RNA–Protein interactions for RNA: ENST00000473039.5

DENND1A-206, Transcript of DENN domain containing 1A, human

TSL 1 (best)

Gene DENND1A, Length 4,800 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND1A-206	ENST00000473039	CEBPA	P49715	358 aa	Predicted RBP	13.75	□□□□□ -0.21
DENND1A-206	ENST00000473039	PDCL2	Q8N4E4	241 aa		13.75	□□□□□ -0.21
DENND1A-206	ENST00000473039	FBXW7	Q969H0	707 aa		13.75	□□□□□ -0.21
DENND1A-206	ENST00000473039	SNX21	Q969T3	373 aa		13.75	□□□□□ -0.21
DENND1A-206	ENST00000473039	SDF4	Q9BRK5	362 aa		13.75	□□□□□ -0.21
DENND1A-206	ENST00000473039	NFE2L2	Q16236	605 aa		13.74	□□□□□ -0.21
DENND1A-206	ENST00000473039	NAT10	Q9H0A0	1025 aa	Known RBP	13.74	□□□□□ -0.21
DENND1A-206	ENST00000473039	NEXN	Q0ZGT2	675 aa		13.74	□□□□□ -0.21
DENND1A-206	ENST00000473039	CCDC30	Q5VVM6	783 aa		13.74	□□□□□ -0.21
DENND1A-206	ENST00000473039	AEBP1	Q8IUX7	1158 aa		13.74	□□□□□ -0.21
DENND1A-206	ENST00000473039	KRT85	P78386	507 aa		13.74	□□□□□ -0.21
DENND1A-206	ENST00000473039	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.74	□□□□□ -0.21
DENND1A-206	ENST00000473039	CPLX2	Q6PUV4	134 aa	Known RBP	13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	CREBRF	Q8IUR6	639 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	SRCIN1	Q9C0H9	1055 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	CABP1	Q9NZU7	370 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	TEX14	Q8IWB6	1497 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	CPLX1	O14810	134 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	PSME1	Q06323	249 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	TAF7L	Q5H9L4	462 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	PRAG1	Q86YV5	1406 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	DYNC1I1	O14576	645 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	SLC26A8	Q96RN1	970 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	THUMPD2	Q9BTF0	503 aa	Known RBP	13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	TNMD	Q9H2S6	317 aa		13.73	□□□□□ -0.21
DENND1A-206	ENST00000473039	KIN	O60870	393 aa	Known RBP	13.72	□□□□□ -0.21
DENND1A-206	ENST00000473039	NUCB1	Q02818	461 aa		13.72	□□□□□ -0.21
DENND1A-206	ENST00000473039	UPF3B	Q9BZI7	483 aa	Known RBP	13.72	□□□□□ -0.21
DENND1A-206	ENST00000473039	CYP46A1	Q9Y6A2	500 aa		13.72	□□□□□ -0.21
DENND1A-206	ENST00000473039	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.72	□□□□□ -0.21
DENND1A-206	ENST00000473039	RLBP1	P12271	317 aa		13.71	□□□□□ -0.21
DENND1A-206	ENST00000473039	ZSCAN23	Q3MJ62	389 aa		13.71	□□□□□ -0.21
DENND1A-206	ENST00000473039	PRDM10	Q9NQV6	1147 aa		13.71	□□□□□ -0.21
DENND1A-206	ENST00000473039	WDR7	Q9Y4E6	1490 aa		13.71	□□□□□ -0.21
DENND1A-206	ENST00000473039	TPM1	P09493	284 aa		13.71	□□□□□ -0.21
DENND1A-206	ENST00000473039	SULT6B1	Q6IMI4	303 aa		13.71	□□□□□ -0.21
DENND1A-206	ENST00000473039	SMC5	Q8IY18	1101 aa		13.71	□□□□□ -0.21
DENND1A-206	ENST00000473039	ATAD2	Q6PL18	1390 aa		13.71	□□□□□ -0.22
DENND1A-206	ENST00000473039	FOSB	P53539	338 aa		13.71	□□□□□ -0.22
DENND1A-206	ENST00000473039	ASXL1	Q8IXJ9	1541 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	LARP1B	Q659C4	914 aa	Known RBP	13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	DDX58	O95786	925 aa	Known RBP	13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	C1orf141	Q5JVX7	400 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	USP25	Q9UHP3	1055 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	RAB3GAP1	Q15042	981 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	RAPGEF6	Q8TEU7	1601 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	CBX1	P83916	185 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	CCDC183	Q5T5S1	534 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	CDK19	Q9BWU1	502 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	TNN	Q9UQP3	1299 aa		13.7	□□□□□ -0.22
DENND1A-206	ENST00000473039	SPATA31E1	Q6ZUB1	1445 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	SYNE3	Q6ZMZ3	975 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	FSD1	Q9BTV5	496 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	NUP62CL	Q9H1M0	184 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	PODXL2	Q9NZ53	605 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	RPGRIP1L	Q68CZ1	1315 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	TOMM22	Q9NS69	142 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	RBM27	Q9P2N5	1060 aa	Known RBP	13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	EXOC6B	Q9Y2D4	811 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	SMARCA5	O60264	1052 aa	Predicted RBP	13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	GAS2L2	Q8NHY3	880 aa		13.69	□□□□□ -0.22
DENND1A-206	ENST00000473039	NUP153	P49790	1475 aa	Known RBP	13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	MEX3C	Q5U5Q3	659 aa	Known RBP	13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	ADGRF5	Q8IZF2	1346 aa		13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	OFD1	O75665	1012 aa		13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	KIAA0556	O60303	1618 aa		13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	HIP1	O00291	1037 aa		13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	EVA1C	P58658	441 aa		13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	TSR1	Q2NL82	804 aa	Known RBP	13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	ARHGEF12	Q9NZN5	1544 aa		13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	PIK3C2G	O75747	1445 aa		13.68	□□□□□ -0.22
DENND1A-206	ENST00000473039	LRSAM1	Q6UWE0	723 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	RASSF8	Q8NHQ8	419 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	IL16	Q14005	1332 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	ZKSCAN5	Q9Y2L8	839 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	INSR	P06213	1382 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	TRIM29	Q14134	588 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	HS1BP3	Q53T59	392 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	HOOK1	Q9UJC3	728 aa	Known RBP	13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	MAP3K11	Q16584	847 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	FMNL2	Q96PY5	1086 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	IL1RAPL2	Q9NP60	686 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	PLCH2	O75038	1416 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	PBRM1	Q86U86	1689 aa		13.67	□□□□□ -0.22
DENND1A-206	ENST00000473039	ABCC2	Q92887	1545 aa		13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	PES1	O00541	588 aa	Known RBP	13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	RBM42	Q9BTD8	480 aa	Known RBP	13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	UHRF1BP1	Q6BDS2	1440 aa		13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	SMC2	O95347	1197 aa		13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	PDIA4	P13667	645 aa	Known RBP	13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	ANKRD1	Q15327	319 aa		13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	PRIMPOL	Q96LW4	560 aa		13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	MX1	P20591	662 aa		13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	TULP1	O00294	542 aa	Predicted RBP	13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	GDPD2	Q9HCC8	539 aa		13.66	□□□□□ -0.22
DENND1A-206	ENST00000473039	POLR3A	O14802	1390 aa	Predicted RBP	13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms