RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
KCNMA1-216ENST00000457953 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
KCNMA1-216ENST00000457953 PRDM10Q9NQV6 1147 aa16.41■□□□□ 0.22
KCNMA1-216ENST00000457953 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
KCNMA1-216ENST00000457953 SPC24Q8NBT2 197 aa16.4■□□□□ 0.22
KCNMA1-216ENST00000457953 SLFN5Q08AF3 891 aa16.4■□□□□ 0.22
KCNMA1-216ENST00000457953 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
KCNMA1-216ENST00000457953 CSPP1Q1MSJ5 1256 aa16.39■□□□□ 0.21
KCNMA1-216ENST00000457953 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
KCNMA1-216ENST00000457953 GORABQ5T7V8 394 aa16.39■□□□□ 0.21
KCNMA1-216ENST00000457953 CLCN1P35523 988 aa16.39■□□□□ 0.21
KCNMA1-216ENST00000457953 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
KCNMA1-216ENST00000457953 HOMER1Q86YM7 354 aa16.38■□□□□ 0.21
KCNMA1-216ENST00000457953 FAM184AQ8NB25 1140 aa16.38■□□□□ 0.21
KCNMA1-216ENST00000457953 PES1O00541 588 aaKnown RBP16.38■□□□□ 0.21
KCNMA1-216ENST00000457953 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
KCNMA1-216ENST00000457953 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
KCNMA1-216ENST00000457953 ASXL1Q8IXJ9 1541 aa16.38■□□□□ 0.21
KCNMA1-216ENST00000457953 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
KCNMA1-216ENST00000457953 VWDEQ8N2E2 1590 aa16.37■□□□□ 0.21
KCNMA1-216ENST00000457953 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
KCNMA1-216ENST00000457953 FIBPO43427 364 aa16.37■□□□□ 0.21
KCNMA1-216ENST00000457953 GNAI1P63096 354 aa16.37■□□□□ 0.21
KCNMA1-216ENST00000457953 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 CARD14Q9BXL6 1004 aa16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 DIAPH3Q9NSV4 1193 aa16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 ATP6V1DQ9Y5K8 247 aa16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 C14orf93Q9H972 538 aaKnown RBP16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 XRCC6P12956 609 aaKnown RBP eCLIP16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 DUSP27Q5VZP5 1158 aa16.36■□□□□ 0.21
KCNMA1-216ENST00000457953 MCM10Q7L590 875 aa16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 SMC3Q9UQE7 1217 aa16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 TPM4P67936 248 aa16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 C1orf141Q5JVX7 400 aa16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 PANK2Q9BZ23 570 aa16.35■□□□□ 0.21
KCNMA1-216ENST00000457953 MYOM1P52179 1685 aa16.34■□□□□ 0.21
KCNMA1-216ENST00000457953 KDM2BQ8NHM5 1336 aa16.34■□□□□ 0.21
KCNMA1-216ENST00000457953 UQCRHLA0A096LP55 91 aa16.33■□□□□ 0.21
KCNMA1-216ENST00000457953 UQCRHP07919 91 aa16.33■□□□□ 0.21
KCNMA1-216ENST00000457953 USHBP1Q8N6Y0 703 aa16.33■□□□□ 0.21
KCNMA1-216ENST00000457953 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.21
KCNMA1-216ENST00000457953 ATP7AQ04656 1500 aa16.33■□□□□ 0.2
KCNMA1-216ENST00000457953 ABCA9Q8IUA7 1624 aa16.33■□□□□ 0.2
KCNMA1-216ENST00000457953 TPM2P07951 284 aa16.33■□□□□ 0.2
KCNMA1-216ENST00000457953 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
KCNMA1-216ENST00000457953 PDE3AQ14432 1141 aa16.33■□□□□ 0.2
KCNMA1-216ENST00000457953 GOLGA6L1Q8N7Z2 621 aa16.33■□□□□ 0.2
KCNMA1-216ENST00000457953 MYOM2P54296 1465 aa16.33■□□□□ 0.2
KCNMA1-216ENST00000457953 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
KCNMA1-216ENST00000457953 CDC45O75419 566 aa16.32■□□□□ 0.2
KCNMA1-216ENST00000457953 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
KCNMA1-216ENST00000457953 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
KCNMA1-216ENST00000457953 SSH1Q8WYL5 1049 aa16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 SYTL4Q96C24 671 aaPredicted RBP16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 SKIDA1Q1XH10 827 aa16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 TRIM5Q9C035 493 aa16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 ZNF521Q96K83 1311 aa16.31■□□□□ 0.2
KCNMA1-216ENST00000457953 CCDC173Q0VFZ6 552 aa16.3■□□□□ 0.2
KCNMA1-216ENST00000457953 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-216ENST00000457953 ZC3H6P61129 1189 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-216ENST00000457953 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
KCNMA1-216ENST00000457953 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
KCNMA1-216ENST00000457953 MAP3K4Q9Y6R4 1608 aa16.3■□□□□ 0.2
KCNMA1-216ENST00000457953 ZKSCAN1P17029 563 aaPredicted RBP16.3■□□□□ 0.2
KCNMA1-216ENST00000457953 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
KCNMA1-216ENST00000457953 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
KCNMA1-216ENST00000457953 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
KCNMA1-216ENST00000457953 KIF1BO60333 1816 aa16.29■□□□□ 0.2
KCNMA1-216ENST00000457953 KDM4AO75164 1064 aa16.29■□□□□ 0.2
KCNMA1-216ENST00000457953 TMEM57Q8N5G2 664 aa16.29■□□□□ 0.2
KCNMA1-216ENST00000457953 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 RARSP54136 660 aaKnown RBP16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 FOXO3O43524 673 aa16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 AMOTL2Q9Y2J4 779 aa16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 SASS6Q6UVJ0 657 aa16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
KCNMA1-216ENST00000457953 CLSTN1O94985 981 aa16.27■□□□□ 0.2
KCNMA1-216ENST00000457953 FYB1O15117 783 aa16.27■□□□□ 0.19
KCNMA1-216ENST00000457953 IFT172Q9UG01 1749 aa16.27■□□□□ 0.19
KCNMA1-216ENST00000457953 SYCE3A1L190 88 aa16.27■□□□□ 0.19
KCNMA1-216ENST00000457953 EVA1CP58658 441 aa16.27■□□□□ 0.19
KCNMA1-216ENST00000457953 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.19
KCNMA1-216ENST00000457953 TPM3P06753 285 aa16.26■□□□□ 0.19
KCNMA1-216ENST00000457953 TAF7LQ5H9L4 462 aa16.26■□□□□ 0.19
KCNMA1-216ENST00000457953 MYO3AQ8NEV4 1616 aa16.26■□□□□ 0.19
KCNMA1-216ENST00000457953 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms