RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
CTNNA1-234ENST00000522227 NLGN2Q8NFZ4 835 aa16.51■□□□□ 0.23
CTNNA1-234ENST00000522227 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
CTNNA1-234ENST00000522227 ATP10DQ9P241 1426 aa16.49■□□□□ 0.23
CTNNA1-234ENST00000522227 CPDO75976 1380 aa16.49■□□□□ 0.23
CTNNA1-234ENST00000522227 ACEP12821 1306 aa16.48■□□□□ 0.23
CTNNA1-234ENST00000522227 GCP02774 474 aa16.48■□□□□ 0.23
CTNNA1-234ENST00000522227 GPBP1L1Q9HC44 474 aaPredicted RBP16.48■□□□□ 0.23
CTNNA1-234ENST00000522227 YBX3P16989 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
CTNNA1-234ENST00000522227 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
CTNNA1-234ENST00000522227 ACSBG1Q96GR2 724 aa16.47■□□□□ 0.23
CTNNA1-234ENST00000522227 POLD1P28340 1107 aa16.46■□□□□ 0.23
CTNNA1-234ENST00000522227 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
CTNNA1-234ENST00000522227 USP19O94966 1318 aa16.45■□□□□ 0.22
CTNNA1-234ENST00000522227 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
CTNNA1-234ENST00000522227 ITSN1Q15811 1721 aa16.44■□□□□ 0.22
CTNNA1-234ENST00000522227 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
CTNNA1-234ENST00000522227 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
CTNNA1-234ENST00000522227 CDK19Q9BWU1 502 aa16.43■□□□□ 0.22
CTNNA1-234ENST00000522227 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
CTNNA1-234ENST00000522227 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
CTNNA1-234ENST00000522227 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
CTNNA1-234ENST00000522227 EXOC5O00471 708 aa16.4■□□□□ 0.22
CTNNA1-234ENST00000522227 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
CTNNA1-234ENST00000522227 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
CTNNA1-234ENST00000522227 LRRC4BQ9NT99 713 aa16.39■□□□□ 0.21
CTNNA1-234ENST00000522227 AXIN2Q9Y2T1 843 aa16.39■□□□□ 0.21
CTNNA1-234ENST00000522227 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
CTNNA1-234ENST00000522227 BCL9O00512 1426 aa16.38■□□□□ 0.21
CTNNA1-234ENST00000522227 NLRP6P59044 892 aa16.38■□□□□ 0.21
CTNNA1-234ENST00000522227 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
CTNNA1-234ENST00000522227 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
CTNNA1-234ENST00000522227 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
CTNNA1-234ENST00000522227 SOX12O15370 315 aa16.37■□□□□ 0.21
CTNNA1-234ENST00000522227 COL13A1Q5TAT6 717 aaPredicted RBP16.37■□□□□ 0.21
CTNNA1-234ENST00000522227 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
CTNNA1-234ENST00000522227 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
CTNNA1-234ENST00000522227 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
CTNNA1-234ENST00000522227 PLEKHG3A1L390 1219 aa16.35■□□□□ 0.21
CTNNA1-234ENST00000522227 MSH5O43196 834 aa16.35■□□□□ 0.21
CTNNA1-234ENST00000522227 KCNQ4P56696 695 aa16.35■□□□□ 0.21
CTNNA1-234ENST00000522227 SLC16A10Q8TF71 515 aa16.35■□□□□ 0.21
CTNNA1-234ENST00000522227 TFCP2L1Q9NZI6 479 aa16.35■□□□□ 0.21
CTNNA1-234ENST00000522227 WWC3Q9ULE0 1092 aa16.35■□□□□ 0.21
CTNNA1-234ENST00000522227 PNPLA7Q6ZV29 1317 aa16.35■□□□□ 0.21
CTNNA1-234ENST00000522227 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
CTNNA1-234ENST00000522227 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.2
CTNNA1-234ENST00000522227 USP6P35125 1406 aa16.33■□□□□ 0.2
CTNNA1-234ENST00000522227 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
CTNNA1-234ENST00000522227 KAT6BQ8WYB5 2073 aa16.33■□□□□ 0.2
CTNNA1-234ENST00000522227 APLP1P51693 650 aa16.32■□□□□ 0.2
CTNNA1-234ENST00000522227 MSL1Q68DK7 614 aa16.32■□□□□ 0.2
CTNNA1-234ENST00000522227 CARD10Q9BWT7 1032 aa16.32■□□□□ 0.2
CTNNA1-234ENST00000522227 KIF3CO14782 793 aa16.3■□□□□ 0.2
CTNNA1-234ENST00000522227 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
CTNNA1-234ENST00000522227 DNAJC5GQ8N7S2 189 aa16.3■□□□□ 0.2
CTNNA1-234ENST00000522227 DCAF11Q8TEB1 546 aa16.3■□□□□ 0.2
CTNNA1-234ENST00000522227 BTAF1O14981 1849 aa16.3■□□□□ 0.2
CTNNA1-234ENST00000522227 COL18A1P39060 1754 aa16.3■□□□□ 0.2
CTNNA1-234ENST00000522227 TNS2Q63HR2 1409 aa16.29■□□□□ 0.2
CTNNA1-234ENST00000522227 ADCY9O60503 1353 aa16.29■□□□□ 0.2
CTNNA1-234ENST00000522227 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
CTNNA1-234ENST00000522227 ARHGEF28Q8N1W1 1705 aaKnown RBP16.29■□□□□ 0.2
CTNNA1-234ENST00000522227 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
CTNNA1-234ENST00000522227 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
CTNNA1-234ENST00000522227 HTRA3P83110 453 aa16.27■□□□□ 0.2
CTNNA1-234ENST00000522227 CABP2Q9NPB3 220 aa16.27■□□□□ 0.2
CTNNA1-234ENST00000522227 SLIT3O75094 1523 aa16.27■□□□□ 0.2
CTNNA1-234ENST00000522227 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.19
CTNNA1-234ENST00000522227 PRELPP51888 382 aa16.26■□□□□ 0.19
CTNNA1-234ENST00000522227 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
CTNNA1-234ENST00000522227 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
CTNNA1-234ENST00000522227 COL24A1Q17RW2 1714 aa16.25■□□□□ 0.19
CTNNA1-234ENST00000522227 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
CTNNA1-234ENST00000522227 SLC27A3Q5K4L6 730 aa16.24■□□□□ 0.19
CTNNA1-234ENST00000522227 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
CTNNA1-234ENST00000522227 NLRP2Q9NX02 1062 aa16.24■□□□□ 0.19
CTNNA1-234ENST00000522227 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
CTNNA1-234ENST00000522227 CABP1Q9NZU7 370 aa16.23■□□□□ 0.19
CTNNA1-234ENST00000522227 QSER1Q2KHR3 1735 aa16.22■□□□□ 0.19
CTNNA1-234ENST00000522227 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.19
CTNNA1-234ENST00000522227 ABCC6O95255 1503 aa16.2■□□□□ 0.18
CTNNA1-234ENST00000522227 IL2RBP14784 551 aa16.2■□□□□ 0.18
CTNNA1-234ENST00000522227 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
CTNNA1-234ENST00000522227 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
CTNNA1-234ENST00000522227 TOMM70O94826 608 aa16.19■□□□□ 0.18
CTNNA1-234ENST00000522227 KCNH5Q8NCM2 988 aa16.19■□□□□ 0.18
CTNNA1-234ENST00000522227 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
CTNNA1-234ENST00000522227 KLRG1Q96E93 195 aa16.18■□□□□ 0.18
CTNNA1-234ENST00000522227 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
CTNNA1-234ENST00000522227 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
CTNNA1-234ENST00000522227 CCNL1Q9UK58 526 aaPredicted RBP16.17■□□□□ 0.18
CTNNA1-234ENST00000522227 NMRK2Q9NPI5 230 aa16.16■□□□□ 0.18
CTNNA1-234ENST00000522227 WDR90Q96KV7 1748 aa16.15■□□□□ 0.18
CTNNA1-234ENST00000522227 TTC21BQ7Z4L5 1316 aa16.14■□□□□ 0.17
CTNNA1-234ENST00000522227 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
CTNNA1-234ENST00000522227 SLC34A2O95436 690 aa16.12■□□□□ 0.17
CTNNA1-234ENST00000522227 ERBB3P21860 1342 aa16.12■□□□□ 0.17
CTNNA1-234ENST00000522227 NBPF1Q3BBV0 1214 aa16.11■□□□□ 0.17
CTNNA1-234ENST00000522227 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms