RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 BCL9O00512 1426 aa13.3□□□□□ -0.28
MDH1-209ENST00000462944 LARP1Q6PKG0 1096 aaKnown RBP13.29□□□□□ -0.28
MDH1-209ENST00000462944 DCAF11Q8TEB1 546 aa13.29□□□□□ -0.28
MDH1-209ENST00000462944 CAPN15O75808 1086 aa13.28□□□□□ -0.28
MDH1-209ENST00000462944 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
MDH1-209ENST00000462944 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
MDH1-209ENST00000462944 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
MDH1-209ENST00000462944 COL18A1P39060 1754 aa13.27□□□□□ -0.28
MDH1-209ENST00000462944 RGPD5Q99666 1765 aa13.27□□□□□ -0.28
MDH1-209ENST00000462944 MYOM1P52179 1685 aa13.27□□□□□ -0.29
MDH1-209ENST00000462944 SLIT3O75094 1523 aa13.26□□□□□ -0.29
MDH1-209ENST00000462944 GCP02774 474 aa13.26□□□□□ -0.29
MDH1-209ENST00000462944 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
MDH1-209ENST00000462944 KAT6BQ8WYB5 2073 aa13.26□□□□□ -0.29
MDH1-209ENST00000462944 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
MDH1-209ENST00000462944 DDB1Q16531 1140 aa13.25□□□□□ -0.29
MDH1-209ENST00000462944 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
MDH1-209ENST00000462944 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
MDH1-209ENST00000462944 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
MDH1-209ENST00000462944 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
MDH1-209ENST00000462944 RAB3GAP2Q9H2M9 1393 aa13.23□□□□□ -0.29
MDH1-209ENST00000462944 ABCC6O95255 1503 aa13.23□□□□□ -0.29
MDH1-209ENST00000462944 PPIP5K1Q6PFW1 1433 aa13.22□□□□□ -0.29
MDH1-209ENST00000462944 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
MDH1-209ENST00000462944 PIK3C2AO00443 1686 aa13.21□□□□□ -0.29
MDH1-209ENST00000462944 USP6P35125 1406 aa13.21□□□□□ -0.3
MDH1-209ENST00000462944 WDR17Q8IZU2 1322 aa13.2□□□□□ -0.3
MDH1-209ENST00000462944 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
MDH1-209ENST00000462944 ZNF784Q8NCA9 323 aaPredicted RBP13.2□□□□□ -0.3
MDH1-209ENST00000462944 STK32BQ9NY57 414 aa13.2□□□□□ -0.3
MDH1-209ENST00000462944 TRPM1Q7Z4N2 1603 aa13.2□□□□□ -0.3
MDH1-209ENST00000462944 MAP3K5Q99683 1374 aa13.2□□□□□ -0.3
MDH1-209ENST00000462944 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
MDH1-209ENST00000462944 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
MDH1-209ENST00000462944 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
MDH1-209ENST00000462944 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
MDH1-209ENST00000462944 PTGER2P43116 358 aa13.18□□□□□ -0.3
MDH1-209ENST00000462944 NLRP6P59044 892 aa13.18□□□□□ -0.3
MDH1-209ENST00000462944 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
MDH1-209ENST00000462944 KCNH5Q8NCM2 988 aa13.18□□□□□ -0.3
MDH1-209ENST00000462944 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
MDH1-209ENST00000462944 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
MDH1-209ENST00000462944 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
MDH1-209ENST00000462944 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
MDH1-209ENST00000462944 BTAF1O14981 1849 aa13.17□□□□□ -0.3
MDH1-209ENST00000462944 CCDC7Q96M83 1385 aa13.17□□□□□ -0.3
MDH1-209ENST00000462944 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
MDH1-209ENST00000462944 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
MDH1-209ENST00000462944 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
MDH1-209ENST00000462944 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
MDH1-209ENST00000462944 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
MDH1-209ENST00000462944 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
MDH1-209ENST00000462944 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
MDH1-209ENST00000462944 LTN1O94822 1766 aa13.15□□□□□ -0.3
MDH1-209ENST00000462944 EXOC5O00471 708 aa13.15□□□□□ -0.3
MDH1-209ENST00000462944 ZBTB7AO95365 584 aa13.15□□□□□ -0.3
MDH1-209ENST00000462944 DSG3P32926 999 aa13.15□□□□□ -0.3
MDH1-209ENST00000462944 PROM2Q8N271 834 aa13.15□□□□□ -0.3
MDH1-209ENST00000462944 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
MDH1-209ENST00000462944 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
MDH1-209ENST00000462944 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.3
MDH1-209ENST00000462944 C1QTNF8P60827 252 aa13.14□□□□□ -0.31
MDH1-209ENST00000462944 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
MDH1-209ENST00000462944 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
MDH1-209ENST00000462944 FAM208AQ9UK61 1670 aaKnown RBP13.13□□□□□ -0.31
MDH1-209ENST00000462944 ARHGEF25Q86VW2 580 aa13.13□□□□□ -0.31
MDH1-209ENST00000462944 SGIP1Q9BQI5 828 aa13.13□□□□□ -0.31
MDH1-209ENST00000462944 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
MDH1-209ENST00000462944 ZBTB7CA1YPR0 619 aa13.12□□□□□ -0.31
MDH1-209ENST00000462944 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
MDH1-209ENST00000462944 EVC2Q86UK5 1308 aa13.12□□□□□ -0.31
MDH1-209ENST00000462944 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
MDH1-209ENST00000462944 ARXQ96QS3 562 aa13.11□□□□□ -0.31
MDH1-209ENST00000462944 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
MDH1-209ENST00000462944 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
MDH1-209ENST00000462944 NFAT5O94916 1531 aa13.11□□□□□ -0.31
MDH1-209ENST00000462944 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
MDH1-209ENST00000462944 PDGFDQ9GZP0 370 aaPredicted RBP13.1□□□□□ -0.31
MDH1-209ENST00000462944 AXIN2Q9Y2T1 843 aa13.1□□□□□ -0.31
MDH1-209ENST00000462944 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
MDH1-209ENST00000462944 LY75O60449 1722 aa13.08□□□□□ -0.32
MDH1-209ENST00000462944 PTF1AQ7RTS3 328 aa13.08□□□□□ -0.32
MDH1-209ENST00000462944 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
MDH1-209ENST00000462944 HMGB2P26583 209 aaKnown RBP13.07□□□□□ -0.32
MDH1-209ENST00000462944 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
MDH1-209ENST00000462944 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
MDH1-209ENST00000462944 POLD1P28340 1107 aa13.06□□□□□ -0.32
MDH1-209ENST00000462944 GPR162Q16538 588 aa13.06□□□□□ -0.32
MDH1-209ENST00000462944 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
MDH1-209ENST00000462944 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
MDH1-209ENST00000462944 IL2RBP14784 551 aa13.05□□□□□ -0.32
MDH1-209ENST00000462944 ERBB3P21860 1342 aa13.04□□□□□ -0.32
MDH1-209ENST00000462944 SHANK3Q9BYB0 1731 aa13.04□□□□□ -0.32
MDH1-209ENST00000462944 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
MDH1-209ENST00000462944 KTN1Q86UP2 1357 aaKnown RBP13.03□□□□□ -0.32
MDH1-209ENST00000462944 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
MDH1-209ENST00000462944 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.33
MDH1-209ENST00000462944 TAF1LQ8IZX4 1826 aa13□□□□□ -0.33
MDH1-209ENST00000462944 SBNO2Q9Y2G9 1366 aa13□□□□□ -0.33
MDH1-209ENST00000462944 AKT1S1Q96B36 256 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms