RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-203ENST00000480484 FSD2A1L4K1 749 aa12.77□□□□□ -0.37
COMMD4-203ENST00000480484 SLC12A5Q9H2X9 1139 aa12.76□□□□□ -0.37
COMMD4-203ENST00000480484 CCDC125Q86Z20 511 aa12.76□□□□□ -0.37
COMMD4-203ENST00000480484 INSRP06213 1382 aa12.76□□□□□ -0.37
COMMD4-203ENST00000480484 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-203ENST00000480484 PIK3C2GO75747 1445 aa12.75□□□□□ -0.37
COMMD4-203ENST00000480484 TBC1D32Q96NH3 1257 aa12.75□□□□□ -0.37
COMMD4-203ENST00000480484 CGNL1Q0VF96 1302 aa12.75□□□□□ -0.37
COMMD4-203ENST00000480484 MED14O60244 1454 aa12.75□□□□□ -0.37
COMMD4-203ENST00000480484 MRE11P49959 708 aa12.75□□□□□ -0.37
COMMD4-203ENST00000480484 PTPRMP28827 1452 aa12.74□□□□□ -0.37
COMMD4-203ENST00000480484 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
COMMD4-203ENST00000480484 ESPNB1AK53 854 aa12.74□□□□□ -0.37
COMMD4-203ENST00000480484 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
COMMD4-203ENST00000480484 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
COMMD4-203ENST00000480484 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
COMMD4-203ENST00000480484 TRMT2AQ8IZ69 625 aaKnown RBP12.74□□□□□ -0.37
COMMD4-203ENST00000480484 NLRP1Q9C000 1473 aa12.74□□□□□ -0.37
COMMD4-203ENST00000480484 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-203ENST00000480484 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
COMMD4-203ENST00000480484 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-203ENST00000480484 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
COMMD4-203ENST00000480484 ZMYND10O75800 440 aa12.73□□□□□ -0.37
COMMD4-203ENST00000480484 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
COMMD4-203ENST00000480484 GRPEL1Q9HAV7 217 aa12.73□□□□□ -0.37
COMMD4-203ENST00000480484 SEMA3EO15041 775 aa12.73□□□□□ -0.37
COMMD4-203ENST00000480484 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
COMMD4-203ENST00000480484 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
COMMD4-203ENST00000480484 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
COMMD4-203ENST00000480484 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
COMMD4-203ENST00000480484 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
COMMD4-203ENST00000480484 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
COMMD4-203ENST00000480484 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
COMMD4-203ENST00000480484 FAM117AQ9C073 453 aa12.71□□□□□ -0.37
COMMD4-203ENST00000480484 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-203ENST00000480484 CHMP5Q9NZZ3 219 aa12.71□□□□□ -0.37
COMMD4-203ENST00000480484 MYO5BQ9ULV0 1848 aa12.71□□□□□ -0.38
COMMD4-203ENST00000480484 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.38
COMMD4-203ENST00000480484 IDI1Q13907 227 aa12.7□□□□□ -0.38
COMMD4-203ENST00000480484 PDE3AQ14432 1141 aa12.7□□□□□ -0.38
COMMD4-203ENST00000480484 SETBP1Q9Y6X0 1596 aa12.7□□□□□ -0.38
COMMD4-203ENST00000480484 STK26Q9P289 416 aa12.7□□□□□ -0.38
COMMD4-203ENST00000480484 FBLN1P23142 703 aa12.69□□□□□ -0.38
COMMD4-203ENST00000480484 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
COMMD4-203ENST00000480484 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
COMMD4-203ENST00000480484 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-203ENST00000480484 MORC1Q86VD1 984 aa12.68□□□□□ -0.38
COMMD4-203ENST00000480484 C22orf23Q9BZE7 217 aa12.68□□□□□ -0.38
COMMD4-203ENST00000480484 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
COMMD4-203ENST00000480484 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
COMMD4-203ENST00000480484 NEXMIFQ5QGS0 1516 aa12.68□□□□□ -0.38
COMMD4-203ENST00000480484 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
COMMD4-203ENST00000480484 TCP11L2Q8N4U5 519 aa12.67□□□□□ -0.38
COMMD4-203ENST00000480484 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-203ENST00000480484 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
COMMD4-203ENST00000480484 A2ML1A8K2U0 1454 aa12.66□□□□□ -0.38
COMMD4-203ENST00000480484 TULP4Q9NRJ4 1543 aa12.66□□□□□ -0.38
COMMD4-203ENST00000480484 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
COMMD4-203ENST00000480484 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
COMMD4-203ENST00000480484 XIRP1Q702N8 1843 aaKnown RBP12.66□□□□□ -0.38
COMMD4-203ENST00000480484 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
COMMD4-203ENST00000480484 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.38
COMMD4-203ENST00000480484 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-203ENST00000480484 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-203ENST00000480484 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
COMMD4-203ENST00000480484 XRN1Q8IZH2 1706 aaKnown RBP12.64□□□□□ -0.39
COMMD4-203ENST00000480484 ARHGEF28Q8N1W1 1705 aaKnown RBP12.64□□□□□ -0.39
COMMD4-203ENST00000480484 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
COMMD4-203ENST00000480484 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
COMMD4-203ENST00000480484 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
COMMD4-203ENST00000480484 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-203ENST00000480484 MTHFSP49914 203 aa12.64□□□□□ -0.39
COMMD4-203ENST00000480484 RBM10P98175 930 aaKnown RBP12.64□□□□□ -0.39
COMMD4-203ENST00000480484 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
COMMD4-203ENST00000480484 TPM2P07951 284 aa12.63□□□□□ -0.39
COMMD4-203ENST00000480484 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-203ENST00000480484 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
COMMD4-203ENST00000480484 CHAMP1Q96JM3 812 aa12.62□□□□□ -0.39
COMMD4-203ENST00000480484 PDCL3Q9H2J4 239 aa12.62□□□□□ -0.39
COMMD4-203ENST00000480484 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-203ENST00000480484 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
COMMD4-203ENST00000480484 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
COMMD4-203ENST00000480484 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
COMMD4-203ENST00000480484 BRD1O95696 1058 aa12.6□□□□□ -0.39
COMMD4-203ENST00000480484 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
COMMD4-203ENST00000480484 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
COMMD4-203ENST00000480484 ZFYVE9O95405 1425 aa12.6□□□□□ -0.39
COMMD4-203ENST00000480484 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
COMMD4-203ENST00000480484 POLA2Q14181 598 aa12.6□□□□□ -0.39
COMMD4-203ENST00000480484 NINLQ9Y2I6 1382 aa12.59□□□□□ -0.39
COMMD4-203ENST00000480484 FTSJ3Q8IY81 847 aaKnown RBP12.59□□□□□ -0.39
COMMD4-203ENST00000480484 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
COMMD4-203ENST00000480484 ANP32BQ92688 251 aaKnown RBP12.59□□□□□ -0.39
COMMD4-203ENST00000480484 GBP4Q96PP9 640 aa12.59□□□□□ -0.39
COMMD4-203ENST00000480484 GGNBP2Q9H3C7 697 aa12.59□□□□□ -0.39
COMMD4-203ENST00000480484 MLECQ14165 292 aa12.58□□□□□ -0.39
COMMD4-203ENST00000480484 FAM13BQ9NYF5 915 aa12.58□□□□□ -0.39
COMMD4-203ENST00000480484 A0A1W2PP64 1363 aa12.58□□□□□ -0.4
COMMD4-203ENST00000480484 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms