RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
LINC00535-202ENST00000517785 LHX6Q9UPM6 363 aa8.86□□□□□ -0.99
LINC00535-202ENST00000517785 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
LINC00535-202ENST00000517785 A0A0G2JS52 829 aa8.84□□□□□ -0.99
LINC00535-202ENST00000517785 BAG6P46379 1132 aa8.84□□□□□ -0.99
LINC00535-202ENST00000517785 LSM11P83369 360 aaKnown RBP eCLIP8.84□□□□□ -0.99
LINC00535-202ENST00000517785 MYT1Q01538 1121 aa8.84□□□□□ -0.99
LINC00535-202ENST00000517785 EN1Q05925 392 aaPredicted RBP8.84□□□□□ -0.99
LINC00535-202ENST00000517785 SPHKAPQ2M3C7 1700 aa8.84□□□□□ -0.99
LINC00535-202ENST00000517785 ZNF326Q5BKZ1 582 aaKnown RBP8.84□□□□□ -0.99
LINC00535-202ENST00000517785 UNC5CLQ8IV45 518 aa8.84□□□□□ -0.99
LINC00535-202ENST00000517785 CCDC9Q9Y3X0 531 aaKnown RBP8.84□□□□□ -0.99
LINC00535-202ENST00000517785 VPS8Q8N3P4 1428 aa8.83□□□□□ -1
LINC00535-202ENST00000517785 ANKRD50Q9ULJ7 1429 aa8.83□□□□□ -1
LINC00535-202ENST00000517785 PTGER2P43116 358 aa8.83□□□□□ -1
LINC00535-202ENST00000517785 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
LINC00535-202ENST00000517785 KRT27Q7Z3Y8 459 aa8.83□□□□□ -1
LINC00535-202ENST00000517785 SLIT2O94813 1529 aa8.82□□□□□ -1
LINC00535-202ENST00000517785 PXDNQ92626 1479 aa8.82□□□□□ -1
LINC00535-202ENST00000517785 NUTM2FA1L443 756 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 FOXO3O43524 673 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 PBX2P40425 430 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 FOXK1P85037 733 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 FAM182BQ5T319 152 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 ROBO2Q9HCK4 1378 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 ADGRL2O95490 1459 aa8.81□□□□□ -1
LINC00535-202ENST00000517785 IQGAP3Q86VI3 1631 aa8.8□□□□□ -1
LINC00535-202ENST00000517785 USP32Q8NFA0 1604 aa8.8□□□□□ -1
LINC00535-202ENST00000517785 PTCD2Q8WV60 388 aaKnown RBP8.8□□□□□ -1
LINC00535-202ENST00000517785 GPHNQ9NQX3 736 aaPredicted RBP8.8□□□□□ -1
LINC00535-202ENST00000517785 PLCH1Q4KWH8 1693 aa8.8□□□□□ -1
LINC00535-202ENST00000517785 UTRNP46939 3433 aa8.8□□□□□ -1
LINC00535-202ENST00000517785 NPHP3Q7Z494 1330 aa8.8□□□□□ -1
LINC00535-202ENST00000517785 FAM50AQ14320 339 aaKnown RBP8.79□□□□□ -1
LINC00535-202ENST00000517785 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
LINC00535-202ENST00000517785 PLPP6Q8IY26 295 aa8.79□□□□□ -1
LINC00535-202ENST00000517785 AXIN2Q9Y2T1 843 aa8.79□□□□□ -1
LINC00535-202ENST00000517785 RGPD1P0DJD0 1748 aa8.79□□□□□ -1
LINC00535-202ENST00000517785 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
LINC00535-202ENST00000517785 HAP1P54257 671 aaPredicted RBP8.78□□□□□ -1
LINC00535-202ENST00000517785 DSG2Q14126 1118 aa8.78□□□□□ -1
LINC00535-202ENST00000517785 VPS72Q15906 364 aa8.78□□□□□ -1
LINC00535-202ENST00000517785 EZH2Q15910 746 aaKnown RBP8.78□□□□□ -1
LINC00535-202ENST00000517785 CABLES1Q8TDN4 633 aa8.78□□□□□ -1
LINC00535-202ENST00000517785 CAMTA1Q9Y6Y1 1673 aa8.78□□□□□ -1
LINC00535-202ENST00000517785 NEXMIFQ5QGS0 1516 aa8.77□□□□□ -1.01
LINC00535-202ENST00000517785 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
LINC00535-202ENST00000517785 IFFO2Q5TF58 517 aa8.77□□□□□ -1.01
LINC00535-202ENST00000517785 TNS1Q9HBL0 1735 aaKnown RBP8.77□□□□□ -1.01
LINC00535-202ENST00000517785 NWD2Q9ULI1 1742 aa8.75□□□□□ -1.01
LINC00535-202ENST00000517785 SPATA31A3Q5VYP0 1347 aa8.75□□□□□ -1.01
LINC00535-202ENST00000517785 NUP155O75694 1391 aa8.74□□□□□ -1.01
LINC00535-202ENST00000517785 ABCA3Q99758 1704 aa8.74□□□□□ -1.01
LINC00535-202ENST00000517785 CDC42BPGQ6DT37 1551 aa8.74□□□□□ -1.01
LINC00535-202ENST00000517785 CLTCL1P53675 1640 aa8.74□□□□□ -1.01
LINC00535-202ENST00000517785 ONECUT3O60422 494 aaPredicted RBP8.74□□□□□ -1.01
LINC00535-202ENST00000517785 PPP1R1BQ9UD71 204 aaPredicted RBP8.74□□□□□ -1.01
LINC00535-202ENST00000517785 HFM1A2PYH4 1435 aa8.73□□□□□ -1.01
LINC00535-202ENST00000517785 ARHGAP33O14559 1287 aa8.73□□□□□ -1.01
LINC00535-202ENST00000517785 LMOD2Q6P5Q4 547 aa8.73□□□□□ -1.01
LINC00535-202ENST00000517785 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
LINC00535-202ENST00000517785 NRAPQ86VF7 1730 aa8.73□□□□□ -1.01
LINC00535-202ENST00000517785 LRPPRCP42704 1394 aaKnown RBP8.73□□□□□ -1.01
LINC00535-202ENST00000517785 NAIPQ13075 1403 aa8.72□□□□□ -1.01
LINC00535-202ENST00000517785 TRIM37O94972 964 aa8.72□□□□□ -1.01
LINC00535-202ENST00000517785 KRT28Q7Z3Y7 464 aa8.72□□□□□ -1.01
LINC00535-202ENST00000517785 KIF1BO60333 1816 aa8.72□□□□□ -1.01
LINC00535-202ENST00000517785 DISP2A7MBM2 1401 aa8.71□□□□□ -1.01
LINC00535-202ENST00000517785 NUP188Q5SRE5 1749 aa8.71□□□□□ -1.01
LINC00535-202ENST00000517785 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.01
LINC00535-202ENST00000517785 ADGRB2O60241 1585 aa8.71□□□□□ -1.02
LINC00535-202ENST00000517785 FAM83GA6ND36 823 aa8.71□□□□□ -1.02
LINC00535-202ENST00000517785 TBC1D12O60347 775 aa8.71□□□□□ -1.02
LINC00535-202ENST00000517785 CAMKK2Q96RR4 588 aa8.71□□□□□ -1.02
LINC00535-202ENST00000517785 RYDENQ9NUL5 291 aaKnown RBP8.71□□□□□ -1.02
LINC00535-202ENST00000517785 CCDC144AA2RUR9 1427 aa8.71□□□□□ -1.02
LINC00535-202ENST00000517785 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.02
LINC00535-202ENST00000517785 KIF1AQ12756 1690 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 RREB1Q92766 1687 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 APBA3O96018 575 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 ADGRD1Q6QNK2 874 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 WAPLQ7Z5K2 1190 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 CRISPLD2Q9H0B8 497 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 BTG4Q9NY30 223 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 STK26Q9P289 416 aa8.7□□□□□ -1.02
LINC00535-202ENST00000517785 FMN2Q9NZ56 1722 aa8.69□□□□□ -1.02
LINC00535-202ENST00000517785 SPON1Q9HCB6 807 aa8.69□□□□□ -1.02
LINC00535-202ENST00000517785 PLEKHH1Q9ULM0 1364 aa8.69□□□□□ -1.02
LINC00535-202ENST00000517785 ITGAEP38570 1179 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 PSEN2P49810 448 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 C1QTNF8P60827 252 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 DMRTA1Q5VZB9 504 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 OXER1Q8TDS5 423 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 NINLQ9Y2I6 1382 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 PRAG1Q86YV5 1406 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 THSD7AQ9UPZ6 1657 aa8.68□□□□□ -1.02
LINC00535-202ENST00000517785 KCNQ2O43526 872 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms