RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
PBX3-207ENST00000447726 CDC42BPGQ6DT37 1551 aa20.46■□□□□ 0.87
PBX3-207ENST00000447726 TNPO1Q92973 898 aaKnown RBP20.46■□□□□ 0.87
PBX3-207ENST00000447726 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
PBX3-207ENST00000447726 PREX1Q8TCU6 1659 aa20.46■□□□□ 0.87
PBX3-207ENST00000447726 HSP90AB1P08238 724 aaKnown RBP20.46■□□□□ 0.87
PBX3-207ENST00000447726 TBC1D9Q6ZT07 1266 aa20.46■□□□□ 0.87
PBX3-207ENST00000447726 ARHGAP45Q92619 1136 aa20.46■□□□□ 0.87
PBX3-207ENST00000447726 DDX11L8A8MPP1 907 aa20.45■□□□□ 0.86
PBX3-207ENST00000447726 FOXD4L1Q9NU39 408 aa20.45■□□□□ 0.86
PBX3-207ENST00000447726 PIK3R4Q99570 1358 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 IL13P35225 146 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 GNAI1P63096 354 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
PBX3-207ENST00000447726 IFT57Q9NWB7 429 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 PTCH1Q13635 1447 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 NME9Q86XW9 330 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
PBX3-207ENST00000447726 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
PBX3-207ENST00000447726 PRKCSHP14314 528 aaPredicted RBP20.43■□□□□ 0.86
PBX3-207ENST00000447726 TWISTNBQ3B726 338 aaPredicted RBP20.43■□□□□ 0.86
PBX3-207ENST00000447726 ABCC4O15439 1325 aa20.43■□□□□ 0.86
PBX3-207ENST00000447726 FAM83GA6ND36 823 aa20.42■□□□□ 0.86
PBX3-207ENST00000447726 CALD1Q05682 793 aaKnown RBP20.42■□□□□ 0.86
PBX3-207ENST00000447726 RICTORQ6R327 1708 aa20.41■□□□□ 0.86
PBX3-207ENST00000447726 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
PBX3-207ENST00000447726 DCTN1Q14203 1278 aa20.4■□□□□ 0.86
PBX3-207ENST00000447726 MRE11P49959 708 aa20.4■□□□□ 0.86
PBX3-207ENST00000447726 RAB3GAP1Q15042 981 aa20.4■□□□□ 0.86
PBX3-207ENST00000447726 HSP90AA1P07900 732 aaKnown RBP20.39■□□□□ 0.85
PBX3-207ENST00000447726 RRS1Q15050 365 aaKnown RBP20.39■□□□□ 0.85
PBX3-207ENST00000447726 CIZ1Q9ULV3 898 aaPredicted RBP20.39■□□□□ 0.85
PBX3-207ENST00000447726 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.85
PBX3-207ENST00000447726 ATP7BP35670 1465 aa20.39■□□□□ 0.85
PBX3-207ENST00000447726 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
PBX3-207ENST00000447726 GRPEL1Q9HAV7 217 aa20.39■□□□□ 0.85
PBX3-207ENST00000447726 NCKAP5LQ9HCH0 1330 aa20.39■□□□□ 0.85
PBX3-207ENST00000447726 K7ELQ4 463 aaPredicted RBP20.37■□□□□ 0.85
PBX3-207ENST00000447726 GSPT1P15170 499 aaKnown RBP20.37■□□□□ 0.85
PBX3-207ENST00000447726 GBP4Q96PP9 640 aa20.36■□□□□ 0.85
PBX3-207ENST00000447726 GAS2L3Q86XJ1 694 aa20.35■□□□□ 0.85
PBX3-207ENST00000447726 GAS2L2Q8NHY3 880 aa20.35■□□□□ 0.85
PBX3-207ENST00000447726 API5Q9BZZ5 524 aaKnown RBP20.35■□□□□ 0.85
PBX3-207ENST00000447726 CDC45O75419 566 aa20.35■□□□□ 0.85
PBX3-207ENST00000447726 CPSF1Q10570 1443 aaKnown RBP20.35■□□□□ 0.85
PBX3-207ENST00000447726 WASLO00401 505 aaPredicted RBP20.34■□□□□ 0.85
PBX3-207ENST00000447726 PLEKHM2Q8IWE5 1019 aa20.34■□□□□ 0.85
PBX3-207ENST00000447726 EDC4Q6P2E9 1401 aaKnown RBP20.34■□□□□ 0.85
PBX3-207ENST00000447726 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
PBX3-207ENST00000447726 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
PBX3-207ENST00000447726 RIMS2Q9UQ26 1411 aa20.33■□□□□ 0.84
PBX3-207ENST00000447726 SSFA2P28290 1259 aa20.33■□□□□ 0.84
PBX3-207ENST00000447726 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.84
PBX3-207ENST00000447726 CDK12Q9NYV4 1490 aaPredicted RBP20.32■□□□□ 0.84
PBX3-207ENST00000447726 COG3Q96JB2 828 aa20.32■□□□□ 0.84
PBX3-207ENST00000447726 TXNDC2Q86VQ3 553 aa20.32■□□□□ 0.84
PBX3-207ENST00000447726 DCTPP1Q9H773 170 aa20.31■□□□□ 0.84
PBX3-207ENST00000447726 DLC1Q96QB1 1528 aa20.31■□□□□ 0.84
PBX3-207ENST00000447726 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
PBX3-207ENST00000447726 AEBP1Q8IUX7 1158 aa20.3■□□□□ 0.84
PBX3-207ENST00000447726 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
PBX3-207ENST00000447726 NUDT16Q96DE0 195 aaKnown RBP20.3■□□□□ 0.84
PBX3-207ENST00000447726 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
PBX3-207ENST00000447726 CLCN1P35523 988 aa20.29■□□□□ 0.84
PBX3-207ENST00000447726 CPS1P31327 1500 aa20.29■□□□□ 0.84
PBX3-207ENST00000447726 ISY1Q9ULR0 285 aaKnown RBP20.29■□□□□ 0.84
PBX3-207ENST00000447726 KNDC1Q76NI1 1749 aa20.28■□□□□ 0.84
PBX3-207ENST00000447726 METP08581 1390 aa20.28■□□□□ 0.84
PBX3-207ENST00000447726 TTC22Q5TAA0 569 aa20.28■□□□□ 0.84
PBX3-207ENST00000447726 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
PBX3-207ENST00000447726 SKOR2Q2VWA4 1001 aaPredicted RBP20.27■□□□□ 0.84
PBX3-207ENST00000447726 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
PBX3-207ENST00000447726 APBB1O00213 710 aa20.27■□□□□ 0.83
PBX3-207ENST00000447726 CCDC61Q9Y6R9 512 aa20.27■□□□□ 0.83
PBX3-207ENST00000447726 SULT6B1Q6IMI4 303 aa20.26■□□□□ 0.83
PBX3-207ENST00000447726 MLECQ14165 292 aa20.26■□□□□ 0.83
PBX3-207ENST00000447726 ERBB4Q15303 1308 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 SMARCA5O60264 1052 aaPredicted RBP20.25■□□□□ 0.83
PBX3-207ENST00000447726 MCM10Q7L590 875 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 ANKRD44Q8N8A2 993 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 RIMBP3CA6NJZ7 1639 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 RIMBP3BA6NNM3 1639 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 RIMBP3Q9UFD9 1639 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 ATP10DQ9P241 1426 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 KIF24Q5T7B8 1368 aa20.25■□□□□ 0.83
PBX3-207ENST00000447726 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
PBX3-207ENST00000447726 CEP85Q6P2H3 762 aa20.24■□□□□ 0.83
PBX3-207ENST00000447726 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
PBX3-207ENST00000447726 EIF4A2Q14240 407 aaKnown RBP20.23■□□□□ 0.83
PBX3-207ENST00000447726 RABEP1Q15276 862 aa20.23■□□□□ 0.83
PBX3-207ENST00000447726 RGS12O14924 1447 aa20.23■□□□□ 0.83
PBX3-207ENST00000447726 SETD1AO15047 1707 aaKnown RBP20.23■□□□□ 0.83
PBX3-207ENST00000447726 NAP1L5Q96NT1 182 aaPredicted RBP20.23■□□□□ 0.83
PBX3-207ENST00000447726 ESPNB1AK53 854 aa20.23■□□□□ 0.83
PBX3-207ENST00000447726 SDSP20132 328 aa20.22■□□□□ 0.83
PBX3-207ENST00000447726 MEIS3Q99687 375 aa20.22■□□□□ 0.83
PBX3-207ENST00000447726 CHL1O00533 1208 aa20.22■□□□□ 0.83
PBX3-207ENST00000447726 PTMSP20962 102 aa20.22■□□□□ 0.83
PBX3-207ENST00000447726 PRR36Q9H6K5 1346 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms