RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 FSHRP23945 695 aa11.48□□□□□ -0.57
LINC01088-208ENST00000511895 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
LINC01088-208ENST00000511895 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
LINC01088-208ENST00000511895 TRAK2O60296 914 aa11.47□□□□□ -0.57
LINC01088-208ENST00000511895 RAB15P59190 212 aa11.47□□□□□ -0.57
LINC01088-208ENST00000511895 LAPTM4AQ15012 233 aa11.47□□□□□ -0.57
LINC01088-208ENST00000511895 SMPD1P17405 629 aa11.46□□□□□ -0.57
LINC01088-208ENST00000511895 SOX11P35716 441 aa11.46□□□□□ -0.57
LINC01088-208ENST00000511895 PKDCCQ504Y2 493 aa11.45□□□□□ -0.58
LINC01088-208ENST00000511895 TIMELESSQ9UNS1 1208 aa11.45□□□□□ -0.58
LINC01088-208ENST00000511895 GRM5P41594 1212 aa11.44□□□□□ -0.58
LINC01088-208ENST00000511895 NR5A1Q13285 461 aa11.44□□□□□ -0.58
LINC01088-208ENST00000511895 NNTQ13423 1086 aa11.44□□□□□ -0.58
LINC01088-208ENST00000511895 ZNF777Q9ULD5 760 aaPredicted RBP11.44□□□□□ -0.58
LINC01088-208ENST00000511895 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
LINC01088-208ENST00000511895 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
LINC01088-208ENST00000511895 CEP126Q9P2H0 1117 aa11.42□□□□□ -0.58
LINC01088-208ENST00000511895 SLFNL1Q499Z3 407 aa11.41□□□□□ -0.58
LINC01088-208ENST00000511895 INTS6LQ5JSJ4 861 aaKnown RBP11.41□□□□□ -0.58
LINC01088-208ENST00000511895 CCDC116Q8IYX3 515 aa11.41□□□□□ -0.58
LINC01088-208ENST00000511895 HPS1Q92902 700 aa11.41□□□□□ -0.58
LINC01088-208ENST00000511895 ALG2Q9H553 416 aa11.41□□□□□ -0.58
LINC01088-208ENST00000511895 DGAT1O75907 488 aa11.4□□□□□ -0.58
LINC01088-208ENST00000511895 NR3C2P08235 984 aa11.4□□□□□ -0.58
LINC01088-208ENST00000511895 RNF20Q5VTR2 975 aa11.4□□□□□ -0.58
LINC01088-208ENST00000511895 GLMNQ92990 594 aa11.4□□□□□ -0.58
LINC01088-208ENST00000511895 DHX9Q08211 1270 aaKnown RBP11.39□□□□□ -0.59
LINC01088-208ENST00000511895 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
LINC01088-208ENST00000511895 ESPNB1AK53 854 aa11.38□□□□□ -0.59
LINC01088-208ENST00000511895 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
LINC01088-208ENST00000511895 WDR4P57081 412 aaKnown RBP11.37□□□□□ -0.59
LINC01088-208ENST00000511895 Q6ZNB5 142 aa11.37□□□□□ -0.59
LINC01088-208ENST00000511895 RNF135Q8IUD6 432 aa11.37□□□□□ -0.59
LINC01088-208ENST00000511895 ADAMTS19Q8TE59 1207 aa11.37□□□□□ -0.59
LINC01088-208ENST00000511895 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
LINC01088-208ENST00000511895 PGPEP1Q9NXJ5 209 aa11.36□□□□□ -0.59
LINC01088-208ENST00000511895 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
LINC01088-208ENST00000511895 ERVH48-1M5A8F1 160 aa11.35□□□□□ -0.59
LINC01088-208ENST00000511895 PCDHB11Q9Y5F2 797 aa11.35□□□□□ -0.59
LINC01088-208ENST00000511895 ARID3CA6NKF2 412 aa11.34□□□□□ -0.59
LINC01088-208ENST00000511895 ZIC2O95409 532 aaPredicted RBP11.34□□□□□ -0.59
LINC01088-208ENST00000511895 TMPRSS4Q9NRS4 437 aa11.34□□□□□ -0.59
LINC01088-208ENST00000511895 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
LINC01088-208ENST00000511895 CAPN5O15484 640 aaPredicted RBP11.32□□□□□ -0.6
LINC01088-208ENST00000511895 AVPP01185 164 aa11.32□□□□□ -0.6
LINC01088-208ENST00000511895 SKIP12755 728 aa11.32□□□□□ -0.6
LINC01088-208ENST00000511895 ITPKCQ96DU7 683 aa11.32□□□□□ -0.6
LINC01088-208ENST00000511895 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
LINC01088-208ENST00000511895 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
LINC01088-208ENST00000511895 PIK3CDO00329 1044 aa11.31□□□□□ -0.6
LINC01088-208ENST00000511895 TIMP2P16035 220 aa11.31□□□□□ -0.6
LINC01088-208ENST00000511895 PHTF2Q8N3S3 785 aa11.31□□□□□ -0.6
LINC01088-208ENST00000511895 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
LINC01088-208ENST00000511895 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
LINC01088-208ENST00000511895 ESF1Q9H501 851 aaKnown RBP11.31□□□□□ -0.6
LINC01088-208ENST00000511895 AXIN1O15169 862 aa11.3□□□□□ -0.6
LINC01088-208ENST00000511895 MYT1Q01538 1121 aa11.3□□□□□ -0.6
LINC01088-208ENST00000511895 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
LINC01088-208ENST00000511895 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
LINC01088-208ENST00000511895 CYLDQ9NQC7 956 aa11.3□□□□□ -0.6
LINC01088-208ENST00000511895 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
LINC01088-208ENST00000511895 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
LINC01088-208ENST00000511895 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
LINC01088-208ENST00000511895 PLPP7Q8NBV4 271 aa11.29□□□□□ -0.6
LINC01088-208ENST00000511895 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
LINC01088-208ENST00000511895 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
LINC01088-208ENST00000511895 ST8SIA5O15466 376 aa11.27□□□□□ -0.61
LINC01088-208ENST00000511895 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.61
LINC01088-208ENST00000511895 CDCA7Q9BWT1 371 aaPredicted RBP11.27□□□□□ -0.61
LINC01088-208ENST00000511895 MYCP01106 439 aaPredicted RBP11.26□□□□□ -0.61
LINC01088-208ENST00000511895 CBLBQ13191 982 aa11.26□□□□□ -0.61
LINC01088-208ENST00000511895 MAP7D1Q3KQU3 841 aa11.26□□□□□ -0.61
LINC01088-208ENST00000511895 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
LINC01088-208ENST00000511895 CC2D2BQ6DHV5 1058 aa11.25□□□□□ -0.61
LINC01088-208ENST00000511895 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
LINC01088-208ENST00000511895 CCDC97Q96F63 343 aaPredicted RBP11.25□□□□□ -0.61
LINC01088-208ENST00000511895 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
LINC01088-208ENST00000511895 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
LINC01088-208ENST00000511895 ATP9BO43861 1147 aa11.24□□□□□ -0.61
LINC01088-208ENST00000511895 SCTRP47872 440 aa11.24□□□□□ -0.61
LINC01088-208ENST00000511895 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
LINC01088-208ENST00000511895 CRIPAKQ8N1N5 446 aa11.24□□□□□ -0.61
LINC01088-208ENST00000511895 DEPDC4Q8N2C3 294 aa11.24□□□□□ -0.61
LINC01088-208ENST00000511895 TFIP11Q9UBB9 837 aaKnown RBP11.24□□□□□ -0.61
LINC01088-208ENST00000511895 LILRA1O75019 489 aa11.23□□□□□ -0.61
LINC01088-208ENST00000511895 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
LINC01088-208ENST00000511895 USP4Q13107 963 aa11.23□□□□□ -0.61
LINC01088-208ENST00000511895 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
LINC01088-208ENST00000511895 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
LINC01088-208ENST00000511895 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
LINC01088-208ENST00000511895 UPP2O95045 317 aa11.22□□□□□ -0.61
LINC01088-208ENST00000511895 BMP1P13497 986 aa11.22□□□□□ -0.61
LINC01088-208ENST00000511895 EML3Q32P44 896 aa11.22□□□□□ -0.61
LINC01088-208ENST00000511895 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
LINC01088-208ENST00000511895 ADD1P35611 737 aaKnown RBP11.21□□□□□ -0.61
LINC01088-208ENST00000511895 NCOA4Q13772 614 aa11.21□□□□□ -0.61
LINC01088-208ENST00000511895 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
LINC01088-208ENST00000511895 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
LINC01088-208ENST00000511895 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
LINC01088-208ENST00000511895 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms