RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 TEX14Q8IWB6 1497 aa8.58□□□□□ -1.04
CMSS1-203ENST00000478909 TSPY4P0CV99 314 aa8.58□□□□□ -1.04
CMSS1-203ENST00000478909 TSPY10P0CW01 314 aa8.58□□□□□ -1.04
CMSS1-203ENST00000478909 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
CMSS1-203ENST00000478909 Q6ZNB5 142 aa8.58□□□□□ -1.04
CMSS1-203ENST00000478909 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
CMSS1-203ENST00000478909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.58□□□□□ -1.04
CMSS1-203ENST00000478909 ZCCHC11Q5TAX3 1644 aaKnown RBP8.58□□□□□ -1.04
CMSS1-203ENST00000478909 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
CMSS1-203ENST00000478909 UNC13BO14795 1591 aa8.57□□□□□ -1.04
CMSS1-203ENST00000478909 HLA-CQ95604 372 aa8.57□□□□□ -1.04
CMSS1-203ENST00000478909 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
CMSS1-203ENST00000478909 CHIC2Q9UKJ5 165 aa8.57□□□□□ -1.04
CMSS1-203ENST00000478909 WDR7Q9Y4E6 1490 aa8.57□□□□□ -1.04
CMSS1-203ENST00000478909 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
CMSS1-203ENST00000478909 ARHGAP5Q13017 1502 aa8.56□□□□□ -1.04
CMSS1-203ENST00000478909 USP46P62068 366 aa8.56□□□□□ -1.04
CMSS1-203ENST00000478909 AMHR2Q16671 573 aa8.56□□□□□ -1.04
CMSS1-203ENST00000478909 SPRYD7Q5W111 196 aa8.56□□□□□ -1.04
CMSS1-203ENST00000478909 PRDM9Q9NQV7 894 aa8.56□□□□□ -1.04
CMSS1-203ENST00000478909 KIF15Q9NS87 1388 aa8.56□□□□□ -1.04
CMSS1-203ENST00000478909 ZNF644Q9H582 1327 aaPredicted RBP8.55□□□□□ -1.04
CMSS1-203ENST00000478909 PLCH2O75038 1416 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 ERBINQ96RT1 1412 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 DUOX2Q9NRD8 1548 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 NRG2O14511 850 aaPredicted RBP8.55□□□□□ -1.04
CMSS1-203ENST00000478909 HOXA2O43364 376 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 Q3C1V9 767 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 PDZRN3Q9UPQ7 1066 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
CMSS1-203ENST00000478909 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
CMSS1-203ENST00000478909 TTLL12Q14166 644 aaPredicted RBP8.54□□□□□ -1.04
CMSS1-203ENST00000478909 MSS51Q4VC12 460 aa8.54□□□□□ -1.04
CMSS1-203ENST00000478909 TRIM67Q6ZTA4 783 aa8.54□□□□□ -1.04
CMSS1-203ENST00000478909 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
CMSS1-203ENST00000478909 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
CMSS1-203ENST00000478909 IQGAP3Q86VI3 1631 aa8.54□□□□□ -1.04
CMSS1-203ENST00000478909 ABCC1P33527 1531 aa8.54□□□□□ -1.04
CMSS1-203ENST00000478909 RTEL1-TNFRSF6BF6WH68 1400 aa8.54□□□□□ -1.04
CMSS1-203ENST00000478909 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
CMSS1-203ENST00000478909 ARID4BQ4LE39 1312 aaPredicted RBP8.54□□□□□ -1.04
CMSS1-203ENST00000478909 ATP10AO60312 1499 aa8.53□□□□□ -1.04
CMSS1-203ENST00000478909 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
CMSS1-203ENST00000478909 GUCA2AQ02747 115 aa8.53□□□□□ -1.04
CMSS1-203ENST00000478909 SYCP2Q9BX26 1530 aa8.53□□□□□ -1.04
CMSS1-203ENST00000478909 LCE2BO14633 110 aa8.52□□□□□ -1.05
CMSS1-203ENST00000478909 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
CMSS1-203ENST00000478909 ZNF697Q5TEC3 545 aa8.52□□□□□ -1.05
CMSS1-203ENST00000478909 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
CMSS1-203ENST00000478909 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
CMSS1-203ENST00000478909 ABCA9Q8IUA7 1624 aa8.51□□□□□ -1.05
CMSS1-203ENST00000478909 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
CMSS1-203ENST00000478909 TRIM66O15016 1216 aa8.51□□□□□ -1.05
CMSS1-203ENST00000478909 EFCAB2Q5VUJ9 269 aa8.51□□□□□ -1.05
CMSS1-203ENST00000478909 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
CMSS1-203ENST00000478909 ZNF777Q9ULD5 760 aaPredicted RBP8.51□□□□□ -1.05
CMSS1-203ENST00000478909 ERCC6L2Q5T890 1561 aa8.51□□□□□ -1.05
CMSS1-203ENST00000478909 CFAP74Q9C0B2 1584 aa8.51□□□□□ -1.05
CMSS1-203ENST00000478909 NUP155O75694 1391 aa8.5□□□□□ -1.05
CMSS1-203ENST00000478909 ANP32CO43423 234 aa8.5□□□□□ -1.05
CMSS1-203ENST00000478909 AK7Q96M32 723 aa8.5□□□□□ -1.05
CMSS1-203ENST00000478909 EIF2AK4Q9P2K8 1649 aaKnown RBP8.5□□□□□ -1.05
CMSS1-203ENST00000478909 RALGAPBQ86X10 1494 aa8.5□□□□□ -1.05
CMSS1-203ENST00000478909 NEURL4Q96JN8 1562 aa8.49□□□□□ -1.05
CMSS1-203ENST00000478909 SPATA31E1Q6ZUB1 1445 aa8.49□□□□□ -1.05
CMSS1-203ENST00000478909 MMP16P51512 607 aa8.49□□□□□ -1.05
CMSS1-203ENST00000478909 PARP9Q8IXQ6 854 aa8.49□□□□□ -1.05
CMSS1-203ENST00000478909 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
CMSS1-203ENST00000478909 LAMC1P11047 1609 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 RPIAP49247 311 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 PRR20EP86478 221 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 PRR20CP86479 221 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 PRR20DP86480 221 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 PRR20BP86481 221 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 PRR20AP86496 221 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 TRAF7Q6Q0C0 670 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 SPIRE2Q8WWL2 714 aa8.48□□□□□ -1.05
CMSS1-203ENST00000478909 SYMPKQ92797 1274 aaKnown RBP8.48□□□□□ -1.05
CMSS1-203ENST00000478909 ROCK2O75116 1388 aaKnown RBP8.48□□□□□ -1.05
CMSS1-203ENST00000478909 DEPDC5O75140 1603 aa8.47□□□□□ -1.05
CMSS1-203ENST00000478909 GDF9O60383 454 aa8.47□□□□□ -1.05
CMSS1-203ENST00000478909 DXOO77932 396 aaKnown RBP8.47□□□□□ -1.05
CMSS1-203ENST00000478909 PCDHGC3Q9UN70 934 aa8.47□□□□□ -1.05
CMSS1-203ENST00000478909 ZFYVE16Q7Z3T8 1539 aa8.47□□□□□ -1.05
CMSS1-203ENST00000478909 INO80Q9ULG1 1556 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-203ENST00000478909 CNTLNQ9NXG0 1405 aa8.46□□□□□ -1.05
CMSS1-203ENST00000478909 TNFRSF10AO00220 468 aa8.46□□□□□ -1.06
CMSS1-203ENST00000478909 FDX1P10109 184 aa8.46□□□□□ -1.06
CMSS1-203ENST00000478909 BEGAINQ9BUH8 593 aa8.46□□□□□ -1.06
CMSS1-203ENST00000478909 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.06
CMSS1-203ENST00000478909 MOXD2PA6NHM9 499 aa8.45□□□□□ -1.06
CMSS1-203ENST00000478909 CD2BP2O95400 341 aaKnown RBP8.45□□□□□ -1.06
CMSS1-203ENST00000478909 MS4A1P11836 297 aa8.45□□□□□ -1.06
CMSS1-203ENST00000478909 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
CMSS1-203ENST00000478909 PKD2L1Q9P0L9 805 aa8.45□□□□□ -1.06
CMSS1-203ENST00000478909 KDM5CP41229 1560 aa8.44□□□□□ -1.06
CMSS1-203ENST00000478909 NDUFV2P19404 249 aa8.44□□□□□ -1.06
CMSS1-203ENST00000478909 HNRNPMP52272 730 aaKnown RBP eCLIP8.44□□□□□ -1.06
CMSS1-203ENST00000478909 DDX10Q13206 875 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms