RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 THSD4Q6ZMP0 1018 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 UNC93B1Q9H1C4 597 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 ZPR1O75312 459 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 EML3Q32P44 896 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 CDCA7Q9BWT1 371 aaPredicted RBP9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 TLL1O43897 1013 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
HMGB1P3-201ENST00000502802 TXNDC2Q86VQ3 553 aa9□□□□□ -0.97
HMGB1P3-201ENST00000502802 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
HMGB1P3-201ENST00000502802 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
HMGB1P3-201ENST00000502802 FAM69CQ0P6D2 419 aa8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 PHLDB3Q6NSJ2 640 aa8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 CLP1Q92989 425 aaKnown RBP8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 SSFA2P28290 1259 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 SH3RF1Q7Z6J0 888 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 MTRQ99707 1265 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 SLC6A16Q9GZN6 736 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 NOD1Q9Y239 953 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 TSGA10IPQ3SY00 556 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 MAGEB6P1A0A0J9YX57 407 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 RBM25P49756 843 aaKnown RBP8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 DPYDQ12882 1025 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 SWI5Q1ZZU3 235 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 DOLKQ9UPQ8 538 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 CLDN10P78369 228 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 BPHLQ86WA6 291 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 BAP1Q92560 729 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 CCDC85AQ96PX6 553 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 IL21Q9HBE4 155 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 AMOTL2Q9Y2J4 779 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 AGERQ15109 404 aa8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ERFEQ4G0M1 354 aa8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF428Q96B54 188 aa8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF594Q96JF6 807 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ATP2B4P23634 1241 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 OXLD1Q5BKU9 147 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF516Q92618 1163 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZBTB7BO15156 539 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 SIX5Q8N196 739 aa8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 FOXJ1Q92949 421 aa8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 DKK1O94907 266 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 GTF2IP78347 998 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 LINC01559Q495D7 138 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 SLC10A4Q96EP9 437 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 RBM19Q9Y4C8 960 aaKnown RBP8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
HMGB1P3-201ENST00000502802 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
HMGB1P3-201ENST00000502802 POTEMA6NI47 508 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 S1PR4O95977 384 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 PTPN5P54829 565 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 SEC13P55735 322 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 CCDC125Q86Z20 511 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 C1orf216Q8TAB5 229 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 FCF1Q9Y324 198 aaKnown RBP8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 SOWAHDA6NJG2 315 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 E9PSI1 815 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 USP4Q13107 963 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 C1QTNF2Q9BXJ5 285 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 CDV3Q9UKY7 258 aaKnown RBP8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 ESPNB1AK53 854 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 SEPT12Q8IYM1 358 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 PCDHB11Q9Y5F2 797 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 PCDHGA11Q9Y5H2 935 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 SERPINB4P48594 390 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 SH3BP2P78314 561 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 TRMT44Q8IYL2 757 aaKnown RBP8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
HMGB1P3-201ENST00000502802 PRMT3O60678 531 aa8.85□□□□□ -0.99
HMGB1P3-201ENST00000502802 PSME1Q06323 249 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms