RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 USP19O94966 1318 aa17.94■□□□□ 0.46
SSR4-210ENST00000485612 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
SSR4-210ENST00000485612 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
SSR4-210ENST00000485612 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
SSR4-210ENST00000485612 TOM1L2Q6ZVM7 507 aa17.93■□□□□ 0.46
SSR4-210ENST00000485612 CDK19Q9BWU1 502 aa17.92■□□□□ 0.46
SSR4-210ENST00000485612 BCL9O00512 1426 aa17.91■□□□□ 0.46
SSR4-210ENST00000485612 ITSN1Q15811 1721 aa17.91■□□□□ 0.46
SSR4-210ENST00000485612 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
SSR4-210ENST00000485612 PLEKHG3A1L390 1219 aa17.9■□□□□ 0.46
SSR4-210ENST00000485612 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
SSR4-210ENST00000485612 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
SSR4-210ENST00000485612 CCDC61Q9Y6R9 512 aa17.9■□□□□ 0.46
SSR4-210ENST00000485612 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
SSR4-210ENST00000485612 KDM2AQ9Y2K7 1162 aa17.87■□□□□ 0.45
SSR4-210ENST00000485612 AATKQ6ZMQ8 1374 aa17.87■□□□□ 0.45
SSR4-210ENST00000485612 EXOC5O00471 708 aa17.85■□□□□ 0.45
SSR4-210ENST00000485612 SHANK3Q9BYB0 1731 aa17.84■□□□□ 0.45
SSR4-210ENST00000485612 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.44
SSR4-210ENST00000485612 POLD1P28340 1107 aa17.82■□□□□ 0.44
SSR4-210ENST00000485612 DCAF11Q8TEB1 546 aa17.82■□□□□ 0.44
SSR4-210ENST00000485612 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
SSR4-210ENST00000485612 TOPAZ1Q8N9V7 1692 aa17.82■□□□□ 0.44
SSR4-210ENST00000485612 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
SSR4-210ENST00000485612 NLRP6P59044 892 aa17.81■□□□□ 0.44
SSR4-210ENST00000485612 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
SSR4-210ENST00000485612 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
SSR4-210ENST00000485612 GRIN3BO60391 1043 aa17.8■□□□□ 0.44
SSR4-210ENST00000485612 HSPA6P17066 643 aa17.8■□□□□ 0.44
SSR4-210ENST00000485612 NLGN2Q8NFZ4 835 aa17.8■□□□□ 0.44
SSR4-210ENST00000485612 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
SSR4-210ENST00000485612 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
SSR4-210ENST00000485612 CSB-PGBD3P0DP91 1061 aa17.79■□□□□ 0.44
SSR4-210ENST00000485612 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
SSR4-210ENST00000485612 CARD10Q9BWT7 1032 aa17.79■□□□□ 0.44
SSR4-210ENST00000485612 YBX3P16989 372 aaKnown RBP eCLIP17.77■□□□□ 0.444e-12■■■□□ 16.3
SSR4-210ENST00000485612 GPBP1L1Q9HC44 474 aaPredicted RBP17.77■□□□□ 0.44
SSR4-210ENST00000485612 BRD4O60885 1362 aaPredicted RBP17.77■□□□□ 0.43
SSR4-210ENST00000485612 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
SSR4-210ENST00000485612 STAC3Q96MF2 364 aa17.76■□□□□ 0.43
SSR4-210ENST00000485612 LRRC4BQ9NT99 713 aa17.76■□□□□ 0.43
SSR4-210ENST00000485612 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
SSR4-210ENST00000485612 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
SSR4-210ENST00000485612 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
SSR4-210ENST00000485612 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
SSR4-210ENST00000485612 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
SSR4-210ENST00000485612 SLIT3O75094 1523 aa17.74■□□□□ 0.43
SSR4-210ENST00000485612 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
SSR4-210ENST00000485612 COL18A1P39060 1754 aa17.74■□□□□ 0.43
SSR4-210ENST00000485612 USP6P35125 1406 aa17.72■□□□□ 0.43
SSR4-210ENST00000485612 CABP2Q9NPB3 220 aa17.72■□□□□ 0.43
SSR4-210ENST00000485612 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
SSR4-210ENST00000485612 NHSQ6T4R5 1651 aa17.71■□□□□ 0.43
SSR4-210ENST00000485612 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
SSR4-210ENST00000485612 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
SSR4-210ENST00000485612 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
SSR4-210ENST00000485612 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
SSR4-210ENST00000485612 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
SSR4-210ENST00000485612 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
SSR4-210ENST00000485612 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
SSR4-210ENST00000485612 SOX12O15370 315 aa17.69■□□□□ 0.42
SSR4-210ENST00000485612 SLC27A3Q5K4L6 730 aa17.69■□□□□ 0.42
SSR4-210ENST00000485612 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
SSR4-210ENST00000485612 COL24A1Q17RW2 1714 aa17.66■□□□□ 0.42
SSR4-210ENST00000485612 BTAF1O14981 1849 aa17.64■□□□□ 0.41
SSR4-210ENST00000485612 IL2RBP14784 551 aa17.64■□□□□ 0.41
SSR4-210ENST00000485612 TRPM1Q7Z4N2 1603 aa17.64■□□□□ 0.41
SSR4-210ENST00000485612 RGPD5Q99666 1765 aa17.63■□□□□ 0.41
SSR4-210ENST00000485612 ABCC6O95255 1503 aa17.63■□□□□ 0.41
SSR4-210ENST00000485612 KCNQ4P56696 695 aa17.63■□□□□ 0.41
SSR4-210ENST00000485612 NBPF1Q3BBV0 1214 aa17.63■□□□□ 0.41
SSR4-210ENST00000485612 NLRP2Q9NX02 1062 aa17.63■□□□□ 0.41
SSR4-210ENST00000485612 PIK3C2AO00443 1686 aa17.62■□□□□ 0.41
SSR4-210ENST00000485612 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
SSR4-210ENST00000485612 MSH5O43196 834 aa17.62■□□□□ 0.41
SSR4-210ENST00000485612 ADCY9O60503 1353 aa17.62■□□□□ 0.41
SSR4-210ENST00000485612 APLP1P51693 650 aa17.61■□□□□ 0.41
SSR4-210ENST00000485612 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
SSR4-210ENST00000485612 CENPJQ9HC77 1338 aaPredicted RBP17.6■□□□□ 0.41
SSR4-210ENST00000485612 KIF3CO14782 793 aa17.59■□□□□ 0.41
SSR4-210ENST00000485612 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
SSR4-210ENST00000485612 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
SSR4-210ENST00000485612 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
SSR4-210ENST00000485612 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
SSR4-210ENST00000485612 ERBB3P21860 1342 aa17.57■□□□□ 0.4
SSR4-210ENST00000485612 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
SSR4-210ENST00000485612 DDX54Q8TDD1 881 aaKnown RBP17.57■□□□□ 0.4
SSR4-210ENST00000485612 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
SSR4-210ENST00000485612 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
SSR4-210ENST00000485612 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
SSR4-210ENST00000485612 CAPN15O75808 1086 aa17.56■□□□□ 0.4
SSR4-210ENST00000485612 NFAT5O94916 1531 aa17.55■□□□□ 0.4
SSR4-210ENST00000485612 TUBGCP6Q96RT7 1819 aa17.54■□□□□ 0.4
SSR4-210ENST00000485612 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
SSR4-210ENST00000485612 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
SSR4-210ENST00000485612 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SSR4-210ENST00000485612 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
SSR4-210ENST00000485612 EVC2Q86UK5 1308 aa17.51■□□□□ 0.39
SSR4-210ENST00000485612 TOMM70O94826 608 aa17.51■□□□□ 0.39
SSR4-210ENST00000485612 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms