RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 RECKO95980 971 aa9.89□□□□□ -0.83
LRCH3-215ENST00000476664 SKIP12755 728 aa9.89□□□□□ -0.83
LRCH3-215ENST00000476664 PREX1Q8TCU6 1659 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 GCGRP47871 477 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 NR6A1Q15406 480 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 SWI5Q1ZZU3 235 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 FBXO33Q7Z6M2 555 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 C1orf216Q8TAB5 229 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 EGFL7Q9UHF1 273 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 PTPRTO14522 1441 aa9.88□□□□□ -0.83
LRCH3-215ENST00000476664 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 ARAP3Q8WWN8 1544 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 UHRF1BP1LA0JNW5 1464 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 NBPF26B4DH59 902 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 ATP5J2-PTCD1G3V325 749 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 ATN1P54259 1190 aaPredicted RBP9.87□□□□□ -0.83
LRCH3-215ENST00000476664 CRTC2Q53ET0 693 aaPredicted RBP9.87□□□□□ -0.83
LRCH3-215ENST00000476664 ZNF454Q8N9F8 522 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 SLAIN2Q9P270 581 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
LRCH3-215ENST00000476664 CD109Q6YHK3 1445 aa9.87□□□□□ -0.83
LRCH3-215ENST00000476664 PIK3CDO00329 1044 aa9.86□□□□□ -0.83
LRCH3-215ENST00000476664 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
LRCH3-215ENST00000476664 RASA1P20936 1047 aa9.86□□□□□ -0.83
LRCH3-215ENST00000476664 ERCC5P28715 1186 aaPredicted RBP9.86□□□□□ -0.83
LRCH3-215ENST00000476664 PTK7Q13308 1070 aa9.86□□□□□ -0.83
LRCH3-215ENST00000476664 COL19A1Q14993 1142 aa9.86□□□□□ -0.83
LRCH3-215ENST00000476664 TSNAXIP1Q2TAA8 658 aa9.86□□□□□ -0.83
LRCH3-215ENST00000476664 NUDT18Q6ZVK8 323 aa9.86□□□□□ -0.83
LRCH3-215ENST00000476664 ZCCHC11Q5TAX3 1644 aaKnown RBP9.85□□□□□ -0.83
LRCH3-215ENST00000476664 CWC22Q9HCG8 908 aaKnown RBP9.85□□□□□ -0.83
LRCH3-215ENST00000476664 KDM5BQ9UGL1 1544 aa9.85□□□□□ -0.83
LRCH3-215ENST00000476664 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
LRCH3-215ENST00000476664 ANKMY2Q8IV38 441 aa9.84□□□□□ -0.83
LRCH3-215ENST00000476664 ZSCAN29Q8IWY8 852 aaPredicted RBP9.84□□□□□ -0.83
LRCH3-215ENST00000476664 HIRIP3Q9BW71 556 aaPredicted RBP9.84□□□□□ -0.83
LRCH3-215ENST00000476664 FAM198AQ9UFP1 575 aa9.84□□□□□ -0.83
LRCH3-215ENST00000476664 C7P10643 843 aa9.83□□□□□ -0.84
LRCH3-215ENST00000476664 MAPK1P28482 360 aa9.83□□□□□ -0.84
LRCH3-215ENST00000476664 GUCA2AQ02747 115 aa9.83□□□□□ -0.84
LRCH3-215ENST00000476664 RNF135Q8IUD6 432 aa9.83□□□□□ -0.84
LRCH3-215ENST00000476664 ASB16Q96NS5 453 aa9.83□□□□□ -0.84
LRCH3-215ENST00000476664 ADAM33Q9BZ11 813 aa9.83□□□□□ -0.84
LRCH3-215ENST00000476664 ZBBXA8MT70 800 aa9.82□□□□□ -0.84
LRCH3-215ENST00000476664 GRIPAP1Q4V328 841 aa9.82□□□□□ -0.84
LRCH3-215ENST00000476664 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
LRCH3-215ENST00000476664 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
LRCH3-215ENST00000476664 TNIKQ9UKE5 1360 aa9.82□□□□□ -0.84
LRCH3-215ENST00000476664 WDR7Q9Y4E6 1490 aa9.82□□□□□ -0.84
LRCH3-215ENST00000476664 UACAQ9BZF9 1416 aa9.82□□□□□ -0.84
LRCH3-215ENST00000476664 H3BRB1 525 aa9.81□□□□□ -0.84
LRCH3-215ENST00000476664 GALR2O43603 387 aaPredicted RBP9.81□□□□□ -0.84
LRCH3-215ENST00000476664 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
LRCH3-215ENST00000476664 GLYCTKQ8IVS8 523 aa9.81□□□□□ -0.84
LRCH3-215ENST00000476664 DEPDC4Q8N2C3 294 aa9.81□□□□□ -0.84
LRCH3-215ENST00000476664 TUT1Q9H6E5 874 aaKnown RBP9.81□□□□□ -0.84
LRCH3-215ENST00000476664 RGS17Q9UGC6 210 aaPredicted RBP9.81□□□□□ -0.84
LRCH3-215ENST00000476664 DCTN4Q9UJW0 460 aa9.81□□□□□ -0.84
LRCH3-215ENST00000476664 PNMA3Q9UL41 463 aa9.81□□□□□ -0.84
LRCH3-215ENST00000476664 SCAMP3O14828 347 aaKnown RBP9.8□□□□□ -0.84
LRCH3-215ENST00000476664 ABL1P00519 1130 aa9.8□□□□□ -0.84
LRCH3-215ENST00000476664 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
LRCH3-215ENST00000476664 NOP9Q86U38 636 aaKnown RBP9.8□□□□□ -0.84
LRCH3-215ENST00000476664 TATDN2Q93075 761 aa9.8□□□□□ -0.84
LRCH3-215ENST00000476664 TTC37Q6PGP7 1564 aa9.8□□□□□ -0.84
LRCH3-215ENST00000476664 FER1L4A9Z1Z3 1794 aa9.79□□□□□ -0.84
LRCH3-215ENST00000476664 C19orf67A6NJJ6 358 aa9.79□□□□□ -0.84
LRCH3-215ENST00000476664 RAPGEF3O95398 923 aa9.79□□□□□ -0.84
LRCH3-215ENST00000476664 FBXO45P0C2W1 286 aa9.79□□□□□ -0.84
LRCH3-215ENST00000476664 CLCN6P51797 869 aa9.79□□□□□ -0.84
LRCH3-215ENST00000476664 EAPPQ56P03 285 aaPredicted RBP9.79□□□□□ -0.84
LRCH3-215ENST00000476664 DPH6Q7L8W6 267 aa9.79□□□□□ -0.84
LRCH3-215ENST00000476664 TSKSQ9UJT2 592 aa9.79□□□□□ -0.84
LRCH3-215ENST00000476664 ZC3H4Q9UPT8 1303 aaKnown RBP9.79□□□□□ -0.84
LRCH3-215ENST00000476664 ATMINO43313 823 aaPredicted RBP9.78□□□□□ -0.84
LRCH3-215ENST00000476664 ICMTO60725 284 aa9.78□□□□□ -0.84
LRCH3-215ENST00000476664 TAGLNQ01995 201 aaKnown RBP9.78□□□□□ -0.84
LRCH3-215ENST00000476664 NCOA4Q13772 614 aa9.78□□□□□ -0.84
LRCH3-215ENST00000476664 GIMAP6Q6P9H5 292 aa9.78□□□□□ -0.84
LRCH3-215ENST00000476664 PACS2Q86VP3 889 aa9.78□□□□□ -0.84
LRCH3-215ENST00000476664 HLA-CQ95604 372 aa9.78□□□□□ -0.84
LRCH3-215ENST00000476664 SETD1AO15047 1707 aaKnown RBP9.77□□□□□ -0.85
LRCH3-215ENST00000476664 WRNQ14191 1432 aaPredicted RBP eCLIP9.77□□□□□ -0.85
LRCH3-215ENST00000476664 ITGAEP38570 1179 aa9.77□□□□□ -0.85
LRCH3-215ENST00000476664 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
LRCH3-215ENST00000476664 DPYDQ12882 1025 aa9.77□□□□□ -0.85
LRCH3-215ENST00000476664 SLFNL1Q499Z3 407 aa9.77□□□□□ -0.85
LRCH3-215ENST00000476664 ASTLQ6HA08 431 aaPredicted RBP9.77□□□□□ -0.85
LRCH3-215ENST00000476664 TRIM50Q86XT4 487 aa9.76□□□□□ -0.85
LRCH3-215ENST00000476664 FAM174AQ8TBP5 190 aa9.76□□□□□ -0.85
LRCH3-215ENST00000476664 KCNH8Q96L42 1107 aa9.76□□□□□ -0.85
LRCH3-215ENST00000476664 BACH2Q9BYV9 841 aa9.76□□□□□ -0.85
LRCH3-215ENST00000476664 C21orf2O43822 256 aa9.75□□□□□ -0.85
LRCH3-215ENST00000476664 SEC24BO95487 1268 aa9.75□□□□□ -0.85
LRCH3-215ENST00000476664 ATP1A2P50993 1020 aa9.75□□□□□ -0.85
LRCH3-215ENST00000476664 PIK3R5Q8WYR1 880 aa9.75□□□□□ -0.85
LRCH3-215ENST00000476664 TANGO6Q9C0B7 1094 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms