RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 HDGFL1Q5TGJ6 251 aa20.11■□□□□ 0.81
TCOF1-206ENST00000445265 LRRFIP1Q32MZ4 808 aaKnown RBP20.1■□□□□ 0.81
TCOF1-206ENST00000445265 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
TCOF1-206ENST00000445265 EMILIN1Q9Y6C2 1016 aa20.1■□□□□ 0.81
TCOF1-206ENST00000445265 CDK11BP21127 795 aaKnown RBP20.1■□□□□ 0.81
TCOF1-206ENST00000445265 ABTB2Q8N961 1025 aa20.1■□□□□ 0.81
TCOF1-206ENST00000445265 ARHGAP45Q92619 1136 aa20.1■□□□□ 0.81
TCOF1-206ENST00000445265 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
TCOF1-206ENST00000445265 CCDC34Q96HJ3 373 aa20.09■□□□□ 0.81
TCOF1-206ENST00000445265 DENND4BO75064 1496 aaPredicted RBP20.09■□□□□ 0.81
TCOF1-206ENST00000445265 NME9Q86XW9 330 aa20.09■□□□□ 0.81
TCOF1-206ENST00000445265 BECN2A8MW95 431 aa20.09■□□□□ 0.81
TCOF1-206ENST00000445265 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
TCOF1-206ENST00000445265 RNF214Q8ND24 703 aa20.09■□□□□ 0.81
TCOF1-206ENST00000445265 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
TCOF1-206ENST00000445265 ESPNB1AK53 854 aa20.08■□□□□ 0.81
TCOF1-206ENST00000445265 LETM1O95202 739 aaPredicted RBP20.08■□□□□ 0.81
TCOF1-206ENST00000445265 FYB1O15117 783 aa20.08■□□□□ 0.81
TCOF1-206ENST00000445265 ABCC2Q92887 1545 aa20.08■□□□□ 0.8
TCOF1-206ENST00000445265 PSMA5P28066 241 aa20.08■□□□□ 0.8
TCOF1-206ENST00000445265 WASLO00401 505 aaPredicted RBP20.07■□□□□ 0.8
TCOF1-206ENST00000445265 NUCB1Q02818 461 aa20.07■□□□□ 0.8
TCOF1-206ENST00000445265 TSPY26PQ9H489 355 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 WDR7Q9Y4E6 1490 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 RLBP1P12271 317 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 BICD2Q8TD16 824 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 MBD5Q9P267 1494 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 ERC1Q8IUD2 1116 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 CEP170Q5SW79 1584 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 WDR33Q9C0J8 1336 aaKnown RBP20.06■□□□□ 0.8
TCOF1-206ENST00000445265 TPM2P07951 284 aa20.06■□□□□ 0.8
TCOF1-206ENST00000445265 HIP1O00291 1037 aa20.05■□□□□ 0.8
TCOF1-206ENST00000445265 PLEKHO1Q53GL0 409 aaPredicted RBP20.05■□□□□ 0.8
TCOF1-206ENST00000445265 RIC3Q7Z5B4 369 aa20.05■□□□□ 0.8
TCOF1-206ENST00000445265 RAPGEF4Q8WZA2 1011 aa20.04■□□□□ 0.8
TCOF1-206ENST00000445265 TNPO1Q92973 898 aaKnown RBP20.04■□□□□ 0.8
TCOF1-206ENST00000445265 MCM10Q7L590 875 aa20.04■□□□□ 0.8
TCOF1-206ENST00000445265 CCDC9Q9Y3X0 531 aaKnown RBP20.04■□□□□ 0.8
TCOF1-206ENST00000445265 PDCP20941 246 aa20.04■□□□□ 0.8
TCOF1-206ENST00000445265 TBC1D9Q6ZT07 1266 aa20.04■□□□□ 0.8
TCOF1-206ENST00000445265 FAM13BQ9NYF5 915 aa20.04■□□□□ 0.8
TCOF1-206ENST00000445265 FBXO31Q5XUX0 539 aaPredicted RBP20.03■□□□□ 0.8
TCOF1-206ENST00000445265 NPHP1O15259 732 aa20.03■□□□□ 0.8
TCOF1-206ENST00000445265 MBIPQ9NS73 344 aa20.02■□□□□ 0.8
TCOF1-206ENST00000445265 PTPRCP08575 1304 aa20.02■□□□□ 0.8
TCOF1-206ENST00000445265 R3HCC1Q9Y3T6 440 aaKnown RBP20.02■□□□□ 0.8
TCOF1-206ENST00000445265 ASXL2Q76L83 1435 aa20.02■□□□□ 0.8
TCOF1-206ENST00000445265 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
TCOF1-206ENST00000445265 FSD1Q9BTV5 496 aa20.01■□□□□ 0.79
TCOF1-206ENST00000445265 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
TCOF1-206ENST00000445265 TNNQ9UQP3 1299 aa20.01■□□□□ 0.79
TCOF1-206ENST00000445265 EXOC6BQ9Y2D4 811 aa20.01■□□□□ 0.79
TCOF1-206ENST00000445265 SASS6Q6UVJ0 657 aa20.01■□□□□ 0.79
TCOF1-206ENST00000445265 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
TCOF1-206ENST00000445265 CPLX2Q6PUV4 134 aaKnown RBP20.01■□□□□ 0.79
TCOF1-206ENST00000445265 SMC5Q8IY18 1101 aa20■□□□□ 0.79
TCOF1-206ENST00000445265 THEMISQ8N1K5 641 aaPredicted RBP20■□□□□ 0.79
TCOF1-206ENST00000445265 TPM3P06753 285 aa20■□□□□ 0.79
TCOF1-206ENST00000445265 MAP7D2Q96T17 732 aa19.99■□□□□ 0.79
TCOF1-206ENST00000445265 SLC26A8Q96RN1 970 aa19.99■□□□□ 0.79
TCOF1-206ENST00000445265 MX1P20591 662 aa19.99■□□□□ 0.79
TCOF1-206ENST00000445265 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
TCOF1-206ENST00000445265 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
TCOF1-206ENST00000445265 SMARCA5O60264 1052 aaPredicted RBP19.98■□□□□ 0.79
TCOF1-206ENST00000445265 CYP46A1Q9Y6A2 500 aa19.98■□□□□ 0.79
TCOF1-206ENST00000445265 ABCA8O94911 1581 aa19.98■□□□□ 0.79
TCOF1-206ENST00000445265 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
TCOF1-206ENST00000445265 FIBPO43427 364 aa19.97■□□□□ 0.79
TCOF1-206ENST00000445265 AEBP1Q8IUX7 1158 aa19.97■□□□□ 0.79
TCOF1-206ENST00000445265 SSFA2P28290 1259 aa19.97■□□□□ 0.79
TCOF1-206ENST00000445265 MTERF4Q7Z6M4 381 aaKnown RBP19.97■□□□□ 0.79
TCOF1-206ENST00000445265 SNX21Q969T3 373 aa19.97■□□□□ 0.79
TCOF1-206ENST00000445265 CCDC73Q6ZRK6 1079 aa19.97■□□□□ 0.79
TCOF1-206ENST00000445265 SEC24BO95487 1268 aa19.97■□□□□ 0.79
TCOF1-206ENST00000445265 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
TCOF1-206ENST00000445265 CPLX1O14810 134 aa19.96■□□□□ 0.79
TCOF1-206ENST00000445265 IL1RAPL2Q9NP60 686 aa19.96■□□□□ 0.79
TCOF1-206ENST00000445265 ZBTB40Q9NUA8 1239 aa19.96■□□□□ 0.79
TCOF1-206ENST00000445265 ZNF530Q6P9A1 599 aaPredicted RBP19.96■□□□□ 0.79
TCOF1-206ENST00000445265 ZSCAN30Q86W11 494 aa19.95■□□□□ 0.78
TCOF1-206ENST00000445265 TTC22Q5TAA0 569 aa19.95■□□□□ 0.78
TCOF1-206ENST00000445265 TTC21BQ7Z4L5 1316 aa19.95■□□□□ 0.78
TCOF1-206ENST00000445265 NLRP2Q9NX02 1062 aa19.95■□□□□ 0.78
TCOF1-206ENST00000445265 MRPL50Q8N5N7 158 aaKnown RBP19.95■□□□□ 0.78
TCOF1-206ENST00000445265 TOMM22Q9NS69 142 aa19.95■□□□□ 0.78
TCOF1-206ENST00000445265 RAB11FIP3O75154 756 aa19.94■□□□□ 0.78
TCOF1-206ENST00000445265 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
TCOF1-206ENST00000445265 ANKRD1Q15327 319 aa19.93■□□□□ 0.78
TCOF1-206ENST00000445265 KIF1BPQ96EK5 621 aa19.93■□□□□ 0.78
TCOF1-206ENST00000445265 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
TCOF1-206ENST00000445265 A0A1W2PP64 1363 aa19.93■□□□□ 0.78
TCOF1-206ENST00000445265 ZSCAN31Q96LW9 406 aaPredicted RBP19.93■□□□□ 0.78
TCOF1-206ENST00000445265 POLKQ9UBT6 870 aa19.93■□□□□ 0.78
TCOF1-206ENST00000445265 KDM5DQ9BY66 1539 aa19.93■□□□□ 0.78
TCOF1-206ENST00000445265 MAGI2Q86UL8 1455 aa19.93■□□□□ 0.78
TCOF1-206ENST00000445265 ZFYVE9O95405 1425 aa19.92■□□□□ 0.78
TCOF1-206ENST00000445265 FAM83GA6ND36 823 aa19.92■□□□□ 0.78
TCOF1-206ENST00000445265 PDIA4P13667 645 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms