RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TMEM94Q12767 1356 aa10.65□□□□□ -0.71
PDZRN3-212ENST00000498048 APAF1O14727 1248 aa10.64□□□□□ -0.71
PDZRN3-212ENST00000498048 PPM1GO15355 546 aaPredicted RBP10.64□□□□□ -0.71
PDZRN3-212ENST00000498048 PROSER2Q86WR7 435 aaPredicted RBP10.64□□□□□ -0.71
PDZRN3-212ENST00000498048 FLT4P35916 1363 aa10.64□□□□□ -0.71
PDZRN3-212ENST00000498048 POLKQ9UBT6 870 aa10.63□□□□□ -0.71
PDZRN3-212ENST00000498048 SBNO1A3KN83 1393 aa10.63□□□□□ -0.71
PDZRN3-212ENST00000498048 RTL1A6NKG5 1358 aa10.63□□□□□ -0.71
PDZRN3-212ENST00000498048 MSH6P52701 1360 aa10.63□□□□□ -0.71
PDZRN3-212ENST00000498048 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
PDZRN3-212ENST00000498048 IRX6P78412 446 aaPredicted RBP10.62□□□□□ -0.71
PDZRN3-212ENST00000498048 RRS1Q15050 365 aaKnown RBP10.62□□□□□ -0.71
PDZRN3-212ENST00000498048 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
PDZRN3-212ENST00000498048 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
PDZRN3-212ENST00000498048 ABCC6O95255 1503 aa10.61□□□□□ -0.71
PDZRN3-212ENST00000498048 COL18A1P39060 1754 aa10.61□□□□□ -0.71
PDZRN3-212ENST00000498048 ARHGEF10O15013 1369 aa10.61□□□□□ -0.71
PDZRN3-212ENST00000498048 PXDNQ92626 1479 aa10.61□□□□□ -0.71
PDZRN3-212ENST00000498048 SOX12O15370 315 aa10.6□□□□□ -0.71
PDZRN3-212ENST00000498048 FBLN1P23142 703 aa10.6□□□□□ -0.71
PDZRN3-212ENST00000498048 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
PDZRN3-212ENST00000498048 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
PDZRN3-212ENST00000498048 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-212ENST00000498048 KIF24Q5T7B8 1368 aa10.6□□□□□ -0.71
PDZRN3-212ENST00000498048 RNF123Q5XPI4 1314 aa10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 CACNA1FO60840 1977 aa10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 PARP4Q9UKK3 1724 aaKnown RBP10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 WNK3Q9BYP7 1800 aa10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 PAK3O75914 559 aaPredicted RBP10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 NEFMP07197 916 aa10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 RCAN3Q9UKA8 241 aa10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 ROBO1Q9Y6N7 1651 aa10.59□□□□□ -0.71
PDZRN3-212ENST00000498048 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.71
PDZRN3-212ENST00000498048 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
PDZRN3-212ENST00000498048 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-212ENST00000498048 E9PSI1 815 aa10.58□□□□□ -0.72
PDZRN3-212ENST00000498048 RRP1P56182 461 aaKnown RBP10.58□□□□□ -0.72
PDZRN3-212ENST00000498048 NEUROD2Q15784 382 aa10.58□□□□□ -0.72
PDZRN3-212ENST00000498048 DUSP27Q5VZP5 1158 aa10.58□□□□□ -0.72
PDZRN3-212ENST00000498048 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
PDZRN3-212ENST00000498048 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 KDM3BQ7LBC6 1761 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 ATF3P18847 181 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 PRKAR2BP31323 418 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 IL13P35225 146 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 NLRP6P59044 892 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 SLFN5Q08AF3 891 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 ABTB2Q8N961 1025 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 PKD1L3Q7Z443 1732 aa10.57□□□□□ -0.72
PDZRN3-212ENST00000498048 HMOX1P09601 288 aa10.56□□□□□ -0.72
PDZRN3-212ENST00000498048 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
PDZRN3-212ENST00000498048 NUTM2GQ5VZR2 741 aa10.56□□□□□ -0.72
PDZRN3-212ENST00000498048 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
PDZRN3-212ENST00000498048 SCN11AQ9UI33 1791 aa10.56□□□□□ -0.72
PDZRN3-212ENST00000498048 ZNF335Q9H4Z2 1342 aaPredicted RBP10.56□□□□□ -0.72
PDZRN3-212ENST00000498048 FCHSD2O94868 740 aa10.55□□□□□ -0.72
PDZRN3-212ENST00000498048 TMPOP42166 694 aaKnown RBP10.55□□□□□ -0.72
PDZRN3-212ENST00000498048 PSME1Q06323 249 aa10.55□□□□□ -0.72
PDZRN3-212ENST00000498048 CADPS2Q86UW7 1296 aa10.55□□□□□ -0.72
PDZRN3-212ENST00000498048 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
PDZRN3-212ENST00000498048 ORAI2Q96SN7 254 aa10.55□□□□□ -0.72
PDZRN3-212ENST00000498048 PHLPP1O60346 1717 aa10.55□□□□□ -0.72
PDZRN3-212ENST00000498048 AMPHP49418 695 aa10.54□□□□□ -0.72
PDZRN3-212ENST00000498048 USP19O94966 1318 aa10.54□□□□□ -0.72
PDZRN3-212ENST00000498048 KDRP35968 1356 aa10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 XPCQ01831 940 aaPredicted RBP10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 WDR63Q8IWG1 891 aa10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 TRMT2AQ8IZ69 625 aaKnown RBP10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 AHDC1Q5TGY3 1603 aaPredicted RBP10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 COL22A1Q8NFW1 1626 aaPredicted RBP10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 PLCH1Q4KWH8 1693 aa10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 NPHP3Q7Z494 1330 aa10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 SHANK3Q9BYB0 1731 aa10.53□□□□□ -0.72
PDZRN3-212ENST00000498048 LTBP4Q8N2S1 1624 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 FOXO3O43524 673 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 HOXC9P31274 260 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 NFE2L2Q16236 605 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 HSP90AB2PQ58FF8 381 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 IL16Q14005 1332 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 FANCIQ9NVI1 1328 aa10.52□□□□□ -0.73
PDZRN3-212ENST00000498048 RIPK4P57078 832 aa10.51□□□□□ -0.73
PDZRN3-212ENST00000498048 LMOD3Q0VAK6 560 aa10.51□□□□□ -0.73
PDZRN3-212ENST00000498048 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
PDZRN3-212ENST00000498048 KCNH5Q8NCM2 988 aa10.51□□□□□ -0.73
PDZRN3-212ENST00000498048 PPP4R2Q9NY27 417 aa10.51□□□□□ -0.73
PDZRN3-212ENST00000498048 NCAPD2Q15021 1401 aa10.5□□□□□ -0.73
PDZRN3-212ENST00000498048 SULT6B1Q6IMI4 303 aa10.5□□□□□ -0.73
PDZRN3-212ENST00000498048 LMOD2Q6P5Q4 547 aa10.5□□□□□ -0.73
PDZRN3-212ENST00000498048 KRT28Q7Z3Y7 464 aa10.5□□□□□ -0.73
PDZRN3-212ENST00000498048 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.5□□□□□ -0.73
PDZRN3-212ENST00000498048 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms