RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 PSME1Q06323 249 aa20.55■□□□□ 0.88
HOXB3-205ENST00000470495 ZFP91Q96JP5 570 aaPredicted RBP20.55■□□□□ 0.88
HOXB3-205ENST00000470495 FAM83GA6ND36 823 aa20.54■□□□□ 0.88
HOXB3-205ENST00000470495 STK31Q9BXU1 1019 aa20.54■□□□□ 0.88
HOXB3-205ENST00000470495 TMEM57Q8N5G2 664 aa20.54■□□□□ 0.88
HOXB3-205ENST00000470495 PHACTR3Q96KR7 559 aa20.53■□□□□ 0.88
HOXB3-205ENST00000470495 ABCC11Q96J66 1382 aa20.53■□□□□ 0.88
HOXB3-205ENST00000470495 TRIM27P14373 513 aa20.52■□□□□ 0.88
HOXB3-205ENST00000470495 ARHGAP31Q2M1Z3 1444 aa20.52■□□□□ 0.88
HOXB3-205ENST00000470495 CT47B1P0C2W7 299 aaPredicted RBP20.52■□□□□ 0.88
HOXB3-205ENST00000470495 CCDC27Q2M243 656 aa20.52■□□□□ 0.88
HOXB3-205ENST00000470495 MCM10Q7L590 875 aa20.51■□□□□ 0.87
HOXB3-205ENST00000470495 TSPYL4Q9UJ04 414 aa20.51■□□□□ 0.87
HOXB3-205ENST00000470495 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
HOXB3-205ENST00000470495 VWDEQ8N2E2 1590 aa20.51■□□□□ 0.87
HOXB3-205ENST00000470495 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
HOXB3-205ENST00000470495 METP08581 1390 aa20.5■□□□□ 0.87
HOXB3-205ENST00000470495 DEPDC5O75140 1603 aa20.5■□□□□ 0.87
HOXB3-205ENST00000470495 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
HOXB3-205ENST00000470495 PCDHB15Q9Y5E8 787 aa20.5■□□□□ 0.87
HOXB3-205ENST00000470495 GZF1Q9H116 711 aaPredicted RBP20.5■□□□□ 0.87
HOXB3-205ENST00000470495 LTKP29376 864 aa20.49■□□□□ 0.87
HOXB3-205ENST00000470495 IRX3P78415 501 aaPredicted RBP20.49■□□□□ 0.87
HOXB3-205ENST00000470495 API5Q9BZZ5 524 aaKnown RBP20.49■□□□□ 0.87
HOXB3-205ENST00000470495 HSP90AB2PQ58FF8 381 aa20.48■□□□□ 0.87
HOXB3-205ENST00000470495 FRMPD1Q5SYB0 1578 aa20.48■□□□□ 0.87
HOXB3-205ENST00000470495 MROH1Q8NDA8 1641 aa20.48■□□□□ 0.87
HOXB3-205ENST00000470495 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
HOXB3-205ENST00000470495 CNPY4Q8N129 248 aa20.47■□□□□ 0.87
HOXB3-205ENST00000470495 XPCQ01831 940 aaPredicted RBP20.47■□□□□ 0.87
HOXB3-205ENST00000470495 TTC21BQ7Z4L5 1316 aa20.47■□□□□ 0.87
HOXB3-205ENST00000470495 TRMT2AQ8IZ69 625 aaKnown RBP20.47■□□□□ 0.87
HOXB3-205ENST00000470495 IPO4Q8TEX9 1081 aaKnown RBP20.47■□□□□ 0.87
HOXB3-205ENST00000470495 TRIM35Q9UPQ4 493 aa20.47■□□□□ 0.87
HOXB3-205ENST00000470495 ANKLE2Q86XL3 938 aa20.46■□□□□ 0.87
HOXB3-205ENST00000470495 CCDC9Q9Y3X0 531 aaKnown RBP20.46■□□□□ 0.87
HOXB3-205ENST00000470495 GLI2P10070 1586 aa20.46■□□□□ 0.87
HOXB3-205ENST00000470495 CAMSAP1Q5T5Y3 1602 aa20.45■□□□□ 0.86
HOXB3-205ENST00000470495 MSNP26038 577 aaKnown RBP20.45■□□□□ 0.86
HOXB3-205ENST00000470495 ZNF771Q7L3S4 317 aaPredicted RBP20.44■□□□□ 0.86
HOXB3-205ENST00000470495 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
HOXB3-205ENST00000470495 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
HOXB3-205ENST00000470495 TPRNQ4KMQ1 711 aa20.44■□□□□ 0.86
HOXB3-205ENST00000470495 MBIPQ9NS73 344 aa20.44■□□□□ 0.86
HOXB3-205ENST00000470495 MROH2AA6NES4 1674 aa20.43■□□□□ 0.86
HOXB3-205ENST00000470495 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
HOXB3-205ENST00000470495 TMEM2Q9UHN6 1383 aa20.42■□□□□ 0.86
HOXB3-205ENST00000470495 HSP90AB1P08238 724 aaKnown RBP20.42■□□□□ 0.86
HOXB3-205ENST00000470495 CASC1Q6TDU7 716 aa20.42■□□□□ 0.86
HOXB3-205ENST00000470495 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
HOXB3-205ENST00000470495 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
HOXB3-205ENST00000470495 EIF4A2Q14240 407 aaKnown RBP20.41■□□□□ 0.86
HOXB3-205ENST00000470495 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
HOXB3-205ENST00000470495 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
HOXB3-205ENST00000470495 FKBP5Q13451 457 aaPredicted RBP20.4■□□□□ 0.86
HOXB3-205ENST00000470495 QRICH2Q9H0J4 1663 aa20.4■□□□□ 0.86
HOXB3-205ENST00000470495 ZFYVE9O95405 1425 aa20.4■□□□□ 0.86
HOXB3-205ENST00000470495 HSP90B1P14625 803 aaKnown RBP20.4■□□□□ 0.86
HOXB3-205ENST00000470495 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
HOXB3-205ENST00000470495 IL16Q14005 1332 aa20.39■□□□□ 0.86
HOXB3-205ENST00000470495 SETBP1Q9Y6X0 1596 aa20.39■□□□□ 0.86
HOXB3-205ENST00000470495 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
HOXB3-205ENST00000470495 OS9Q13438 667 aaPredicted RBP20.39■□□□□ 0.85
HOXB3-205ENST00000470495 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
HOXB3-205ENST00000470495 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 NEXMIFQ5QGS0 1516 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 KCNA6P17658 529 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 TEFQ10587 303 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 TULP4Q9NRJ4 1543 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 A0A0G2JS52 829 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 IL13P35225 146 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 PLEKHF1Q96S99 279 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 PDCL3Q9H2J4 239 aa20.38■□□□□ 0.85
HOXB3-205ENST00000470495 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
HOXB3-205ENST00000470495 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
HOXB3-205ENST00000470495 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
HOXB3-205ENST00000470495 PROSER2Q86WR7 435 aaPredicted RBP20.37■□□□□ 0.85
HOXB3-205ENST00000470495 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
HOXB3-205ENST00000470495 HMMRO75330 724 aa20.36■□□□□ 0.85
HOXB3-205ENST00000470495 EDC4Q6P2E9 1401 aaKnown RBP20.36■□□□□ 0.85
HOXB3-205ENST00000470495 KRT24Q2M2I5 525 aa20.36■□□□□ 0.85
HOXB3-205ENST00000470495 ADGRB1O14514 1584 aa20.36■□□□□ 0.85
HOXB3-205ENST00000470495 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
HOXB3-205ENST00000470495 C8orf34Q49A92 452 aa20.35■□□□□ 0.85
HOXB3-205ENST00000470495 ZNF428Q96B54 188 aa20.34■□□□□ 0.85
HOXB3-205ENST00000470495 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
HOXB3-205ENST00000470495 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
HOXB3-205ENST00000470495 ALKQ9UM73 1620 aa20.33■□□□□ 0.85
HOXB3-205ENST00000470495 FOXO3O43524 673 aa20.33■□□□□ 0.85
HOXB3-205ENST00000470495 FAM193AP78312 1265 aa20.33■□□□□ 0.85
HOXB3-205ENST00000470495 C22orf23Q9BZE7 217 aa20.33■□□□□ 0.85
HOXB3-205ENST00000470495 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.85
HOXB3-205ENST00000470495 ROBO2Q9HCK4 1378 aa20.33■□□□□ 0.84
HOXB3-205ENST00000470495 PRR36Q9H6K5 1346 aa20.32■□□□□ 0.84
HOXB3-205ENST00000470495 PIK3C2BO00750 1634 aa20.32■□□□□ 0.84
HOXB3-205ENST00000470495 GOLGA6L3A6NEY3 463 aa20.32■□□□□ 0.84
HOXB3-205ENST00000470495 VAMP4O75379 141 aa20.32■□□□□ 0.84
HOXB3-205ENST00000470495 TBX22Q9Y458 520 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms