RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 CCDC85AQ96PX6 553 aaPredicted RBP15.73■□□□□ 0.11
PRDM16-208ENST00000514189 CHMP4CQ96CF2 233 aa15.73■□□□□ 0.11
PRDM16-208ENST00000514189 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
PRDM16-208ENST00000514189 ZNF771Q7L3S4 317 aaPredicted RBP15.73■□□□□ 0.11
PRDM16-208ENST00000514189 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
PRDM16-208ENST00000514189 RAPGEF4Q8WZA2 1011 aa15.73■□□□□ 0.11
PRDM16-208ENST00000514189 DDX58O95786 925 aaKnown RBP15.72■□□□□ 0.11
PRDM16-208ENST00000514189 C8orf34Q49A92 452 aa15.72■□□□□ 0.11
PRDM16-208ENST00000514189 ESCO1Q5FWF5 840 aa15.72■□□□□ 0.11
PRDM16-208ENST00000514189 GPATCH8Q9UKJ3 1502 aaKnown RBP15.72■□□□□ 0.11
PRDM16-208ENST00000514189 LRPPRCP42704 1394 aaKnown RBP15.72■□□□□ 0.11
PRDM16-208ENST00000514189 NFE2L2Q16236 605 aa15.72■□□□□ 0.11
PRDM16-208ENST00000514189 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
PRDM16-208ENST00000514189 FCHSD2O94868 740 aa15.71■□□□□ 0.11
PRDM16-208ENST00000514189 TNNT3P45378 269 aaPredicted RBP15.71■□□□□ 0.11
PRDM16-208ENST00000514189 EVA1CP58658 441 aa15.71■□□□□ 0.11
PRDM16-208ENST00000514189 IDI1Q13907 227 aa15.71■□□□□ 0.11
PRDM16-208ENST00000514189 CNTROBQ8N137 903 aa15.71■□□□□ 0.11
PRDM16-208ENST00000514189 GPRASP1Q5JY77 1395 aa15.71■□□□□ 0.1
PRDM16-208ENST00000514189 TPD52L1Q16890 204 aaPredicted RBP15.7■□□□□ 0.1
PRDM16-208ENST00000514189 CCDC141Q6ZP82 1450 aa15.7■□□□□ 0.1
PRDM16-208ENST00000514189 TSPY26PQ9H489 355 aa15.7■□□□□ 0.1
PRDM16-208ENST00000514189 FYB1O15117 783 aa15.7■□□□□ 0.1
PRDM16-208ENST00000514189 DTNBO60941 627 aa15.7■□□□□ 0.1
PRDM16-208ENST00000514189 ANXA1P04083 346 aa15.69■□□□□ 0.1
PRDM16-208ENST00000514189 NFXL1Q6ZNB6 911 aa15.69■□□□□ 0.1
PRDM16-208ENST00000514189 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
PRDM16-208ENST00000514189 RAD21O60216 631 aa15.69■□□□□ 0.1
PRDM16-208ENST00000514189 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
PRDM16-208ENST00000514189 NKTRP30414 1462 aaKnown RBP15.69■□□□□ 0.1
PRDM16-208ENST00000514189 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
PRDM16-208ENST00000514189 NUDT16Q96DE0 195 aaKnown RBP15.68■□□□□ 0.1
PRDM16-208ENST00000514189 MBD3O95983 291 aa15.68■□□□□ 0.1
PRDM16-208ENST00000514189 TTLL5Q6EMB2 1281 aa15.68■□□□□ 0.1
PRDM16-208ENST00000514189 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
PRDM16-208ENST00000514189 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
PRDM16-208ENST00000514189 RBM27Q9P2N5 1060 aaKnown RBP15.68■□□□□ 0.1
PRDM16-208ENST00000514189 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
PRDM16-208ENST00000514189 TESK2Q96S53 571 aa15.68■□□□□ 0.1
PRDM16-208ENST00000514189 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.68■□□□□ 0.1
PRDM16-208ENST00000514189 CAMK4Q16566 473 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 SAMD9Q5K651 1589 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 HSP90AB4PQ58FF6 505 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 CCDC173Q0VFZ6 552 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 TRDNQ13061 729 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 ZNF530Q6P9A1 599 aaPredicted RBP15.67■□□□□ 0.1
PRDM16-208ENST00000514189 JAKMIP1Q96N16 626 aaKnown RBP15.67■□□□□ 0.1
PRDM16-208ENST00000514189 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
PRDM16-208ENST00000514189 LARP1BQ659C4 914 aaKnown RBP15.67■□□□□ 0.1
PRDM16-208ENST00000514189 CPLX2Q6PUV4 134 aaKnown RBP15.67■□□□□ 0.1
PRDM16-208ENST00000514189 GAS2L2Q8NHY3 880 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 CCDC39Q9UFE4 941 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 CCDC61Q9Y6R9 512 aa15.67■□□□□ 0.1
PRDM16-208ENST00000514189 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
PRDM16-208ENST00000514189 SYNE3Q6ZMZ3 975 aa15.66■□□□□ 0.1
PRDM16-208ENST00000514189 ASXL2Q76L83 1435 aa15.66■□□□□ 0.1
PRDM16-208ENST00000514189 CARD14Q9BXL6 1004 aa15.65■□□□□ 0.1
PRDM16-208ENST00000514189 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
PRDM16-208ENST00000514189 ZC3H6P61129 1189 aaKnown RBP15.65■□□□□ 0.1
PRDM16-208ENST00000514189 FILIP1Q7Z7B0 1213 aa15.65■□□□□ 0.1
PRDM16-208ENST00000514189 RALYLQ86SE5 291 aaKnown RBP15.65■□□□□ 0.1
PRDM16-208ENST00000514189 AACSQ86V21 672 aa15.65■□□□□ 0.1
PRDM16-208ENST00000514189 TPM3P06753 285 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 XRCC6P12956 609 aaKnown RBP eCLIP15.64■□□□□ 0.09
PRDM16-208ENST00000514189 PDILTQ8N807 584 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 RTEL1-TNFRSF6BF6WH68 1400 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 VPS53Q5VIR6 699 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 CCDC83Q8IWF9 413 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 FAM177A1Q8N128 213 aaPredicted RBP15.64■□□□□ 0.09
PRDM16-208ENST00000514189 CCDC34Q96HJ3 373 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 SPG7Q9UQ90 795 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 ADGRL1O94910 1474 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 TRIM29Q14134 588 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 MARCH6O60337 910 aa15.64■□□□□ 0.09
PRDM16-208ENST00000514189 RRP12Q5JTH9 1297 aaKnown RBP15.64■□□□□ 0.09
PRDM16-208ENST00000514189 CYP46A1Q9Y6A2 500 aa15.63■□□□□ 0.09
PRDM16-208ENST00000514189 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
PRDM16-208ENST00000514189 NOC3LQ8WTT2 800 aaKnown RBP15.63■□□□□ 0.09
PRDM16-208ENST00000514189 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
PRDM16-208ENST00000514189 SLC52A1Q9NWF4 448 aa15.63■□□□□ 0.09
PRDM16-208ENST00000514189 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
PRDM16-208ENST00000514189 RPAP2Q8IXW5 612 aaPredicted RBP15.63■□□□□ 0.09
PRDM16-208ENST00000514189 CT47B1P0C2W7 299 aaPredicted RBP15.62■□□□□ 0.09
PRDM16-208ENST00000514189 CASTP20810 708 aaKnown RBP15.62■□□□□ 0.09
PRDM16-208ENST00000514189 TSPYL6Q8N831 410 aa15.62■□□□□ 0.09
PRDM16-208ENST00000514189 FANCAO15360 1455 aa15.62■□□□□ 0.09
PRDM16-208ENST00000514189 UQCRHLA0A096LP55 91 aa15.62■□□□□ 0.09
PRDM16-208ENST00000514189 UQCRHP07919 91 aa15.62■□□□□ 0.09
PRDM16-208ENST00000514189 SKIDA1Q1XH10 827 aa15.62■□□□□ 0.09
PRDM16-208ENST00000514189 BOLA2Q9H3K6 86 aa15.62■□□□□ 0.09
PRDM16-208ENST00000514189 TAF7Q15545 349 aaPredicted RBP15.61■□□□□ 0.09
PRDM16-208ENST00000514189 TCEANC2Q96MN5 208 aa15.61■□□□□ 0.09
PRDM16-208ENST00000514189 SMC2O95347 1197 aa15.61■□□□□ 0.09
PRDM16-208ENST00000514189 PRDM10Q9NQV6 1147 aa15.61■□□□□ 0.09
PRDM16-208ENST00000514189 MBIPQ9NS73 344 aa15.61■□□□□ 0.09
PRDM16-208ENST00000514189 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
PRDM16-208ENST00000514189 CCDC8Q9H0W5 538 aaPredicted RBP15.61■□□□□ 0.09
PRDM16-208ENST00000514189 TFIP11Q9UBB9 837 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms