RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 GIGYF1O75420 1035 aaPredicted RBP8.47□□□□□ -1.05
A1CF-210ENST00000493415 DDB1Q16531 1140 aa8.47□□□□□ -1.05
A1CF-210ENST00000493415 PELP1Q8IZL8 1130 aaKnown RBP8.47□□□□□ -1.05
A1CF-210ENST00000493415 NUDT16Q96DE0 195 aaKnown RBP8.47□□□□□ -1.05
A1CF-210ENST00000493415 PDGFDQ9GZP0 370 aaPredicted RBP8.47□□□□□ -1.05
A1CF-210ENST00000493415 KDM2AQ9Y2K7 1162 aa8.47□□□□□ -1.05
A1CF-210ENST00000493415 CRB1P82279 1406 aa8.46□□□□□ -1.05
A1CF-210ENST00000493415 TOM1L2Q6ZVM7 507 aa8.46□□□□□ -1.06
A1CF-210ENST00000493415 ACEP12821 1306 aa8.46□□□□□ -1.06
A1CF-210ENST00000493415 CPDO75976 1380 aa8.46□□□□□ -1.06
A1CF-210ENST00000493415 RGPD5Q99666 1765 aa8.45□□□□□ -1.06
A1CF-210ENST00000493415 PLSCR1O15162 318 aa8.45□□□□□ -1.06
A1CF-210ENST00000493415 PTGER2P43116 358 aa8.45□□□□□ -1.06
A1CF-210ENST00000493415 GPR162Q16538 588 aa8.45□□□□□ -1.06
A1CF-210ENST00000493415 SYT17Q9BSW7 474 aa8.45□□□□□ -1.06
A1CF-210ENST00000493415 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
A1CF-210ENST00000493415 MTFR1LQ9H019 292 aa8.44□□□□□ -1.06
A1CF-210ENST00000493415 NHSQ6T4R5 1651 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 TXNRD1Q16881 649 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 POTEHQ6S545 545 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 USP19O94966 1318 aa8.43□□□□□ -1.06
A1CF-210ENST00000493415 POLR3AO14802 1390 aaPredicted RBP8.43□□□□□ -1.06
A1CF-210ENST00000493415 GCP02774 474 aa8.42□□□□□ -1.06
A1CF-210ENST00000493415 SLC15A2Q16348 729 aa8.42□□□□□ -1.06
A1CF-210ENST00000493415 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
A1CF-210ENST00000493415 ARXQ96QS3 562 aa8.42□□□□□ -1.06
A1CF-210ENST00000493415 PPIP5K1Q6PFW1 1433 aa8.42□□□□□ -1.06
A1CF-210ENST00000493415 BTAF1O14981 1849 aa8.41□□□□□ -1.06
A1CF-210ENST00000493415 SOX12O15370 315 aa8.41□□□□□ -1.06
A1CF-210ENST00000493415 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
A1CF-210ENST00000493415 CCDC61Q9Y6R9 512 aa8.41□□□□□ -1.06
A1CF-210ENST00000493415 SHANK3Q9BYB0 1731 aa8.4□□□□□ -1.06
A1CF-210ENST00000493415 PIK3C2AO00443 1686 aa8.4□□□□□ -1.06
A1CF-210ENST00000493415 MYCNP04198 464 aaPredicted RBP8.4□□□□□ -1.06
A1CF-210ENST00000493415 NLRP6P59044 892 aa8.4□□□□□ -1.06
A1CF-210ENST00000493415 MARCH10Q8NA82 808 aaPredicted RBP8.4□□□□□ -1.06
A1CF-210ENST00000493415 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
A1CF-210ENST00000493415 COL18A1P39060 1754 aa8.4□□□□□ -1.07
A1CF-210ENST00000493415 PAPPAQ13219 1627 aa8.4□□□□□ -1.07
A1CF-210ENST00000493415 SLIT3O75094 1523 aa8.39□□□□□ -1.07
A1CF-210ENST00000493415 TNS2Q63HR2 1409 aa8.39□□□□□ -1.07
A1CF-210ENST00000493415 AATKQ6ZMQ8 1374 aa8.39□□□□□ -1.07
A1CF-210ENST00000493415 WDR17Q8IZU2 1322 aa8.39□□□□□ -1.07
A1CF-210ENST00000493415 TUBGCP6Q96RT7 1819 aa8.39□□□□□ -1.07
A1CF-210ENST00000493415 POLD1P28340 1107 aa8.39□□□□□ -1.07
A1CF-210ENST00000493415 PROM2Q8N271 834 aa8.39□□□□□ -1.07
A1CF-210ENST00000493415 CDCA7Q9BWT1 371 aaPredicted RBP8.39□□□□□ -1.07
A1CF-210ENST00000493415 CPSF1Q10570 1443 aaKnown RBP8.38□□□□□ -1.07
A1CF-210ENST00000493415 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
A1CF-210ENST00000493415 QSER1Q2KHR3 1735 aa8.38□□□□□ -1.07
A1CF-210ENST00000493415 PLEKHG3A1L390 1219 aa8.38□□□□□ -1.07
A1CF-210ENST00000493415 EXOC5O00471 708 aa8.38□□□□□ -1.07
A1CF-210ENST00000493415 KIAA1210Q9ULL0 1709 aa8.37□□□□□ -1.07
A1CF-210ENST00000493415 MAP3K5Q99683 1374 aa8.37□□□□□ -1.07
A1CF-210ENST00000493415 SGIP1Q9BQI5 828 aa8.37□□□□□ -1.07
A1CF-210ENST00000493415 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
A1CF-210ENST00000493415 BCL9O00512 1426 aa8.37□□□□□ -1.07
A1CF-210ENST00000493415 USP6P35125 1406 aa8.37□□□□□ -1.07
A1CF-210ENST00000493415 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
A1CF-210ENST00000493415 LTN1O94822 1766 aa8.36□□□□□ -1.07
A1CF-210ENST00000493415 ABCC6O95255 1503 aa8.36□□□□□ -1.07
A1CF-210ENST00000493415 ZNF827Q17R98 1081 aa8.36□□□□□ -1.07
A1CF-210ENST00000493415 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
A1CF-210ENST00000493415 CARD10Q9BWT7 1032 aa8.35□□□□□ -1.07
A1CF-210ENST00000493415 AXIN2Q9Y2T1 843 aa8.35□□□□□ -1.07
A1CF-210ENST00000493415 ATP10DQ9P241 1426 aa8.35□□□□□ -1.07
A1CF-210ENST00000493415 CENPJQ9HC77 1338 aaPredicted RBP8.34□□□□□ -1.07
A1CF-210ENST00000493415 UTRNP46939 3433 aa8.34□□□□□ -1.07
A1CF-210ENST00000493415 NLGN2Q8NFZ4 835 aa8.34□□□□□ -1.07
A1CF-210ENST00000493415 ZNF526Q8TF50 670 aaPredicted RBP8.34□□□□□ -1.07
A1CF-210ENST00000493415 DOT1LQ8TEK3 1739 aa8.34□□□□□ -1.07
A1CF-210ENST00000493415 RAB3GAP2Q9H2M9 1393 aa8.34□□□□□ -1.07
A1CF-210ENST00000493415 COL24A1Q17RW2 1714 aa8.33□□□□□ -1.08
A1CF-210ENST00000493415 KCNH5Q8NCM2 988 aa8.33□□□□□ -1.08
A1CF-210ENST00000493415 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
A1CF-210ENST00000493415 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
A1CF-210ENST00000493415 NLRP2Q9NX02 1062 aa8.33□□□□□ -1.08
A1CF-210ENST00000493415 TFCP2L1Q9NZI6 479 aa8.33□□□□□ -1.08
A1CF-210ENST00000493415 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
A1CF-210ENST00000493415 U3KPZ7 1027 aaPredicted RBP8.33□□□□□ -1.08
A1CF-210ENST00000493415 GRIN3BO60391 1043 aa8.32□□□□□ -1.08
A1CF-210ENST00000493415 NFAT5O94916 1531 aa8.32□□□□□ -1.08
A1CF-210ENST00000493415 ARHGEF25Q86VW2 580 aa8.31□□□□□ -1.08
A1CF-210ENST00000493415 SLC16A10Q8TF71 515 aa8.31□□□□□ -1.08
A1CF-210ENST00000493415 SYTL4Q96C24 671 aaPredicted RBP8.31□□□□□ -1.08
A1CF-210ENST00000493415 LY75O60449 1722 aa8.31□□□□□ -1.08
A1CF-210ENST00000493415 PNPLA7Q6ZV29 1317 aa8.3□□□□□ -1.08
A1CF-210ENST00000493415 MON2Q7Z3U7 1717 aa8.3□□□□□ -1.08
A1CF-210ENST00000493415 IL2RBP14784 551 aa8.3□□□□□ -1.08
A1CF-210ENST00000493415 YBX3P16989 372 aaKnown RBP eCLIP8.3□□□□□ -1.08
A1CF-210ENST00000493415 HSPA6P17066 643 aa8.3□□□□□ -1.08
A1CF-210ENST00000493415 MSL1Q68DK7 614 aa8.3□□□□□ -1.08
A1CF-210ENST00000493415 LRRC4BQ9NT99 713 aa8.3□□□□□ -1.08
A1CF-210ENST00000493415 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
A1CF-210ENST00000493415 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
A1CF-210ENST00000493415 KCNQ4P56696 695 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms