RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
CNNM3-203ENST00000465224 TBC1D2Q9BYX2 928 aa12.5□□□□□ -0.41
CNNM3-203ENST00000465224 DDX19BQ9UMR2 479 aa12.5□□□□□ -0.41
CNNM3-203ENST00000465224 BECN1Q14457 450 aa12.5□□□□□ -0.41
CNNM3-203ENST00000465224 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
CNNM3-203ENST00000465224 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
CNNM3-203ENST00000465224 ZMYM3Q14202 1370 aa12.49□□□□□ -0.41
CNNM3-203ENST00000465224 ERBB4Q15303 1308 aa12.49□□□□□ -0.41
CNNM3-203ENST00000465224 HMOX1P09601 288 aa12.49□□□□□ -0.41
CNNM3-203ENST00000465224 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
CNNM3-203ENST00000465224 FCHSD2O94868 740 aa12.49□□□□□ -0.41
CNNM3-203ENST00000465224 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
CNNM3-203ENST00000465224 UPF2Q9HAU5 1272 aaKnown RBP12.49□□□□□ -0.41
CNNM3-203ENST00000465224 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
CNNM3-203ENST00000465224 SOCS7O14512 581 aa12.48□□□□□ -0.41
CNNM3-203ENST00000465224 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
CNNM3-203ENST00000465224 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
CNNM3-203ENST00000465224 LRRC7Q96NW7 1537 aa12.48□□□□□ -0.41
CNNM3-203ENST00000465224 TPM2P07951 284 aa12.47□□□□□ -0.41
CNNM3-203ENST00000465224 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
CNNM3-203ENST00000465224 FSD2A1L4K1 749 aa12.47□□□□□ -0.41
CNNM3-203ENST00000465224 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
CNNM3-203ENST00000465224 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
CNNM3-203ENST00000465224 KIF20BQ96Q89 1820 aa12.46□□□□□ -0.41
CNNM3-203ENST00000465224 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
CNNM3-203ENST00000465224 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.41
CNNM3-203ENST00000465224 NME9Q86XW9 330 aa12.46□□□□□ -0.42
CNNM3-203ENST00000465224 ESPNB1AK53 854 aa12.45□□□□□ -0.42
CNNM3-203ENST00000465224 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
CNNM3-203ENST00000465224 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
CNNM3-203ENST00000465224 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
CNNM3-203ENST00000465224 ALDH1L2Q3SY69 923 aa12.45□□□□□ -0.42
CNNM3-203ENST00000465224 C22orf23Q9BZE7 217 aa12.45□□□□□ -0.42
CNNM3-203ENST00000465224 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
CNNM3-203ENST00000465224 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
CNNM3-203ENST00000465224 A2ML1A8K2U0 1454 aa12.45□□□□□ -0.42
CNNM3-203ENST00000465224 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
CNNM3-203ENST00000465224 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
CNNM3-203ENST00000465224 MAP2P11137 1827 aaKnown RBP12.44□□□□□ -0.42
CNNM3-203ENST00000465224 VAMP4O75379 141 aa12.44□□□□□ -0.42
CNNM3-203ENST00000465224 IL13P35225 146 aa12.44□□□□□ -0.42
CNNM3-203ENST00000465224 ZNF830Q96NB3 372 aaPredicted RBP12.44□□□□□ -0.42
CNNM3-203ENST00000465224 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
CNNM3-203ENST00000465224 RIMS2Q9UQ26 1411 aa12.44□□□□□ -0.42
CNNM3-203ENST00000465224 GOLGA6L3A6NEY3 463 aa12.43□□□□□ -0.42
CNNM3-203ENST00000465224 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
CNNM3-203ENST00000465224 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
CNNM3-203ENST00000465224 VGLL3A8MV65 326 aa12.43□□□□□ -0.42
CNNM3-203ENST00000465224 NUCB1Q02818 461 aa12.43□□□□□ -0.42
CNNM3-203ENST00000465224 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
CNNM3-203ENST00000465224 SMAP1Q8IYB5 467 aaPredicted RBP12.43□□□□□ -0.42
CNNM3-203ENST00000465224 MRPL50Q8N5N7 158 aaKnown RBP12.43□□□□□ -0.42
CNNM3-203ENST00000465224 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
CNNM3-203ENST00000465224 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
CNNM3-203ENST00000465224 METP08581 1390 aa12.42□□□□□ -0.42
CNNM3-203ENST00000465224 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
CNNM3-203ENST00000465224 ATP7BP35670 1465 aa12.42□□□□□ -0.42
CNNM3-203ENST00000465224 MBIPQ9NS73 344 aa12.41□□□□□ -0.42
CNNM3-203ENST00000465224 CPSF1Q10570 1443 aaKnown RBP12.41□□□□□ -0.42
CNNM3-203ENST00000465224 PPIP5K1Q6PFW1 1433 aa12.41□□□□□ -0.42
CNNM3-203ENST00000465224 SETD1AO15047 1707 aaKnown RBP12.41□□□□□ -0.42
CNNM3-203ENST00000465224 DLC1Q96QB1 1528 aa12.41□□□□□ -0.42
CNNM3-203ENST00000465224 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
CNNM3-203ENST00000465224 FBXO41Q8TF61 875 aa12.41□□□□□ -0.42
CNNM3-203ENST00000465224 TMEM51Q9NW97 253 aa12.41□□□□□ -0.42
CNNM3-203ENST00000465224 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
CNNM3-203ENST00000465224 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
CNNM3-203ENST00000465224 ZNF853P0CG23 659 aa12.4□□□□□ -0.42
CNNM3-203ENST00000465224 DCTN1Q14203 1278 aa12.4□□□□□ -0.42
CNNM3-203ENST00000465224 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
CNNM3-203ENST00000465224 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
CNNM3-203ENST00000465224 NUDT16Q96DE0 195 aaKnown RBP12.4□□□□□ -0.42
CNNM3-203ENST00000465224 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.43
CNNM3-203ENST00000465224 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.43
CNNM3-203ENST00000465224 CPS1P31327 1500 aa12.39□□□□□ -0.43
CNNM3-203ENST00000465224 LMTK3Q96Q04 1460 aa12.39□□□□□ -0.43
CNNM3-203ENST00000465224 ANKRD45Q5TZF3 282 aa12.39□□□□□ -0.43
CNNM3-203ENST00000465224 EDC4Q6P2E9 1401 aaKnown RBP12.39□□□□□ -0.43
CNNM3-203ENST00000465224 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
CNNM3-203ENST00000465224 GNAI1P63096 354 aa12.38□□□□□ -0.43
CNNM3-203ENST00000465224 NRXN3Q9Y4C0 1643 aa12.38□□□□□ -0.43
CNNM3-203ENST00000465224 SPATA31D1Q6ZQQ2 1576 aa12.38□□□□□ -0.43
CNNM3-203ENST00000465224 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
CNNM3-203ENST00000465224 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
CNNM3-203ENST00000465224 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
CNNM3-203ENST00000465224 ZNF428Q96B54 188 aa12.38□□□□□ -0.43
CNNM3-203ENST00000465224 GZF1Q9H116 711 aaPredicted RBP12.38□□□□□ -0.43
CNNM3-203ENST00000465224 PRDM10Q9NQV6 1147 aa12.38□□□□□ -0.43
CNNM3-203ENST00000465224 TWISTNBQ3B726 338 aaPredicted RBP12.37□□□□□ -0.43
CNNM3-203ENST00000465224 COG3Q96JB2 828 aa12.37□□□□□ -0.43
CNNM3-203ENST00000465224 ARHGAP45Q92619 1136 aa12.37□□□□□ -0.43
CNNM3-203ENST00000465224 PTCH1Q13635 1447 aa12.36□□□□□ -0.43
CNNM3-203ENST00000465224 PIK3R4Q99570 1358 aa12.36□□□□□ -0.43
CNNM3-203ENST00000465224 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
CNNM3-203ENST00000465224 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
CNNM3-203ENST00000465224 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
CNNM3-203ENST00000465224 CCDC61Q9Y6R9 512 aa12.36□□□□□ -0.43
CNNM3-203ENST00000465224 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
CNNM3-203ENST00000465224 CDK12Q9NYV4 1490 aaPredicted RBP12.36□□□□□ -0.43
CNNM3-203ENST00000465224 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms