RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 WASLO00401 505 aaPredicted RBP17.76■□□□□ 0.43
RER1-207ENST00000488353 TMPOP42166 694 aaKnown RBP17.75■□□□□ 0.43
RER1-207ENST00000488353 HDGFP51858 240 aaKnown RBP17.75■□□□□ 0.43
RER1-207ENST00000488353 CIZ1Q9ULV3 898 aaPredicted RBP17.75■□□□□ 0.43
RER1-207ENST00000488353 LTKP29376 864 aa17.75■□□□□ 0.43
RER1-207ENST00000488353 CCDC173Q0VFZ6 552 aa17.75■□□□□ 0.43
RER1-207ENST00000488353 UBR1Q8IWV7 1749 aa17.74■□□□□ 0.43
RER1-207ENST00000488353 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
RER1-207ENST00000488353 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
RER1-207ENST00000488353 TNPO1Q92973 898 aaKnown RBP17.74■□□□□ 0.43
RER1-207ENST00000488353 SSH1Q8WYL5 1049 aa17.73■□□□□ 0.43
RER1-207ENST00000488353 SNX21Q969T3 373 aa17.73■□□□□ 0.43
RER1-207ENST00000488353 TERF1P54274 439 aa17.73■□□□□ 0.43
RER1-207ENST00000488353 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
RER1-207ENST00000488353 ITPRIPQ8IWB1 547 aa17.73■□□□□ 0.43
RER1-207ENST00000488353 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
RER1-207ENST00000488353 TRIM27P14373 513 aa17.72■□□□□ 0.43
RER1-207ENST00000488353 ZSCAN30Q86W11 494 aa17.72■□□□□ 0.43
RER1-207ENST00000488353 SMC5Q8IY18 1101 aa17.72■□□□□ 0.43
RER1-207ENST00000488353 PPP1R9BQ96SB3 815 aa17.72■□□□□ 0.43
RER1-207ENST00000488353 ANKRD26Q9UPS8 1709 aa17.71■□□□□ 0.43
RER1-207ENST00000488353 ADGRB2O60241 1585 aa17.71■□□□□ 0.43
RER1-207ENST00000488353 OFD1O75665 1012 aa17.71■□□□□ 0.43
RER1-207ENST00000488353 RIPK4P57078 832 aa17.71■□□□□ 0.43
RER1-207ENST00000488353 ANP32BQ92688 251 aaKnown RBP17.71■□□□□ 0.43
RER1-207ENST00000488353 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
RER1-207ENST00000488353 MED14O60244 1454 aa17.71■□□□□ 0.43
RER1-207ENST00000488353 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
RER1-207ENST00000488353 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.42
RER1-207ENST00000488353 NOB1Q9ULX3 412 aaKnown RBP17.71■□□□□ 0.42
RER1-207ENST00000488353 ROBO2Q9HCK4 1378 aa17.7■□□□□ 0.42
RER1-207ENST00000488353 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
RER1-207ENST00000488353 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
RER1-207ENST00000488353 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
RER1-207ENST00000488353 ATP7BP35670 1465 aa17.7■□□□□ 0.42
RER1-207ENST00000488353 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
RER1-207ENST00000488353 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
RER1-207ENST00000488353 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
RER1-207ENST00000488353 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
RER1-207ENST00000488353 NME9Q86XW9 330 aa17.69■□□□□ 0.42
RER1-207ENST00000488353 MAP7D2Q96T17 732 aa17.69■□□□□ 0.42
RER1-207ENST00000488353 DIAPH1O60610 1272 aaKnown RBP17.68■□□□□ 0.42
RER1-207ENST00000488353 MSNP26038 577 aaKnown RBP17.68■□□□□ 0.42
RER1-207ENST00000488353 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
RER1-207ENST00000488353 TECPR2O15040 1411 aa17.68■□□□□ 0.42
RER1-207ENST00000488353 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
RER1-207ENST00000488353 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
RER1-207ENST00000488353 FAM135BQ49AJ0 1406 aa17.67■□□□□ 0.42
RER1-207ENST00000488353 HSP90AB1P08238 724 aaKnown RBP17.67■□□□□ 0.42
RER1-207ENST00000488353 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
RER1-207ENST00000488353 CPSF1Q10570 1443 aaKnown RBP17.67■□□□□ 0.42
RER1-207ENST00000488353 CT47B1P0C2W7 299 aaPredicted RBP17.66■□□□□ 0.42
RER1-207ENST00000488353 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
RER1-207ENST00000488353 TMEM57Q8N5G2 664 aa17.66■□□□□ 0.42
RER1-207ENST00000488353 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
RER1-207ENST00000488353 PRR36Q9H6K5 1346 aa17.66■□□□□ 0.42
RER1-207ENST00000488353 DDX19BQ9UMR2 479 aa17.66■□□□□ 0.42
RER1-207ENST00000488353 CPS1P31327 1500 aa17.65■□□□□ 0.42
RER1-207ENST00000488353 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
RER1-207ENST00000488353 KNDC1Q76NI1 1749 aa17.65■□□□□ 0.42
RER1-207ENST00000488353 IBTKQ9P2D0 1353 aaPredicted RBP17.65■□□□□ 0.42
RER1-207ENST00000488353 PNPLA6Q8IY17 1366 aa17.64■□□□□ 0.41
RER1-207ENST00000488353 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
RER1-207ENST00000488353 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
RER1-207ENST00000488353 GOLGA6L22H0YM25 854 aa17.64■□□□□ 0.41
RER1-207ENST00000488353 SIRT1Q96EB6 747 aa17.64■□□□□ 0.41
RER1-207ENST00000488353 C3P01024 1663 aa17.64■□□□□ 0.41
RER1-207ENST00000488353 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
RER1-207ENST00000488353 HS1BP3Q53T59 392 aa17.62■□□□□ 0.41
RER1-207ENST00000488353 PRDM4Q9UKN5 801 aa17.62■□□□□ 0.41
RER1-207ENST00000488353 PTPRUQ92729 1446 aa17.62■□□□□ 0.41
RER1-207ENST00000488353 HMOX1P09601 288 aa17.61■□□□□ 0.41
RER1-207ENST00000488353 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
RER1-207ENST00000488353 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
RER1-207ENST00000488353 CDC42BPGQ6DT37 1551 aa17.61■□□□□ 0.41
RER1-207ENST00000488353 MAP2P11137 1827 aaKnown RBP17.61■□□□□ 0.41
RER1-207ENST00000488353 FER1L4A9Z1Z3 1794 aa17.6■□□□□ 0.41
RER1-207ENST00000488353 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
RER1-207ENST00000488353 IL16Q14005 1332 aa17.6■□□□□ 0.41
RER1-207ENST00000488353 CLEC17AQ6ZS10 378 aa17.6■□□□□ 0.41
RER1-207ENST00000488353 ZBTB40Q9NUA8 1239 aa17.6■□□□□ 0.41
RER1-207ENST00000488353 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.6■□□□□ 0.41
RER1-207ENST00000488353 RBM10P98175 930 aaKnown RBP17.6■□□□□ 0.41
RER1-207ENST00000488353 THUMPD2Q9BTF0 503 aaKnown RBP17.6■□□□□ 0.41
RER1-207ENST00000488353 COG3Q96JB2 828 aa17.59■□□□□ 0.41
RER1-207ENST00000488353 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
RER1-207ENST00000488353 AMOTL2Q9Y2J4 779 aa17.59■□□□□ 0.41
RER1-207ENST00000488353 LNPKQ9C0E8 428 aa17.58■□□□□ 0.41
RER1-207ENST00000488353 PODXL2Q9NZ53 605 aa17.58■□□□□ 0.41
RER1-207ENST00000488353 DDX49Q9Y6V7 483 aaKnown RBP17.58■□□□□ 0.41
RER1-207ENST00000488353 MTERF4Q7Z6M4 381 aaKnown RBP17.58■□□□□ 0.4
RER1-207ENST00000488353 FAM13BQ9NYF5 915 aa17.58■□□□□ 0.4
RER1-207ENST00000488353 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
RER1-207ENST00000488353 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
RER1-207ENST00000488353 ELL2O00472 640 aaPredicted RBP17.57■□□□□ 0.4
RER1-207ENST00000488353 FCHSD2O94868 740 aa17.57■□□□□ 0.4
RER1-207ENST00000488353 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
RER1-207ENST00000488353 R3HCC1Q9Y3T6 440 aaKnown RBP17.57■□□□□ 0.4
RER1-207ENST00000488353 K7ELQ4 463 aaPredicted RBP17.57■□□□□ 0.4
RER1-207ENST00000488353 ZNF500O60304 480 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms