RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 THRAP3Q9Y2W1 955 aaKnown RBP19.56■□□□□ 0.72
HDAC6-215ENST00000465457 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
HDAC6-215ENST00000465457 CDK19Q9BWU1 502 aa19.54■□□□□ 0.72
HDAC6-215ENST00000465457 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-215ENST00000465457 GOLGB1Q14789 3259 aaKnown RBP19.54■□□□□ 0.72
HDAC6-215ENST00000465457 CEP350Q5VT06 3117 aa19.53■□□□□ 0.72
HDAC6-215ENST00000465457 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
HDAC6-215ENST00000465457 C1QTNF8P60827 252 aa19.53■□□□□ 0.72
HDAC6-215ENST00000465457 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
HDAC6-215ENST00000465457 SLIT3O75094 1523 aa19.52■□□□□ 0.72
HDAC6-215ENST00000465457 PAPPAQ13219 1627 aa19.52■□□□□ 0.72
HDAC6-215ENST00000465457 PIK3C2AO00443 1686 aa19.52■□□□□ 0.71
HDAC6-215ENST00000465457 GCP02774 474 aa19.51■□□□□ 0.71
HDAC6-215ENST00000465457 MARCH10Q8NA82 808 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-215ENST00000465457 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
HDAC6-215ENST00000465457 SGIP1Q9BQI5 828 aa19.51■□□□□ 0.71
HDAC6-215ENST00000465457 DDB1Q16531 1140 aa19.5■□□□□ 0.71
HDAC6-215ENST00000465457 DIEXFQ68CQ4 756 aaKnown RBP19.5■□□□□ 0.71
HDAC6-215ENST00000465457 PLEKHG3A1L390 1219 aa19.48■□□□□ 0.71
HDAC6-215ENST00000465457 CCDC61Q9Y6R9 512 aa19.48■□□□□ 0.71
HDAC6-215ENST00000465457 NHSQ6T4R5 1651 aa19.48■□□□□ 0.71
HDAC6-215ENST00000465457 PPIP5K1Q6PFW1 1433 aa19.48■□□□□ 0.71
HDAC6-215ENST00000465457 TXNRD1Q16881 649 aa19.47■□□□□ 0.71
HDAC6-215ENST00000465457 IFFO2Q5TF58 517 aa19.47■□□□□ 0.71
HDAC6-215ENST00000465457 SHANK3Q9BYB0 1731 aa19.46■□□□□ 0.71
HDAC6-215ENST00000465457 SLC15A2Q16348 729 aa19.46■□□□□ 0.71
HDAC6-215ENST00000465457 AATKQ6ZMQ8 1374 aa19.45■□□□□ 0.7
HDAC6-215ENST00000465457 BCL9O00512 1426 aa19.45■□□□□ 0.7
HDAC6-215ENST00000465457 TOM1L2Q6ZVM7 507 aa19.45■□□□□ 0.7
HDAC6-215ENST00000465457 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
HDAC6-215ENST00000465457 STK32BQ9NY57 414 aa19.45■□□□□ 0.7
HDAC6-215ENST00000465457 AXIN2Q9Y2T1 843 aa19.45■□□□□ 0.7
HDAC6-215ENST00000465457 BTAF1O14981 1849 aa19.44■□□□□ 0.7
HDAC6-215ENST00000465457 QRICH2Q9H0J4 1663 aa19.44■□□□□ 0.7
HDAC6-215ENST00000465457 C11orf95C9JLR9 678 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-215ENST00000465457 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
HDAC6-215ENST00000465457 MTFR1LQ9H019 292 aa19.43■□□□□ 0.7
HDAC6-215ENST00000465457 KIAA1210Q9ULL0 1709 aa19.42■□□□□ 0.7
HDAC6-215ENST00000465457 USP6P35125 1406 aa19.42■□□□□ 0.7
HDAC6-215ENST00000465457 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
HDAC6-215ENST00000465457 TRPM1Q7Z4N2 1603 aa19.41■□□□□ 0.7
HDAC6-215ENST00000465457 WDR17Q8IZU2 1322 aa19.41■□□□□ 0.7
HDAC6-215ENST00000465457 COL24A1Q17RW2 1714 aa19.39■□□□□ 0.7
HDAC6-215ENST00000465457 KAT6BQ8WYB5 2073 aa19.39■□□□□ 0.69
HDAC6-215ENST00000465457 ARXQ96QS3 562 aa19.39■□□□□ 0.69
HDAC6-215ENST00000465457 CABP2Q9NPB3 220 aa19.39■□□□□ 0.69
HDAC6-215ENST00000465457 MAP3K5Q99683 1374 aa19.39■□□□□ 0.69
HDAC6-215ENST00000465457 TNS2Q63HR2 1409 aa19.39■□□□□ 0.69
HDAC6-215ENST00000465457 NLRP6P59044 892 aa19.38■□□□□ 0.69
HDAC6-215ENST00000465457 ZNF827Q17R98 1081 aa19.38■□□□□ 0.69
HDAC6-215ENST00000465457 SRPK2P78362 688 aaKnown RBP19.37■□□□□ 0.69
HDAC6-215ENST00000465457 QSER1Q2KHR3 1735 aa19.37■□□□□ 0.69
HDAC6-215ENST00000465457 ABCC6O95255 1503 aa19.36■□□□□ 0.69
HDAC6-215ENST00000465457 GIGYF1O75420 1035 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-215ENST00000465457 L3MBTL2Q969R5 705 aa19.36■□□□□ 0.69
HDAC6-215ENST00000465457 NFAT5O94916 1531 aa19.35■□□□□ 0.69
HDAC6-215ENST00000465457 ACSBG1Q96GR2 724 aa19.35■□□□□ 0.69
HDAC6-215ENST00000465457 SOX12O15370 315 aa19.34■□□□□ 0.69
HDAC6-215ENST00000465457 GPR162Q16538 588 aa19.34■□□□□ 0.69
HDAC6-215ENST00000465457 NBPF1Q3BBV0 1214 aa19.34■□□□□ 0.69
HDAC6-215ENST00000465457 KLHL34Q8N239 644 aa19.33■□□□□ 0.68
HDAC6-215ENST00000465457 CDCA7Q9BWT1 371 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-215ENST00000465457 CABP1Q9NZU7 370 aa19.32■□□□□ 0.68
HDAC6-215ENST00000465457 ARHGEF25Q86VW2 580 aa19.31■□□□□ 0.68
HDAC6-215ENST00000465457 CARD10Q9BWT7 1032 aa19.31■□□□□ 0.68
HDAC6-215ENST00000465457 LTN1O94822 1766 aa19.31■□□□□ 0.68
HDAC6-215ENST00000465457 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-215ENST00000465457 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
HDAC6-215ENST00000465457 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
HDAC6-215ENST00000465457 NLGN2Q8NFZ4 835 aa19.3■□□□□ 0.68
HDAC6-215ENST00000465457 LRRC4BQ9NT99 713 aa19.3■□□□□ 0.68
HDAC6-215ENST00000465457 CENPJQ9HC77 1338 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-215ENST00000465457 EXOC5O00471 708 aa19.28■□□□□ 0.68
HDAC6-215ENST00000465457 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
HDAC6-215ENST00000465457 CCDC7Q96M83 1385 aa19.26■□□□□ 0.67
HDAC6-215ENST00000465457 MON2Q7Z3U7 1717 aa19.25■□□□□ 0.67
HDAC6-215ENST00000465457 DOT1LQ8TEK3 1739 aa19.25■□□□□ 0.67
HDAC6-215ENST00000465457 PNPLA7Q6ZV29 1317 aa19.25■□□□□ 0.67
HDAC6-215ENST00000465457 YBX3P16989 372 aaKnown RBP eCLIP19.24■□□□□ 0.67
HDAC6-215ENST00000465457 AKT1S1Q96B36 256 aa19.24■□□□□ 0.67
HDAC6-215ENST00000465457 TTC21BQ7Z4L5 1316 aa19.24■□□□□ 0.67
HDAC6-215ENST00000465457 LY75O60449 1722 aa19.23■□□□□ 0.67
HDAC6-215ENST00000465457 KCNQ4P56696 695 aa19.23■□□□□ 0.67
HDAC6-215ENST00000465457 USP54Q70EL1 1684 aa19.23■□□□□ 0.67
HDAC6-215ENST00000465457 EIF4G2P78344 907 aaKnown RBP eCLIP19.22■□□□□ 0.67
HDAC6-215ENST00000465457 ATP10DQ9P241 1426 aa19.22■□□□□ 0.67
HDAC6-215ENST00000465457 ERBB3P21860 1342 aa19.2■□□□□ 0.66
HDAC6-215ENST00000465457 KCNH5Q8NCM2 988 aa19.19■□□□□ 0.66
HDAC6-215ENST00000465457 POLD1P28340 1107 aa19.17■□□□□ 0.66
HDAC6-215ENST00000465457 NLRP2Q9NX02 1062 aa19.17■□□□□ 0.66
HDAC6-215ENST00000465457 IL2RBP14784 551 aa19.16■□□□□ 0.66
HDAC6-215ENST00000465457 RGPD2P0DJD1 1756 aa19.16■□□□□ 0.66
HDAC6-215ENST00000465457 SLC16A10Q8TF71 515 aa19.14■□□□□ 0.65
HDAC6-215ENST00000465457 TTC21AQ8NDW8 1320 aa19.14■□□□□ 0.65
HDAC6-215ENST00000465457 NSD2O96028 1365 aa19.14■□□□□ 0.65
HDAC6-215ENST00000465457 HSPA5P11021 654 aaKnown RBP19.13■□□□□ 0.65
HDAC6-215ENST00000465457 TFCP2L1Q9NZI6 479 aa19.13■□□□□ 0.65
HDAC6-215ENST00000465457 ADCY9O60503 1353 aa19.13■□□□□ 0.65
HDAC6-215ENST00000465457 FAM208AQ9UK61 1670 aaKnown RBP19.12■□□□□ 0.65
HDAC6-215ENST00000465457 KTN1Q86UP2 1357 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms