RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PPP1R37O75864 691 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 VPS72Q15906 364 aa4.17□□□□□ -1.74
DEPDC1-203ENST00000488146 AFF2P51816 1311 aa4.16□□□□□ -1.74
DEPDC1-203ENST00000488146 DHX57Q6P158 1386 aaKnown RBP4.16□□□□□ -1.74
DEPDC1-203ENST00000488146 LMOD2Q6P5Q4 547 aa4.16□□□□□ -1.74
DEPDC1-203ENST00000488146 AMOTL2Q9Y2J4 779 aa4.16□□□□□ -1.74
DEPDC1-203ENST00000488146 SLIT3O75094 1523 aa4.16□□□□□ -1.74
DEPDC1-203ENST00000488146 CPDO75976 1380 aa4.16□□□□□ -1.74
DEPDC1-203ENST00000488146 BRWD3Q6RI45 1802 aa4.16□□□□□ -1.74
DEPDC1-203ENST00000488146 POTEJP0CG39 1038 aa4.15□□□□□ -1.74
DEPDC1-203ENST00000488146 PSME1Q06323 249 aa4.15□□□□□ -1.74
DEPDC1-203ENST00000488146 MEX3CQ5U5Q3 659 aaKnown RBP4.15□□□□□ -1.74
DEPDC1-203ENST00000488146 METP08581 1390 aa4.15□□□□□ -1.75
DEPDC1-203ENST00000488146 ARHGEF28Q8N1W1 1705 aaKnown RBP4.15□□□□□ -1.75
DEPDC1-203ENST00000488146 TTLL13PA6NNM8 815 aa4.15□□□□□ -1.75
DEPDC1-203ENST00000488146 SGIP1Q9BQI5 828 aa4.15□□□□□ -1.75
DEPDC1-203ENST00000488146 SPATA31A3Q5VYP0 1347 aa4.15□□□□□ -1.75
DEPDC1-203ENST00000488146 NRKQ7Z2Y5 1582 aa4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 SEMA3EO15041 775 aa4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 SCUBE2Q9NQ36 999 aa4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 YTHDC2Q9H6S0 1430 aaKnown RBP4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 CFAP65Q6ZU64 1925 aaKnown RBP4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 KANK4Q5T7N3 995 aaPredicted RBP4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 MFRPQ9BY79 579 aa4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 RRP7BPQ9NSQ0 103 aa4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 THRAP3Q9Y2W1 955 aaKnown RBP4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 ROBO2Q9HCK4 1378 aa4.14□□□□□ -1.75
DEPDC1-203ENST00000488146 POTEMA6NI47 508 aa4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 POLR3AO14802 1390 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 UNC5CLQ8IV45 518 aa4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 WDR70Q9NW82 654 aa4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 PAPPAQ13219 1627 aa4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 POTEFA5A3E0 1075 aa4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 SEC24BO95487 1268 aa4.13□□□□□ -1.75
DEPDC1-203ENST00000488146 TMEM132AQ24JP5 1023 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 POTEGQ6S5H5 508 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 BARGINQ6ZT62 677 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 TRIM35Q9UPQ4 493 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 ZNF831Q5JPB2 1677 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 NHSQ6T4R5 1651 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 BRPF1P55201 1214 aaPredicted RBP4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 IFNL1Q8IU54 200 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 GJD4Q96KN9 370 aaPredicted RBP4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 PUS7Q96PZ0 661 aaKnown RBP4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 CDCA7Q9BWT1 371 aaPredicted RBP4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 SLC24A3Q9HC58 644 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 CICQ96RK0 1608 aaPredicted RBP4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 AKAP12Q02952 1782 aa4.12□□□□□ -1.75
DEPDC1-203ENST00000488146 IER5LQ5T953 404 aa4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 C14orf37Q86TY3 774 aa4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 QTRT2Q9H974 415 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 USP19O94966 1318 aa4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 CHRM1P11229 460 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 C14orf93Q9H972 538 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 COLQQ9Y215 455 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 SBNO2Q9Y2G9 1366 aa4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 COL18A1P39060 1754 aa4.11□□□□□ -1.75
DEPDC1-203ENST00000488146 EFCAB3Q8N7B9 438 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 SLC26A8Q96RN1 970 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 TMEM106CQ9BVX2 250 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 CABP2Q9NPB3 220 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 USP21Q9UK80 565 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 PHF8Q9UPP1 1060 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 LRRC37A3O60309 1634 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 NEUROD2Q15784 382 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 SBF2Q86WG5 1849 aa4.1□□□□□ -1.75
DEPDC1-203ENST00000488146 BAG6P46379 1132 aa4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 PSEN1P49768 467 aa4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 MON2Q7Z3U7 1717 aa4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 SPATA31A5Q5VU36 1347 aa4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 SPATA31A7Q8IWB4 1347 aa4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 RANGAP1P46060 587 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 ZC3H15Q8WU90 426 aaKnown RBP4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 FAM163AQ96GL9 167 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-203ENST00000488146 GPRASP1Q5JY77 1395 aa4.08□□□□□ -1.76
DEPDC1-203ENST00000488146 PDAP1Q13442 181 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-203ENST00000488146 C10orf71Q711Q0 1435 aa4.08□□□□□ -1.76
DEPDC1-203ENST00000488146 SSH2Q76I76 1423 aa4.08□□□□□ -1.76
DEPDC1-203ENST00000488146 PLEKHG3A1L390 1219 aa4.08□□□□□ -1.76
DEPDC1-203ENST00000488146 PLCG2P16885 1265 aa4.08□□□□□ -1.76
DEPDC1-203ENST00000488146 SF3B2Q13435 895 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-203ENST00000488146 PIK3C2AO00443 1686 aa4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 USP31Q70CQ4 1352 aa4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 LCE2DQ5TA82 110 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 FAM196AQ6ZSG2 479 aa4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 GPBP1L1Q9HC44 474 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 OVOS2A0A0J9YW53 1432 aa4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 OVOS2Q6IE36 1432 aa4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 CCDC7Q96M83 1385 aa4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 ZNF467Q7Z7K2 595 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-203ENST00000488146 OVOS2A0A0G2JMS6 1433 aa4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 KIF24Q5T7B8 1368 aa4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 PLSCR1O15162 318 aa4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 KRT27Q7Z3Y8 459 aa4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 LARP6Q9BRS8 491 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 NSD2O96028 1365 aa4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 RGPD8O14715 1765 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 E2F4Q16254 413 aa4.06□□□□□ -1.76
DEPDC1-203ENST00000488146 RYDENQ9NUL5 291 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms