RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
SQLE-202ENST00000518604 WNT7AO00755 349 aa8.58□□□□□ -1.04
SQLE-202ENST00000518604 MAP7D1Q3KQU3 841 aa8.58□□□□□ -1.04
SQLE-202ENST00000518604 CFAP70Q5T0N1 1121 aa8.58□□□□□ -1.04
SQLE-202ENST00000518604 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
SQLE-202ENST00000518604 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
SQLE-202ENST00000518604 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
SQLE-202ENST00000518604 CDK15Q96Q40 435 aa8.58□□□□□ -1.04
SQLE-202ENST00000518604 ESPNB1AK53 854 aa8.57□□□□□ -1.04
SQLE-202ENST00000518604 TBC1D9Q6ZT07 1266 aa8.57□□□□□ -1.04
SQLE-202ENST00000518604 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
SQLE-202ENST00000518604 MAFBQ9Y5Q3 323 aaPredicted RBP8.57□□□□□ -1.04
SQLE-202ENST00000518604 SIAH2O43255 324 aa8.56□□□□□ -1.04
SQLE-202ENST00000518604 SKIP12755 728 aa8.56□□□□□ -1.04
SQLE-202ENST00000518604 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
SQLE-202ENST00000518604 PLEKHM2Q8IWE5 1019 aa8.56□□□□□ -1.04
SQLE-202ENST00000518604 PBXIP1Q96AQ6 731 aa8.56□□□□□ -1.04
SQLE-202ENST00000518604 ACIN1Q9UKV3 1341 aaKnown RBP8.55□□□□□ -1.04
SQLE-202ENST00000518604 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
SQLE-202ENST00000518604 KCTD15Q96SI1 283 aaPredicted RBP8.55□□□□□ -1.04
SQLE-202ENST00000518604 PRKD2Q9BZL6 878 aa8.55□□□□□ -1.04
SQLE-202ENST00000518604 PIK3CDO00329 1044 aa8.54□□□□□ -1.04
SQLE-202ENST00000518604 ZNF697Q5TEC3 545 aa8.54□□□□□ -1.04
SQLE-202ENST00000518604 VASH1Q7L8A9 365 aaPredicted RBP8.54□□□□□ -1.04
SQLE-202ENST00000518604 PLPP7Q8NBV4 271 aa8.54□□□□□ -1.04
SQLE-202ENST00000518604 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
SQLE-202ENST00000518604 SRPK2P78362 688 aaKnown RBP8.53□□□□□ -1.04
SQLE-202ENST00000518604 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
SQLE-202ENST00000518604 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
SQLE-202ENST00000518604 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
SQLE-202ENST00000518604 RFX1P22670 979 aa8.52□□□□□ -1.05
SQLE-202ENST00000518604 NR5A1Q13285 461 aa8.52□□□□□ -1.05
SQLE-202ENST00000518604 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
SQLE-202ENST00000518604 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
SQLE-202ENST00000518604 VRTNQ9H8Y1 702 aa8.52□□□□□ -1.05
SQLE-202ENST00000518604 GRM5P41594 1212 aa8.51□□□□□ -1.05
SQLE-202ENST00000518604 DHX9Q08211 1270 aaKnown RBP8.51□□□□□ -1.05
SQLE-202ENST00000518604 ARID5BQ14865 1188 aa8.51□□□□□ -1.05
SQLE-202ENST00000518604 TRAF7Q6Q0C0 670 aa8.51□□□□□ -1.05
SQLE-202ENST00000518604 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
SQLE-202ENST00000518604 DOLKQ9UPQ8 538 aa8.51□□□□□ -1.05
SQLE-202ENST00000518604 ADH1CP00326 375 aa8.5□□□□□ -1.05
SQLE-202ENST00000518604 EML3Q32P44 896 aa8.5□□□□□ -1.05
SQLE-202ENST00000518604 INTS6LQ5JSJ4 861 aaKnown RBP8.5□□□□□ -1.05
SQLE-202ENST00000518604 CCDC85AQ96PX6 553 aaPredicted RBP8.5□□□□□ -1.05
SQLE-202ENST00000518604 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
SQLE-202ENST00000518604 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
SQLE-202ENST00000518604 PDE4CQ08493 712 aa8.49□□□□□ -1.05
SQLE-202ENST00000518604 USP4Q13107 963 aa8.49□□□□□ -1.05
SQLE-202ENST00000518604 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
SQLE-202ENST00000518604 SNIP1Q8TAD8 396 aaKnown RBP8.49□□□□□ -1.05
SQLE-202ENST00000518604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.48□□□□□ -1.05
SQLE-202ENST00000518604 ATG7O95352 703 aa8.48□□□□□ -1.05
SQLE-202ENST00000518604 FOXC1Q12948 553 aa8.48□□□□□ -1.05
SQLE-202ENST00000518604 NCOA4Q13772 614 aa8.48□□□□□ -1.05
SQLE-202ENST00000518604 TRIM50Q86XT4 487 aa8.48□□□□□ -1.05
SQLE-202ENST00000518604 MKRN1Q9UHC7 482 aaKnown RBP8.48□□□□□ -1.05
SQLE-202ENST00000518604 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
SQLE-202ENST00000518604 PCDHB11Q9Y5F2 797 aa8.48□□□□□ -1.05
SQLE-202ENST00000518604 TLL2Q9Y6L7 1015 aa8.48□□□□□ -1.05
SQLE-202ENST00000518604 GDF9O60383 454 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 FSHRP23945 695 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 PRR20EP86478 221 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 PRR20CP86479 221 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 PRR20DP86480 221 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 PRR20BP86481 221 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 PRR20AP86496 221 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 TSGA10IPQ3SY00 556 aa8.47□□□□□ -1.05
SQLE-202ENST00000518604 ERVH48-1M5A8F1 160 aa8.46□□□□□ -1.06
SQLE-202ENST00000518604 ATP1A2P50993 1020 aa8.46□□□□□ -1.06
SQLE-202ENST00000518604 CCDC116Q8IYX3 515 aa8.46□□□□□ -1.06
SQLE-202ENST00000518604 DEPDC4Q8N2C3 294 aa8.46□□□□□ -1.06
SQLE-202ENST00000518604 FAM196BA6NMK8 535 aa8.45□□□□□ -1.06
SQLE-202ENST00000518604 ALDH1A1P00352 501 aa8.45□□□□□ -1.06
SQLE-202ENST00000518604 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
SQLE-202ENST00000518604 ELOAQ14241 798 aaKnown RBP8.45□□□□□ -1.06
SQLE-202ENST00000518604 OXLD1Q5BKU9 147 aa8.45□□□□□ -1.06
SQLE-202ENST00000518604 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
SQLE-202ENST00000518604 Q6ZNB5 142 aa8.45□□□□□ -1.06
SQLE-202ENST00000518604 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
SQLE-202ENST00000518604 WASF2Q9Y6W5 498 aa8.45□□□□□ -1.06
SQLE-202ENST00000518604 TTC24A2A3L6 582 aaPredicted RBP8.44□□□□□ -1.06
SQLE-202ENST00000518604 RAB15P59190 212 aa8.44□□□□□ -1.06
SQLE-202ENST00000518604 CDCA7Q9BWT1 371 aaPredicted RBP8.44□□□□□ -1.06
SQLE-202ENST00000518604 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
SQLE-202ENST00000518604 TOR4AQ9NXH8 423 aa8.44□□□□□ -1.06
SQLE-202ENST00000518604 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
SQLE-202ENST00000518604 EMILIN1Q9Y6C2 1016 aa8.44□□□□□ -1.06
SQLE-202ENST00000518604 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
SQLE-202ENST00000518604 RASA1P20936 1047 aa8.43□□□□□ -1.06
SQLE-202ENST00000518604 ERVK-9P63128 1117 aa8.43□□□□□ -1.06
SQLE-202ENST00000518604 CC2D2BQ6DHV5 1058 aa8.43□□□□□ -1.06
SQLE-202ENST00000518604 LARGE2Q8N3Y3 721 aa8.43□□□□□ -1.06
SQLE-202ENST00000518604 LCE2BO14633 110 aa8.42□□□□□ -1.06
SQLE-202ENST00000518604 MYT1Q01538 1121 aa8.42□□□□□ -1.06
SQLE-202ENST00000518604 CDCA8Q53HL2 280 aa8.42□□□□□ -1.06
SQLE-202ENST00000518604 PPP1R26Q5T8A7 1209 aaPredicted RBP8.42□□□□□ -1.06
SQLE-202ENST00000518604 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
SQLE-202ENST00000518604 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
SQLE-202ENST00000518604 USTQ9Y2C2 406 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms