RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TXNRD1Q16881 649 aa25.96■■□□□ 1.75
PVT1-220ENST00000524165 ARXQ96QS3 562 aa25.96■■□□□ 1.75
PVT1-220ENST00000524165 ACEP12821 1306 aa25.95■■□□□ 1.75
PVT1-220ENST00000524165 AATKQ6ZMQ8 1374 aa25.95■■□□□ 1.74
PVT1-220ENST00000524165 ARHGEF28Q8N1W1 1705 aaKnown RBP25.94■■□□□ 1.74
PVT1-220ENST00000524165 GCP02774 474 aa25.94■■□□□ 1.74
PVT1-220ENST00000524165 NLRP13Q86W25 1043 aa25.92■■□□□ 1.74
PVT1-220ENST00000524165 MARCH10Q8NA82 808 aaPredicted RBP25.92■■□□□ 1.74
PVT1-220ENST00000524165 GPR162Q16538 588 aa25.91■■□□□ 1.74
PVT1-220ENST00000524165 PLEKHG3A1L390 1219 aa25.9■■□□□ 1.74
PVT1-220ENST00000524165 CCDC61Q9Y6R9 512 aa25.9■■□□□ 1.74
PVT1-220ENST00000524165 SHANK3Q9BYB0 1731 aa25.89■■□□□ 1.74
PVT1-220ENST00000524165 CDCA7Q9BWT1 371 aaPredicted RBP25.89■■□□□ 1.74
PVT1-220ENST00000524165 CDK19Q9BWU1 502 aa25.88■■□□□ 1.73
PVT1-220ENST00000524165 GOLGB1Q14789 3259 aaKnown RBP25.87■■□□□ 1.73
PVT1-220ENST00000524165 TOM1L2Q6ZVM7 507 aa25.86■■□□□ 1.73
PVT1-220ENST00000524165 PAPPAQ13219 1627 aa25.85■■□□□ 1.73
PVT1-220ENST00000524165 COL18A1P39060 1754 aa25.84■■□□□ 1.73
PVT1-220ENST00000524165 WDR17Q8IZU2 1322 aa25.82■■□□□ 1.72
PVT1-220ENST00000524165 BRD4O60885 1362 aaPredicted RBP25.82■■□□□ 1.72
PVT1-220ENST00000524165 NHSQ6T4R5 1651 aa25.8■■□□□ 1.72
PVT1-220ENST00000524165 SLIT3O75094 1523 aa25.8■■□□□ 1.72
PVT1-220ENST00000524165 COL24A1Q17RW2 1714 aa25.8■■□□□ 1.72
PVT1-220ENST00000524165 ZBTB7CA1YPR0 619 aa25.79■■□□□ 1.72
PVT1-220ENST00000524165 STAC3Q96MF2 364 aa25.79■■□□□ 1.72
PVT1-220ENST00000524165 EXOC5O00471 708 aa25.76■■□□□ 1.71
PVT1-220ENST00000524165 KDM2AQ9Y2K7 1162 aa25.76■■□□□ 1.71
PVT1-220ENST00000524165 QSER1Q2KHR3 1735 aa25.76■■□□□ 1.71
PVT1-220ENST00000524165 DCAF11Q8TEB1 546 aa25.75■■□□□ 1.71
PVT1-220ENST00000524165 RGPD5Q99666 1765 aa25.74■■□□□ 1.71
PVT1-220ENST00000524165 PELP1Q8IZL8 1130 aaKnown RBP25.74■■□□□ 1.71
PVT1-220ENST00000524165 SLC16A10Q8TF71 515 aa25.74■■□□□ 1.71
PVT1-220ENST00000524165 CARD10Q9BWT7 1032 aa25.74■■□□□ 1.71
PVT1-220ENST00000524165 AXIN2Q9Y2T1 843 aa25.74■■□□□ 1.71
PVT1-220ENST00000524165 NLRP6P59044 892 aa25.73■■□□□ 1.71
PVT1-220ENST00000524165 PPIP5K1Q6PFW1 1433 aa25.72■■□□□ 1.71
PVT1-220ENST00000524165 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
PVT1-220ENST00000524165 POLD1P28340 1107 aa25.71■■□□□ 1.71
PVT1-220ENST00000524165 BTAF1O14981 1849 aa25.71■■□□□ 1.71
PVT1-220ENST00000524165 GRIN3BO60391 1043 aa25.7■■□□□ 1.7
PVT1-220ENST00000524165 ZNF827Q17R98 1081 aa25.7■■□□□ 1.7
PVT1-220ENST00000524165 KLHL34Q8N239 644 aa25.7■■□□□ 1.7
PVT1-220ENST00000524165 CPSF1Q10570 1443 aaKnown RBP25.7■■□□□ 1.7
PVT1-220ENST00000524165 TRPM1Q7Z4N2 1603 aa25.7■■□□□ 1.7
PVT1-220ENST00000524165 HSPA6P17066 643 aa25.68■■□□□ 1.7
PVT1-220ENST00000524165 USP6P35125 1406 aa25.68■■□□□ 1.7
PVT1-220ENST00000524165 PIK3C2AO00443 1686 aa25.67■■□□□ 1.7
PVT1-220ENST00000524165 CCDC7Q96M83 1385 aa25.67■■□□□ 1.7
PVT1-220ENST00000524165 KAT6BQ8WYB5 2073 aa25.67■■□□□ 1.7
PVT1-220ENST00000524165 ATP10DQ9P241 1426 aa25.66■■□□□ 1.7
PVT1-220ENST00000524165 ABCC6O95255 1503 aa25.66■■□□□ 1.7
PVT1-220ENST00000524165 CSB-PGBD3P0DP91 1061 aa25.65■■□□□ 1.7
PVT1-220ENST00000524165 ARHGEF25Q86VW2 580 aa25.65■■□□□ 1.7
PVT1-220ENST00000524165 NLGN2Q8NFZ4 835 aa25.65■■□□□ 1.7
PVT1-220ENST00000524165 AKT1S1Q96B36 256 aa25.64■■□□□ 1.7
PVT1-220ENST00000524165 ACSBG1Q96GR2 724 aa25.64■■□□□ 1.7
PVT1-220ENST00000524165 LRRC4BQ9NT99 713 aa25.64■■□□□ 1.7
PVT1-220ENST00000524165 SRPK2P78362 688 aaKnown RBP25.63■■□□□ 1.69
PVT1-220ENST00000524165 YBX3P16989 372 aaKnown RBP eCLIP25.62■■□□□ 1.69
PVT1-220ENST00000524165 QRICH2Q9H0J4 1663 aa25.61■■□□□ 1.69
PVT1-220ENST00000524165 TUBGCP6Q96RT7 1819 aa25.61■■□□□ 1.69
PVT1-220ENST00000524165 KCNH5Q8NCM2 988 aa25.61■■□□□ 1.69
PVT1-220ENST00000524165 GPBP1L1Q9HC44 474 aaPredicted RBP25.61■■□□□ 1.69
PVT1-220ENST00000524165 KIAA1210Q9ULL0 1709 aa25.6■■□□□ 1.69
PVT1-220ENST00000524165 PNPLA7Q6ZV29 1317 aa25.6■■□□□ 1.69
PVT1-220ENST00000524165 SLC27A3Q5K4L6 730 aa25.58■■□□□ 1.69
PVT1-220ENST00000524165 CABP2Q9NPB3 220 aa25.57■■□□□ 1.68
PVT1-220ENST00000524165 CABP1Q9NZU7 370 aa25.56■■□□□ 1.68
PVT1-220ENST00000524165 ADCY9O60503 1353 aa25.55■■□□□ 1.68
PVT1-220ENST00000524165 TFCP2L1Q9NZI6 479 aa25.53■■□□□ 1.68
PVT1-220ENST00000524165 NFAT5O94916 1531 aa25.53■■□□□ 1.68
PVT1-220ENST00000524165 CENPJQ9HC77 1338 aaPredicted RBP25.49■■□□□ 1.67
PVT1-220ENST00000524165 IL2RBP14784 551 aa25.49■■□□□ 1.67
PVT1-220ENST00000524165 LY75O60449 1722 aa25.47■■□□□ 1.67
PVT1-220ENST00000524165 SOX12O15370 315 aa25.47■■□□□ 1.67
PVT1-220ENST00000524165 TTC21BQ7Z4L5 1316 aa25.46■■□□□ 1.67
PVT1-220ENST00000524165 ERBB3P21860 1342 aa25.45■■□□□ 1.66
PVT1-220ENST00000524165 TTC21AQ8NDW8 1320 aa25.45■■□□□ 1.66
PVT1-220ENST00000524165 ZNF526Q8TF50 670 aaPredicted RBP25.45■■□□□ 1.66
PVT1-220ENST00000524165 ZNF692Q9BU19 519 aaPredicted RBP25.45■■□□□ 1.66
PVT1-220ENST00000524165 NLRP2Q9NX02 1062 aa25.44■■□□□ 1.66
PVT1-220ENST00000524165 APLP1P51693 650 aa25.42■■□□□ 1.66
PVT1-220ENST00000524165 NBPF1Q3BBV0 1214 aa25.42■■□□□ 1.66
PVT1-220ENST00000524165 CD2APQ9Y5K6 639 aa25.42■■□□□ 1.66
PVT1-220ENST00000524165 RAB3GAP2Q9H2M9 1393 aa25.41■■□□□ 1.66
PVT1-220ENST00000524165 LTN1O94822 1766 aa25.39■■□□□ 1.66
PVT1-220ENST00000524165 KCNQ4P56696 695 aa25.39■■□□□ 1.66
PVT1-220ENST00000524165 KIF3CO14782 793 aa25.38■■□□□ 1.65
PVT1-220ENST00000524165 COL23A1Q86Y22 540 aaPredicted RBP25.37■■□□□ 1.65
PVT1-220ENST00000524165 DNAJC5GQ8N7S2 189 aa25.37■■□□□ 1.65
PVT1-220ENST00000524165 USP54Q70EL1 1684 aa25.36■■□□□ 1.65
PVT1-220ENST00000524165 MSH5O43196 834 aa25.36■■□□□ 1.65
PVT1-220ENST00000524165 DOT1LQ8TEK3 1739 aa25.35■■□□□ 1.65
PVT1-220ENST00000524165 EVC2Q86UK5 1308 aa25.35■■□□□ 1.65
PVT1-220ENST00000524165 ANKRD36BQ8N2N9 1353 aa25.34■■□□□ 1.65
PVT1-220ENST00000524165 ANKRD24Q8TF21 1146 aa25.33■■□□□ 1.65
PVT1-220ENST00000524165 MSL1Q68DK7 614 aa25.32■■□□□ 1.64
PVT1-220ENST00000524165 DDX54Q8TDD1 881 aaKnown RBP25.32■■□□□ 1.64
PVT1-220ENST00000524165 CCNL1Q9UK58 526 aaPredicted RBP25.32■■□□□ 1.64
PVT1-220ENST00000524165 PRIM1P49642 420 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms