RNA–Protein interactions for RNA: ENST00000492013.1

RTKN-210, Transcript of rhotekin, humanhuman

TSL 2

Gene RTKN, Length 853 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-210ENST00000492013 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
RTKN-210ENST00000492013 SOX12O15370 315 aa16.47■□□□□ 0.23
RTKN-210ENST00000492013 AMPHP49418 695 aa16.47■□□□□ 0.23
RTKN-210ENST00000492013 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
RTKN-210ENST00000492013 NUTM2GQ5VZR2 741 aa16.47■□□□□ 0.23
RTKN-210ENST00000492013 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
RTKN-210ENST00000492013 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
RTKN-210ENST00000492013 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
RTKN-210ENST00000492013 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
RTKN-210ENST00000492013 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
RTKN-210ENST00000492013 TRMT2AQ8IZ69 625 aaKnown RBP16.46■□□□□ 0.23
RTKN-210ENST00000492013 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
RTKN-210ENST00000492013 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
RTKN-210ENST00000492013 PXDNQ92626 1479 aa16.46■□□□□ 0.23
RTKN-210ENST00000492013 USP19O94966 1318 aa16.45■□□□□ 0.22
RTKN-210ENST00000492013 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
RTKN-210ENST00000492013 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
RTKN-210ENST00000492013 ERICH6BQ5W0A0 696 aa16.45■□□□□ 0.22
RTKN-210ENST00000492013 MED1Q15648 1581 aaPredicted RBP16.45■□□□□ 0.22
RTKN-210ENST00000492013 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
RTKN-210ENST00000492013 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
RTKN-210ENST00000492013 HMOX1P09601 288 aa16.43■□□□□ 0.22
RTKN-210ENST00000492013 HOXC9P31274 260 aa16.43■□□□□ 0.22
RTKN-210ENST00000492013 XPCQ01831 940 aaPredicted RBP16.43■□□□□ 0.22
RTKN-210ENST00000492013 RGPD5Q99666 1765 aa16.42■□□□□ 0.22
RTKN-210ENST00000492013 RGPD2P0DJD1 1756 aa16.41■□□□□ 0.22
RTKN-210ENST00000492013 ABCC6O95255 1503 aa16.41■□□□□ 0.22
RTKN-210ENST00000492013 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
RTKN-210ENST00000492013 IL16Q14005 1332 aa16.41■□□□□ 0.22
RTKN-210ENST00000492013 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
RTKN-210ENST00000492013 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
RTKN-210ENST00000492013 ABCA3Q99758 1704 aa16.4■□□□□ 0.22
RTKN-210ENST00000492013 RIPK4P57078 832 aa16.4■□□□□ 0.22
RTKN-210ENST00000492013 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
RTKN-210ENST00000492013 KDRP35968 1356 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 LTBP4Q8N2S1 1624 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
RTKN-210ENST00000492013 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 SULT6B1Q6IMI4 303 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 BRINP3Q76B58 766 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 IP6K1Q92551 441 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
RTKN-210ENST00000492013 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.21
RTKN-210ENST00000492013 GCP02774 474 aa16.38■□□□□ 0.21
RTKN-210ENST00000492013 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
RTKN-210ENST00000492013 COL18A1P39060 1754 aa16.37■□□□□ 0.21
RTKN-210ENST00000492013 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
RTKN-210ENST00000492013 PHACTR3Q96KR7 559 aa16.37■□□□□ 0.21
RTKN-210ENST00000492013 SPATA31A3Q5VYP0 1347 aa16.37■□□□□ 0.21
RTKN-210ENST00000492013 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
RTKN-210ENST00000492013 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
RTKN-210ENST00000492013 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
RTKN-210ENST00000492013 EYA1Q99502 592 aa16.35■□□□□ 0.21
RTKN-210ENST00000492013 ROBO1Q9Y6N7 1651 aa16.34■□□□□ 0.21
RTKN-210ENST00000492013 DDX17Q92841 729 aaKnown RBP16.34■□□□□ 0.21
RTKN-210ENST00000492013 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.2
RTKN-210ENST00000492013 SOS2Q07890 1332 aaPredicted RBP16.33■□□□□ 0.2
RTKN-210ENST00000492013 LRRC37A3O60309 1634 aa16.33■□□□□ 0.2
RTKN-210ENST00000492013 LMO7Q8WWI1 1683 aa16.33■□□□□ 0.2
RTKN-210ENST00000492013 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.2
RTKN-210ENST00000492013 CT47B1P0C2W7 299 aaPredicted RBP16.32■□□□□ 0.2
RTKN-210ENST00000492013 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
RTKN-210ENST00000492013 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
RTKN-210ENST00000492013 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
RTKN-210ENST00000492013 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
RTKN-210ENST00000492013 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
RTKN-210ENST00000492013 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
RTKN-210ENST00000492013 CPDO75976 1380 aa16.29■□□□□ 0.2
RTKN-210ENST00000492013 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
RTKN-210ENST00000492013 IFT57Q9NWB7 429 aa16.29■□□□□ 0.2
RTKN-210ENST00000492013 GNAI1P63096 354 aa16.28■□□□□ 0.2
RTKN-210ENST00000492013 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
RTKN-210ENST00000492013 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.19
RTKN-210ENST00000492013 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
RTKN-210ENST00000492013 ANKRD24Q8TF21 1146 aa16.26■□□□□ 0.19
RTKN-210ENST00000492013 TSR2Q969E8 191 aaKnown RBP16.26■□□□□ 0.19
RTKN-210ENST00000492013 HTATSF1O43719 755 aaKnown RBP16.25■□□□□ 0.19
RTKN-210ENST00000492013 ZC3H6P61129 1189 aaKnown RBP16.25■□□□□ 0.19
RTKN-210ENST00000492013 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
RTKN-210ENST00000492013 PHLPP1O60346 1717 aa16.25■□□□□ 0.19
RTKN-210ENST00000492013 ERBB3P21860 1342 aa16.24■□□□□ 0.19
RTKN-210ENST00000492013 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
RTKN-210ENST00000492013 RARSP54136 660 aaKnown RBP16.24■□□□□ 0.19
RTKN-210ENST00000492013 EXOSC9Q06265 439 aaKnown RBP16.24■□□□□ 0.19
RTKN-210ENST00000492013 NBPF6Q5VWK0 638 aa16.24■□□□□ 0.19
RTKN-210ENST00000492013 NBPF4Q96M43 638 aa16.24■□□□□ 0.19
RTKN-210ENST00000492013 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
RTKN-210ENST00000492013 MAP3K5Q99683 1374 aa16.24■□□□□ 0.19
RTKN-210ENST00000492013 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
RTKN-210ENST00000492013 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
RTKN-210ENST00000492013 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
RTKN-210ENST00000492013 KIAA0232Q92628 1395 aa16.23■□□□□ 0.19
RTKN-210ENST00000492013 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
RTKN-210ENST00000492013 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
RTKN-210ENST00000492013 FAM83GA6ND36 823 aa16.22■□□□□ 0.19
RTKN-210ENST00000492013 PLIN1O60240 522 aa16.22■□□□□ 0.19
RTKN-210ENST00000492013 CABLES1Q8TDN4 633 aa16.22■□□□□ 0.19
RTKN-210ENST00000492013 ZNF428Q96B54 188 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms