RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 USB1Q9BQ65 265 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 PPP1R12CQ9BZL4 782 aa6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 EEA1Q15075 1411 aa6.81□□□□□ -1.32
TMEM39A-206ENST00000473684 UHRF1BP1LA0JNW5 1464 aa6.81□□□□□ -1.32
TMEM39A-206ENST00000473684 SOX11P35716 441 aa6.81□□□□□ -1.32
TMEM39A-206ENST00000473684 PPP4CP60510 307 aa6.81□□□□□ -1.32
TMEM39A-206ENST00000473684 PBXIP1Q96AQ6 731 aa6.81□□□□□ -1.32
TMEM39A-206ENST00000473684 CEP170Q5SW79 1584 aa6.81□□□□□ -1.32
TMEM39A-206ENST00000473684 SRPK2P78362 688 aaKnown RBP6.81□□□□□ -1.32
TMEM39A-206ENST00000473684 ZNF608Q9ULD9 1512 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 THAP11Q96EK4 314 aa6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 HPS5Q9UPZ3 1129 aa6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 CUX1P39880 1505 aa6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 BCAMP50895 628 aa6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 SCUBE3Q8IX30 993 aa6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 KCTD17Q8N5Z5 321 aa6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 TSR3Q9UJK0 312 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-206ENST00000473684 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-206ENST00000473684 UCN2Q96RP3 112 aa6.79□□□□□ -1.32
TMEM39A-206ENST00000473684 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-206ENST00000473684 GOLGA8CPA6NN73 597 aa6.79□□□□□ -1.32
TMEM39A-206ENST00000473684 PALM3A6NDB9 673 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-206ENST00000473684 F12P00748 615 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-206ENST00000473684 PNMA1Q8ND90 353 aa6.79□□□□□ -1.32
TMEM39A-206ENST00000473684 CFAP43Q8NDM7 1665 aa6.78□□□□□ -1.32
TMEM39A-206ENST00000473684 FMNL1O95466 1100 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-206ENST00000473684 RFX1P22670 979 aa6.78□□□□□ -1.32
TMEM39A-206ENST00000473684 STAC3Q96MF2 364 aa6.78□□□□□ -1.32
TMEM39A-206ENST00000473684 PRDM4Q9UKN5 801 aa6.78□□□□□ -1.32
TMEM39A-206ENST00000473684 PCDHB3Q9Y5E6 796 aa6.78□□□□□ -1.32
TMEM39A-206ENST00000473684 NR1I2O75469 434 aa6.78□□□□□ -1.32
TMEM39A-206ENST00000473684 SEMA3FQ13275 785 aa6.77□□□□□ -1.33
TMEM39A-206ENST00000473684 JUNDP17535 347 aa6.77□□□□□ -1.33
TMEM39A-206ENST00000473684 ANKRD13DQ6ZTN6 518 aa6.77□□□□□ -1.33
TMEM39A-206ENST00000473684 WNT2BQ93097 391 aa6.77□□□□□ -1.33
TMEM39A-206ENST00000473684 TFIP11Q9UBB9 837 aaKnown RBP6.77□□□□□ -1.33
TMEM39A-206ENST00000473684 NR1H3Q13133 447 aa6.76□□□□□ -1.33
TMEM39A-206ENST00000473684 PTPRNQ16849 979 aa6.76□□□□□ -1.33
TMEM39A-206ENST00000473684 FKBPLQ9UIM3 349 aa6.76□□□□□ -1.33
TMEM39A-206ENST00000473684 NAP1L2Q9ULW6 460 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-206ENST00000473684 EIF4G2P78344 907 aaKnown RBP eCLIP6.76□□□□□ -1.33
TMEM39A-206ENST00000473684 FBXO45P0C2W1 286 aa6.76□□□□□ -1.33
TMEM39A-206ENST00000473684 MAP10Q9P2G4 905 aa6.76□□□□□ -1.33
TMEM39A-206ENST00000473684 GRIN2AQ12879 1464 aa6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 LMOD1P29536 600 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 IPO4Q8TEX9 1081 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 SNAPC4Q5SXM2 1469 aa6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 ZBBXA8MT70 800 aa6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 NCLP19338 710 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 BRD2P25440 801 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 AEBP1Q8IUX7 1158 aa6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 NAP1L5Q96NT1 182 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 PDCL3Q9H2J4 239 aa6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 MAFBQ9Y5Q3 323 aaPredicted RBP6.75□□□□□ -1.33
TMEM39A-206ENST00000473684 ZC3H4Q9UPT8 1303 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 MSS51Q4VC12 460 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 TBC1D9Q6ZT07 1266 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 WBP1LQ9NX94 342 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 ABCC10Q5T3U5 1492 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 FGD5Q6ZNL6 1462 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 ADCY10Q96PN6 1610 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 TRIM52Q96A61 297 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 USTQ9Y2C2 406 aa6.74□□□□□ -1.33
TMEM39A-206ENST00000473684 FAM160A2Q8N612 972 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-206ENST00000473684 FRAT1Q92837 279 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-206ENST00000473684 PNNQ9H307 717 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-206ENST00000473684 DXOO77932 396 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-206ENST00000473684 ATP9BO43861 1147 aa6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 CANXP27824 592 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 CSB-PGBD3P0DP91 1061 aa6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 MMP16P51512 607 aa6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 SPSB2Q99619 263 aa6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 EVA1BQ9NVM1 165 aa6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 CCDC9Q9Y3X0 531 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 FHAD1B1AJZ9 1412 aa6.72□□□□□ -1.33
TMEM39A-206ENST00000473684 ATG7O95352 703 aa6.71□□□□□ -1.33
TMEM39A-206ENST00000473684 CCNYL3P0C7X3 344 aa6.71□□□□□ -1.33
TMEM39A-206ENST00000473684 LAS1LQ9Y4W2 734 aaKnown RBP6.71□□□□□ -1.33
TMEM39A-206ENST00000473684 GAPVD1Q14C86 1478 aa6.71□□□□□ -1.34
TMEM39A-206ENST00000473684 CNGB1Q14028 1251 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-206ENST00000473684 KDM5BQ9UGL1 1544 aa6.71□□□□□ -1.34
TMEM39A-206ENST00000473684 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-206ENST00000473684 CTHP32929 405 aa6.71□□□□□ -1.34
TMEM39A-206ENST00000473684 CTTNBP2Q8WZ74 1663 aa6.71□□□□□ -1.34
TMEM39A-206ENST00000473684 KCNH2Q12809 1159 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 THSD4Q6ZMP0 1018 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 NFATC2IPQ8NCF5 419 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 NUDT12Q9BQG2 462 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 RRAGDQ9NQL2 400 aaPredicted RBP6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 PRDM9Q9NQV7 894 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 GPSM3Q9Y4H4 160 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 DHX57Q6P158 1386 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 PIK3CDO00329 1044 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 TPM2P07951 284 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 COPS2P61201 443 aa6.7□□□□□ -1.34
TMEM39A-206ENST00000473684 ANP32CO43423 234 aa6.69□□□□□ -1.34
TMEM39A-206ENST00000473684 RGS3P49796 1198 aa6.69□□□□□ -1.34
TMEM39A-206ENST00000473684 CDCA8Q53HL2 280 aa6.69□□□□□ -1.34
TMEM39A-206ENST00000473684 OCSTAMPQ9BR26 566 aa6.69□□□□□ -1.34
TMEM39A-206ENST00000473684 IRX6P78412 446 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms