RNA–Protein interactions for RNA: ENST00000453133.1

USP34-204, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-204ENST00000453133 CDV3Q9UKY7 258 aaKnown RBP10.24□□□□□ -0.77
USP34-204ENST00000453133 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
USP34-204ENST00000453133 J3QL48 77 aa10.24□□□□□ -0.77
USP34-204ENST00000453133 FSHRP23945 695 aa10.24□□□□□ -0.77
USP34-204ENST00000453133 MAP4K5Q9Y4K4 846 aa10.24□□□□□ -0.77
USP34-204ENST00000453133 WASF2Q9Y6W5 498 aa10.24□□□□□ -0.77
USP34-204ENST00000453133 PIK3CDO00329 1044 aa10.23□□□□□ -0.77
USP34-204ENST00000453133 GRM5P41594 1212 aa10.23□□□□□ -0.77
USP34-204ENST00000453133 SLFNL1Q499Z3 407 aa10.23□□□□□ -0.77
USP34-204ENST00000453133 ADH1CP00326 375 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 PRR20EP86478 221 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 PRR20CP86479 221 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 PRR20DP86480 221 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 PRR20BP86481 221 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 PRR20AP86496 221 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 MPNDQ8N594 471 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 ARID3AQ99856 593 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 TOR4AQ9NXH8 423 aa10.22□□□□□ -0.77
USP34-204ENST00000453133 RNF135Q8IUD6 432 aa10.21□□□□□ -0.78
USP34-204ENST00000453133 UCN2Q96RP3 112 aa10.21□□□□□ -0.78
USP34-204ENST00000453133 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
USP34-204ENST00000453133 CCDC82Q8N4S0 544 aa10.2□□□□□ -0.78
USP34-204ENST00000453133 CCDC97Q96F63 343 aaPredicted RBP10.2□□□□□ -0.78
USP34-204ENST00000453133 ESPNB1AK53 854 aa10.19□□□□□ -0.78
USP34-204ENST00000453133 SKIP12755 728 aa10.19□□□□□ -0.78
USP34-204ENST00000453133 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
USP34-204ENST00000453133 GFRA3O60609 400 aa10.18□□□□□ -0.78
USP34-204ENST00000453133 NR3C2P08235 984 aa10.18□□□□□ -0.78
USP34-204ENST00000453133 SMPD1P17405 629 aa10.18□□□□□ -0.78
USP34-204ENST00000453133 NNTQ13423 1086 aa10.18□□□□□ -0.78
USP34-204ENST00000453133 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
USP34-204ENST00000453133 PHTF2Q8N3S3 785 aa10.18□□□□□ -0.78
USP34-204ENST00000453133 CCDC85AQ96PX6 553 aaPredicted RBP10.18□□□□□ -0.78
USP34-204ENST00000453133 NR5A1Q13285 461 aa10.17□□□□□ -0.78
USP34-204ENST00000453133 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
USP34-204ENST00000453133 TFIP11Q9UBB9 837 aaKnown RBP10.17□□□□□ -0.78
USP34-204ENST00000453133 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 PPP1R12CQ9BZL4 782 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 TMPRSS4Q9NRS4 437 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 PCDHB11Q9Y5F2 797 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 PALM3A6NDB9 673 aaPredicted RBP10.16□□□□□ -0.78
USP34-204ENST00000453133 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 SEPT12Q8IYM1 358 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 SERPINA10Q9UK55 444 aa10.16□□□□□ -0.78
USP34-204ENST00000453133 RFX1P22670 979 aa10.15□□□□□ -0.79
USP34-204ENST00000453133 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.79
USP34-204ENST00000453133 DEPDC4Q8N2C3 294 aa10.15□□□□□ -0.79
USP34-204ENST00000453133 PLPP7Q8NBV4 271 aa10.15□□□□□ -0.79
USP34-204ENST00000453133 HPS1Q92902 700 aa10.15□□□□□ -0.79
USP34-204ENST00000453133 CDCA7Q9BWT1 371 aaPredicted RBP10.15□□□□□ -0.79
USP34-204ENST00000453133 DOLKQ9UPQ8 538 aa10.15□□□□□ -0.79
USP34-204ENST00000453133 ATP9BO43861 1147 aa10.14□□□□□ -0.79
USP34-204ENST00000453133 OXLD1Q5BKU9 147 aa10.14□□□□□ -0.79
USP34-204ENST00000453133 LMOD1P29536 600 aaPredicted RBP10.13□□□□□ -0.79
USP34-204ENST00000453133 DHX9Q08211 1270 aaKnown RBP10.13□□□□□ -0.79
USP34-204ENST00000453133 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
USP34-204ENST00000453133 WDR4P57081 412 aaKnown RBP10.11□□□□□ -0.79
USP34-204ENST00000453133 TRAF7Q6Q0C0 670 aa10.11□□□□□ -0.79
USP34-204ENST00000453133 ZNF784Q8NCA9 323 aaPredicted RBP10.11□□□□□ -0.79
USP34-204ENST00000453133 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
USP34-204ENST00000453133 CYLDQ9NQC7 956 aa10.11□□□□□ -0.79
USP34-204ENST00000453133 MAFBQ9Y5Q3 323 aaPredicted RBP10.11□□□□□ -0.79
USP34-204ENST00000453133 NISCHQ9Y2I1 1504 aa10.11□□□□□ -0.79
USP34-204ENST00000453133 NRG2O14511 850 aaPredicted RBP10.1□□□□□ -0.79
USP34-204ENST00000453133 ZIC2O95409 532 aaPredicted RBP10.1□□□□□ -0.79
USP34-204ENST00000453133 NCOA4Q13772 614 aa10.1□□□□□ -0.79
USP34-204ENST00000453133 MAP7D1Q3KQU3 841 aa10.1□□□□□ -0.79
USP34-204ENST00000453133 CFAP70Q5T0N1 1121 aa10.1□□□□□ -0.79
USP34-204ENST00000453133 ITPKCQ96DU7 683 aa10.1□□□□□ -0.79
USP34-204ENST00000453133 CHIC2Q9UKJ5 165 aa10.1□□□□□ -0.79
USP34-204ENST00000453133 EMILIN1Q9Y6C2 1016 aa10.1□□□□□ -0.79
USP34-204ENST00000453133 USP17L3A6NCW0 530 aa10.09□□□□□ -0.79
USP34-204ENST00000453133 USP17L4A6NCW7 530 aa10.09□□□□□ -0.79
USP34-204ENST00000453133 PKDCCQ504Y2 493 aa10.09□□□□□ -0.79
USP34-204ENST00000453133 USP17L2Q6R6M4 530 aa10.09□□□□□ -0.79
USP34-204ENST00000453133 USP17L1Q7RTZ2 530 aa10.09□□□□□ -0.79
USP34-204ENST00000453133 IRX2Q9BZI1 471 aaPredicted RBP10.09□□□□□ -0.79
USP34-204ENST00000453133 ZFAND3Q9H8U3 227 aa10.09□□□□□ -0.79
USP34-204ENST00000453133 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
USP34-204ENST00000453133 SCTRP47872 440 aa10.08□□□□□ -0.8
USP34-204ENST00000453133 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
USP34-204ENST00000453133 CCDC125Q86Z20 511 aa10.08□□□□□ -0.8
USP34-204ENST00000453133 TIMP2P16035 220 aa10.07□□□□□ -0.8
USP34-204ENST00000453133 MYT1Q01538 1121 aa10.07□□□□□ -0.8
USP34-204ENST00000453133 EML3Q32P44 896 aa10.07□□□□□ -0.8
USP34-204ENST00000453133 KLF16Q9BXK1 252 aaPredicted RBP10.07□□□□□ -0.8
USP34-204ENST00000453133 ESF1Q9H501 851 aaKnown RBP10.07□□□□□ -0.8
USP34-204ENST00000453133 CBLBQ13191 982 aa10.07□□□□□ -0.8
USP34-204ENST00000453133 CC2D2BQ6DHV5 1058 aa10.07□□□□□ -0.8
USP34-204ENST00000453133 LILRA1O75019 489 aa10.06□□□□□ -0.8
USP34-204ENST00000453133 DGAT1O75907 488 aa10.06□□□□□ -0.8
USP34-204ENST00000453133 MYCP01106 439 aaPredicted RBP10.06□□□□□ -0.8
USP34-204ENST00000453133 ADD1P35611 737 aaKnown RBP10.06□□□□□ -0.8
USP34-204ENST00000453133 USP4Q13107 963 aa10.06□□□□□ -0.8
USP34-204ENST00000453133 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.05□□□□□ -0.8
USP34-204ENST00000453133 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
USP34-204ENST00000453133 ERVK-9P63128 1117 aa10.05□□□□□ -0.8
USP34-204ENST00000453133 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
USP34-204ENST00000453133 PLEKHM2Q8IWE5 1019 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms