RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 TMEM57Q8N5G2 664 aa15.9■□□□□ 0.14
SDHA-216ENST00000514027 NUDT16Q96DE0 195 aaKnown RBP15.9■□□□□ 0.14
SDHA-216ENST00000514027 PHACTR3Q96KR7 559 aa15.9■□□□□ 0.14
SDHA-216ENST00000514027 UPF2Q9HAU5 1272 aaKnown RBP15.89■□□□□ 0.13
SDHA-216ENST00000514027 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
SDHA-216ENST00000514027 RRS1Q15050 365 aaKnown RBP15.88■□□□□ 0.13
SDHA-216ENST00000514027 NFE2L2Q16236 605 aa15.88■□□□□ 0.13
SDHA-216ENST00000514027 COG3Q96JB2 828 aa15.88■□□□□ 0.13
SDHA-216ENST00000514027 IPO8O15397 1037 aaKnown RBP15.87■□□□□ 0.13
SDHA-216ENST00000514027 RRAGDQ9NQL2 400 aaPredicted RBP15.87■□□□□ 0.13
SDHA-216ENST00000514027 CPS1P31327 1500 aa15.86■□□□□ 0.13
SDHA-216ENST00000514027 IL13P35225 146 aa15.86■□□□□ 0.13
SDHA-216ENST00000514027 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
SDHA-216ENST00000514027 CDK12Q9NYV4 1490 aaPredicted RBP15.85■□□□□ 0.13
SDHA-216ENST00000514027 TNRQ92752 1358 aa15.85■□□□□ 0.13
SDHA-216ENST00000514027 HDGFP51858 240 aaKnown RBP15.85■□□□□ 0.13
SDHA-216ENST00000514027 ALDH1L2Q3SY69 923 aa15.85■□□□□ 0.13
SDHA-216ENST00000514027 ITSN1Q15811 1721 aa15.85■□□□□ 0.13
SDHA-216ENST00000514027 KNDC1Q76NI1 1749 aa15.84■□□□□ 0.13
SDHA-216ENST00000514027 ELL2O00472 640 aaPredicted RBP15.84■□□□□ 0.13
SDHA-216ENST00000514027 MON2Q7Z3U7 1717 aa15.84■□□□□ 0.13
SDHA-216ENST00000514027 NUTM2FA1L443 756 aa15.84■□□□□ 0.13
SDHA-216ENST00000514027 HSP90AA1P07900 732 aaKnown RBP15.84■□□□□ 0.13
SDHA-216ENST00000514027 HDAC1Q13547 482 aaPredicted RBP15.84■□□□□ 0.13
SDHA-216ENST00000514027 BECN1Q14457 450 aa15.84■□□□□ 0.13
SDHA-216ENST00000514027 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.12
SDHA-216ENST00000514027 ZBTB40Q9NUA8 1239 aa15.83■□□□□ 0.12
SDHA-216ENST00000514027 TSPYL6Q8N831 410 aa15.82■□□□□ 0.12
SDHA-216ENST00000514027 GNAI1P63096 354 aa15.82■□□□□ 0.12
SDHA-216ENST00000514027 PRR36Q9H6K5 1346 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 AATKQ6ZMQ8 1374 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 AKAP12Q02952 1782 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
SDHA-216ENST00000514027 TBC1D32Q96NH3 1257 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 SLKQ9H2G2 1235 aaPredicted RBP15.81■□□□□ 0.12
SDHA-216ENST00000514027 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 ROBO2Q9HCK4 1378 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 TMEM2Q9UHN6 1383 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 TECPR2O15040 1411 aa15.81■□□□□ 0.12
SDHA-216ENST00000514027 FAM83GA6ND36 823 aa15.8■□□□□ 0.12
SDHA-216ENST00000514027 NAP1L5Q96NT1 182 aaPredicted RBP15.8■□□□□ 0.12
SDHA-216ENST00000514027 IFT57Q9NWB7 429 aa15.8■□□□□ 0.12
SDHA-216ENST00000514027 C3P01024 1663 aa15.8■□□□□ 0.12
SDHA-216ENST00000514027 UBR1Q8IWV7 1749 aa15.8■□□□□ 0.12
SDHA-216ENST00000514027 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
SDHA-216ENST00000514027 MFAP1P55081 439 aaKnown RBP15.8■□□□□ 0.12
SDHA-216ENST00000514027 RBM10P98175 930 aaKnown RBP15.8■□□□□ 0.12
SDHA-216ENST00000514027 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
SDHA-216ENST00000514027 VAMP4O75379 141 aa15.79■□□□□ 0.12
SDHA-216ENST00000514027 DCTN1Q14203 1278 aa15.79■□□□□ 0.12
SDHA-216ENST00000514027 LMOD3Q0VAK6 560 aa15.79■□□□□ 0.12
SDHA-216ENST00000514027 SMC5Q8IY18 1101 aa15.79■□□□□ 0.12
SDHA-216ENST00000514027 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
SDHA-216ENST00000514027 C1orf115Q9H7X2 142 aa15.79■□□□□ 0.12
SDHA-216ENST00000514027 SOX12O15370 315 aa15.78■□□□□ 0.12
SDHA-216ENST00000514027 TWISTNBQ3B726 338 aaPredicted RBP15.78■□□□□ 0.12
SDHA-216ENST00000514027 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
SDHA-216ENST00000514027 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
SDHA-216ENST00000514027 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
SDHA-216ENST00000514027 LNPKQ9C0E8 428 aa15.78■□□□□ 0.12
SDHA-216ENST00000514027 ACEP12821 1306 aa15.76■□□□□ 0.11
SDHA-216ENST00000514027 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
SDHA-216ENST00000514027 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
SDHA-216ENST00000514027 ADAMTS13Q76LX8 1427 aa15.76■□□□□ 0.11
SDHA-216ENST00000514027 ZNF853P0CG23 659 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 C8orf58Q8NAV2 365 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 SLC26A8Q96RN1 970 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.75■□□□□ 0.11
SDHA-216ENST00000514027 TTC21BQ7Z4L5 1316 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 LTKP29376 864 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
SDHA-216ENST00000514027 FGD1P98174 961 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
SDHA-216ENST00000514027 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
SDHA-216ENST00000514027 NUCB1Q02818 461 aa15.74■□□□□ 0.11
SDHA-216ENST00000514027 EIF4A2Q14240 407 aaKnown RBP15.74■□□□□ 0.11
SDHA-216ENST00000514027 TBC1D2Q9BYX2 928 aa15.74■□□□□ 0.11
SDHA-216ENST00000514027 C22orf23Q9BZE7 217 aa15.74■□□□□ 0.11
SDHA-216ENST00000514027 ZBTB7BO15156 539 aaPredicted RBP15.74■□□□□ 0.11
SDHA-216ENST00000514027 SPRYD3Q8NCJ5 442 aa15.74■□□□□ 0.11
SDHA-216ENST00000514027 NRKQ7Z2Y5 1582 aa15.73■□□□□ 0.11
SDHA-216ENST00000514027 CHD1LQ86WJ1 897 aa15.73■□□□□ 0.11
SDHA-216ENST00000514027 ARHGAP45Q92619 1136 aa15.73■□□□□ 0.11
SDHA-216ENST00000514027 ANKRD45Q5TZF3 282 aa15.72■□□□□ 0.11
SDHA-216ENST00000514027 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
SDHA-216ENST00000514027 PLEKHG1Q9ULL1 1385 aa15.72■□□□□ 0.11
SDHA-216ENST00000514027 TOPAZ1Q8N9V7 1692 aa15.72■□□□□ 0.11
SDHA-216ENST00000514027 ABCC4O15439 1325 aa15.72■□□□□ 0.11
SDHA-216ENST00000514027 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
SDHA-216ENST00000514027 MCM10Q7L590 875 aa15.71■□□□□ 0.1
SDHA-216ENST00000514027 USP6P35125 1406 aa15.7■□□□□ 0.1
SDHA-216ENST00000514027 PIK3R4Q99570 1358 aa15.7■□□□□ 0.1
SDHA-216ENST00000514027 CLCN1P35523 988 aa15.7■□□□□ 0.1
SDHA-216ENST00000514027 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
SDHA-216ENST00000514027 OVOS2A0A0J9YW53 1432 aa15.7■□□□□ 0.1
SDHA-216ENST00000514027 OVOS2Q6IE36 1432 aa15.7■□□□□ 0.1
SDHA-216ENST00000514027 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
SDHA-216ENST00000514027 API5Q9BZZ5 524 aaKnown RBP15.7■□□□□ 0.1
SDHA-216ENST00000514027 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms