RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PLEKHG3A1L390 1219 aa17.76■□□□□ 0.43
LSM2-209ENST00000470083 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
LSM2-209ENST00000470083 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
LSM2-209ENST00000470083 CHD4Q14839 1912 aa17.75■□□□□ 0.43
LSM2-209ENST00000470083 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
LSM2-209ENST00000470083 ARXQ96QS3 562 aa17.75■□□□□ 0.43
LSM2-209ENST00000470083 CDK19Q9BWU1 502 aa17.75■□□□□ 0.43
LSM2-209ENST00000470083 SBF2Q86WG5 1849 aa17.73■□□□□ 0.43
LSM2-209ENST00000470083 CDCA7Q9BWT1 371 aaPredicted RBP17.73■□□□□ 0.43
LSM2-209ENST00000470083 GPR162Q16538 588 aa17.72■□□□□ 0.43
LSM2-209ENST00000470083 TOM1L2Q6ZVM7 507 aa17.72■□□□□ 0.43
LSM2-209ENST00000470083 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.42
LSM2-209ENST00000470083 ZBTB7CA1YPR0 619 aa17.69■□□□□ 0.42
LSM2-209ENST00000470083 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
LSM2-209ENST00000470083 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
LSM2-209ENST00000470083 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
LSM2-209ENST00000470083 BRD4O60885 1362 aaPredicted RBP17.68■□□□□ 0.42
LSM2-209ENST00000470083 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
LSM2-209ENST00000470083 ARHGEF28Q8N1W1 1705 aaKnown RBP17.67■□□□□ 0.42
LSM2-209ENST00000470083 SLIT3O75094 1523 aa17.65■□□□□ 0.42
LSM2-209ENST00000470083 NLRP6P59044 892 aa17.64■□□□□ 0.41
LSM2-209ENST00000470083 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
LSM2-209ENST00000470083 AXIN2Q9Y2T1 843 aa17.64■□□□□ 0.41
LSM2-209ENST00000470083 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
LSM2-209ENST00000470083 EXOC5O00471 708 aa17.63■□□□□ 0.41
LSM2-209ENST00000470083 PAPPAQ13219 1627 aa17.61■□□□□ 0.41
LSM2-209ENST00000470083 SHANK3Q9BYB0 1731 aa17.61■□□□□ 0.41
LSM2-209ENST00000470083 ZNF827Q17R98 1081 aa17.61■□□□□ 0.41
LSM2-209ENST00000470083 CPSF1Q10570 1443 aaKnown RBP17.61■□□□□ 0.41
LSM2-209ENST00000470083 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
LSM2-209ENST00000470083 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
LSM2-209ENST00000470083 SLC16A10Q8TF71 515 aa17.6■□□□□ 0.41
LSM2-209ENST00000470083 USP6P35125 1406 aa17.6■□□□□ 0.41
LSM2-209ENST00000470083 AKAP12Q02952 1782 aa17.6■□□□□ 0.41
LSM2-209ENST00000470083 WNK3Q9BYP7 1800 aa17.6■□□□□ 0.41
LSM2-209ENST00000470083 COL18A1P39060 1754 aa17.59■□□□□ 0.41
LSM2-209ENST00000470083 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
LSM2-209ENST00000470083 POLD1P28340 1107 aa17.59■□□□□ 0.41
LSM2-209ENST00000470083 SRPK2P78362 688 aaKnown RBP17.59■□□□□ 0.41
LSM2-209ENST00000470083 ARHGEF25Q86VW2 580 aa17.59■□□□□ 0.41
LSM2-209ENST00000470083 KLHL34Q8N239 644 aa17.59■□□□□ 0.41
LSM2-209ENST00000470083 CCDC7Q96M83 1385 aa17.58■□□□□ 0.4
LSM2-209ENST00000470083 NHSQ6T4R5 1651 aa17.56■□□□□ 0.4
LSM2-209ENST00000470083 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
LSM2-209ENST00000470083 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
LSM2-209ENST00000470083 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
LSM2-209ENST00000470083 LRRC4BQ9NT99 713 aa17.56■□□□□ 0.4
LSM2-209ENST00000470083 AKT1S1Q96B36 256 aa17.55■□□□□ 0.4
LSM2-209ENST00000470083 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
LSM2-209ENST00000470083 HSPA6P17066 643 aa17.54■□□□□ 0.4
LSM2-209ENST00000470083 KCNH5Q8NCM2 988 aa17.54■□□□□ 0.4
LSM2-209ENST00000470083 CABP1Q9NZU7 370 aa17.54■□□□□ 0.4
LSM2-209ENST00000470083 ATP10DQ9P241 1426 aa17.54■□□□□ 0.4
LSM2-209ENST00000470083 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
LSM2-209ENST00000470083 ABCC6O95255 1503 aa17.53■□□□□ 0.4
LSM2-209ENST00000470083 YBX3P16989 372 aaKnown RBP eCLIP17.53■□□□□ 0.42e-9■■□□□ 14.2
LSM2-209ENST00000470083 PNPLA7Q6ZV29 1317 aa17.52■□□□□ 0.4
LSM2-209ENST00000470083 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
LSM2-209ENST00000470083 SLC27A3Q5K4L6 730 aa17.51■□□□□ 0.39
LSM2-209ENST00000470083 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
LSM2-209ENST00000470083 GPBP1L1Q9HC44 474 aaPredicted RBP17.5■□□□□ 0.39
LSM2-209ENST00000470083 SOX12O15370 315 aa17.49■□□□□ 0.39
LSM2-209ENST00000470083 COL24A1Q17RW2 1714 aa17.48■□□□□ 0.39
LSM2-209ENST00000470083 TFCP2L1Q9NZI6 479 aa17.48■□□□□ 0.39
LSM2-209ENST00000470083 RAB3GAP2Q9H2M9 1393 aa17.48■□□□□ 0.39
LSM2-209ENST00000470083 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
LSM2-209ENST00000470083 IL2RBP14784 551 aa17.47■□□□□ 0.39
LSM2-209ENST00000470083 NFAT5O94916 1531 aa17.47■□□□□ 0.39
LSM2-209ENST00000470083 ADCY9O60503 1353 aa17.46■□□□□ 0.39
LSM2-209ENST00000470083 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
LSM2-209ENST00000470083 BTAF1O14981 1849 aa17.46■□□□□ 0.39
LSM2-209ENST00000470083 ERBB3P21860 1342 aa17.46■□□□□ 0.38
LSM2-209ENST00000470083 QSER1Q2KHR3 1735 aa17.45■□□□□ 0.38
LSM2-209ENST00000470083 NLRP2Q9NX02 1062 aa17.45■□□□□ 0.38
LSM2-209ENST00000470083 QRICH2Q9H0J4 1663 aa17.45■□□□□ 0.38
LSM2-209ENST00000470083 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
LSM2-209ENST00000470083 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
LSM2-209ENST00000470083 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
LSM2-209ENST00000470083 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
LSM2-209ENST00000470083 ZNF526Q8TF50 670 aaPredicted RBP17.41■□□□□ 0.38
LSM2-209ENST00000470083 KCNQ4P56696 695 aa17.4■□□□□ 0.38
LSM2-209ENST00000470083 EVC2Q86UK5 1308 aa17.4■□□□□ 0.38
LSM2-209ENST00000470083 CD2APQ9Y5K6 639 aa17.39■□□□□ 0.37
LSM2-209ENST00000470083 COL23A1Q86Y22 540 aaPredicted RBP17.37■□□□□ 0.37
LSM2-209ENST00000470083 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
LSM2-209ENST00000470083 MSH5O43196 834 aa17.36■□□□□ 0.37
LSM2-209ENST00000470083 APLP1P51693 650 aa17.36■□□□□ 0.37
LSM2-209ENST00000470083 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
LSM2-209ENST00000470083 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
LSM2-209ENST00000470083 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
LSM2-209ENST00000470083 KIF3CO14782 793 aa17.35■□□□□ 0.37
LSM2-209ENST00000470083 PRIM1P49642 420 aaKnown RBP17.35■□□□□ 0.37
LSM2-209ENST00000470083 MSL1Q68DK7 614 aa17.35■□□□□ 0.37
LSM2-209ENST00000470083 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
LSM2-209ENST00000470083 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
LSM2-209ENST00000470083 USP31Q70CQ4 1352 aa17.35■□□□□ 0.37
LSM2-209ENST00000470083 NSD2O96028 1365 aa17.34■□□□□ 0.37
LSM2-209ENST00000470083 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
LSM2-209ENST00000470083 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
LSM2-209ENST00000470083 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms