLC16A10Q8TF71 515 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 L3MBTL2Q969R5 705 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 CD163L1Q9NR16 1453 aa17.92■□□□□ 0.46
CCDC90B-205ENST00000525916 ROCK2O75116 1388 aaKnown RBP17.91■□□□□ 0.46
CCDC90B-205ENST00000525916 KCNQ4P56696 695 aa17.91■□□□□ 0.46
CCDC90B-205ENST00000525916 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
CCDC90B-205ENST00000525916 SBNO2Q9Y2G9 1366 aa17.9■□□□□ 0.46
CCDC90B-205ENST00000525916 DDX54Q8TDD1 881 aaKnown RBP17.88■□□□□ 0.45
CCDC90B-205ENST00000525916 TFCP2L1Q9NZI6 479 aa17.88■□□□□ 0.45
CCDC90B-205ENST00000525916 TAF1LQ8IZX4 1826 aa17.88■□□□□ 0.45
CCDC90B-205ENST00000525916 C5P01031 1676 aa17.87■□□□□ 0.45
CCDC90B-205ENST00000525916 YBX3P16989 372 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC90B-205ENST00000525916 SYTL4Q96C24 671 aaPredicted RBP17.86■□□□□ 0.45
CCDC90B-205ENST00000525916 NSD2O96028 1365 aa17.85■□□□□ 0.45
CCDC90B-205ENST00000525916 EDC4Q6P2E9 1401 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms