RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 IRX3P78415 501 aaPredicted RBP17.47■□□□□ 0.39
LINC01271-201ENST00000441214 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
LINC01271-201ENST00000441214 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
LINC01271-201ENST00000441214 VGLL3A8MV65 326 aa17.46■□□□□ 0.39
LINC01271-201ENST00000441214 GGNBP2Q9H3C7 697 aa17.46■□□□□ 0.39
LINC01271-201ENST00000441214 PRDM10Q9NQV6 1147 aa17.46■□□□□ 0.39
LINC01271-201ENST00000441214 ADGRB2O60241 1585 aa17.46■□□□□ 0.39
LINC01271-201ENST00000441214 SLC20A2Q08357 652 aa17.46■□□□□ 0.39
LINC01271-201ENST00000441214 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
LINC01271-201ENST00000441214 HDGFL2Q7Z4V5 671 aaPredicted RBP17.46■□□□□ 0.39
LINC01271-201ENST00000441214 TERF2IPQ9NYB0 399 aa17.46■□□□□ 0.39
LINC01271-201ENST00000441214 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
LINC01271-201ENST00000441214 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
LINC01271-201ENST00000441214 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
LINC01271-201ENST00000441214 EXOC6Q8TAG9 804 aa17.45■□□□□ 0.38
LINC01271-201ENST00000441214 GRPEL1Q9HAV7 217 aa17.45■□□□□ 0.38
LINC01271-201ENST00000441214 ZRANB1Q9UGI0 708 aa17.45■□□□□ 0.38
LINC01271-201ENST00000441214 ACEP12821 1306 aa17.45■□□□□ 0.38
LINC01271-201ENST00000441214 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
LINC01271-201ENST00000441214 FBLN1P23142 703 aa17.44■□□□□ 0.38
LINC01271-201ENST00000441214 ADGRL3Q9HAR2 1447 aa17.44■□□□□ 0.38
LINC01271-201ENST00000441214 XPCQ01831 940 aaPredicted RBP17.43■□□□□ 0.38
LINC01271-201ENST00000441214 ESCO1Q5FWF5 840 aa17.43■□□□□ 0.38
LINC01271-201ENST00000441214 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
LINC01271-201ENST00000441214 DNTTIP2Q5QJE6 756 aaKnown RBP17.42■□□□□ 0.38
LINC01271-201ENST00000441214 NGDNQ8NEJ9 315 aaKnown RBP17.42■□□□□ 0.38
LINC01271-201ENST00000441214 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
LINC01271-201ENST00000441214 BECN1Q14457 450 aa17.41■□□□□ 0.38
LINC01271-201ENST00000441214 ZSCAN30Q86W11 494 aa17.41■□□□□ 0.38
LINC01271-201ENST00000441214 NME9Q86XW9 330 aa17.41■□□□□ 0.38
LINC01271-201ENST00000441214 CGNL1Q0VF96 1302 aa17.41■□□□□ 0.38
LINC01271-201ENST00000441214 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
LINC01271-201ENST00000441214 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
LINC01271-201ENST00000441214 MORC1Q86VD1 984 aa17.4■□□□□ 0.38
LINC01271-201ENST00000441214 SOX12O15370 315 aa17.4■□□□□ 0.38
LINC01271-201ENST00000441214 RALBP1Q15311 655 aa17.4■□□□□ 0.38
LINC01271-201ENST00000441214 DDX17Q92841 729 aaKnown RBP17.4■□□□□ 0.38
LINC01271-201ENST00000441214 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.38
LINC01271-201ENST00000441214 FYB1O15117 783 aa17.39■□□□□ 0.37
LINC01271-201ENST00000441214 NUTM2GQ5VZR2 741 aa17.39■□□□□ 0.37
LINC01271-201ENST00000441214 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
LINC01271-201ENST00000441214 MMP14P50281 582 aa17.38■□□□□ 0.37
LINC01271-201ENST00000441214 C19orf44Q9H6X5 657 aa17.38■□□□□ 0.37
LINC01271-201ENST00000441214 ITSN1Q15811 1721 aa17.38■□□□□ 0.37
LINC01271-201ENST00000441214 CDC42BPGQ6DT37 1551 aa17.38■□□□□ 0.37
LINC01271-201ENST00000441214 XIRP1Q702N8 1843 aaKnown RBP17.38■□□□□ 0.37
LINC01271-201ENST00000441214 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
LINC01271-201ENST00000441214 ATF3P18847 181 aa17.37■□□□□ 0.37
LINC01271-201ENST00000441214 PPP2R1AP30153 589 aa17.37■□□□□ 0.37
LINC01271-201ENST00000441214 FOXO3O43524 673 aa17.37■□□□□ 0.37
LINC01271-201ENST00000441214 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
LINC01271-201ENST00000441214 LRRC7Q96NW7 1537 aa17.36■□□□□ 0.37
LINC01271-201ENST00000441214 UQCRHLA0A096LP55 91 aa17.36■□□□□ 0.37
LINC01271-201ENST00000441214 UQCRHP07919 91 aa17.36■□□□□ 0.37
LINC01271-201ENST00000441214 PHF8Q9UPP1 1060 aa17.36■□□□□ 0.37
LINC01271-201ENST00000441214 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
LINC01271-201ENST00000441214 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
LINC01271-201ENST00000441214 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
LINC01271-201ENST00000441214 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
LINC01271-201ENST00000441214 CLGNO14967 610 aa17.35■□□□□ 0.37
LINC01271-201ENST00000441214 HSP90B1P14625 803 aaKnown RBP17.35■□□□□ 0.37
LINC01271-201ENST00000441214 MSNP26038 577 aaKnown RBP17.35■□□□□ 0.37
LINC01271-201ENST00000441214 CCDC173Q0VFZ6 552 aa17.34■□□□□ 0.37
LINC01271-201ENST00000441214 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
LINC01271-201ENST00000441214 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
LINC01271-201ENST00000441214 NLRP13Q86W25 1043 aa17.33■□□□□ 0.37
LINC01271-201ENST00000441214 MSH6P52701 1360 aa17.33■□□□□ 0.37
LINC01271-201ENST00000441214 MCM4P33991 863 aa17.33■□□□□ 0.36
LINC01271-201ENST00000441214 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.36
LINC01271-201ENST00000441214 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
LINC01271-201ENST00000441214 USP6P35125 1406 aa17.33■□□□□ 0.36
LINC01271-201ENST00000441214 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
LINC01271-201ENST00000441214 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
LINC01271-201ENST00000441214 HS1BP3Q53T59 392 aa17.32■□□□□ 0.36
LINC01271-201ENST00000441214 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
LINC01271-201ENST00000441214 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
LINC01271-201ENST00000441214 ANKARQ7Z5J8 1434 aa17.31■□□□□ 0.36
LINC01271-201ENST00000441214 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
LINC01271-201ENST00000441214 PSME1Q06323 249 aa17.31■□□□□ 0.36
LINC01271-201ENST00000441214 CSPP1Q1MSJ5 1256 aa17.31■□□□□ 0.36
LINC01271-201ENST00000441214 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
LINC01271-201ENST00000441214 C1orf167Q5SNV9 1468 aa17.3■□□□□ 0.36
LINC01271-201ENST00000441214 TRAK2O60296 914 aa17.3■□□□□ 0.36
LINC01271-201ENST00000441214 ZNF500O60304 480 aaPredicted RBP17.3■□□□□ 0.36
LINC01271-201ENST00000441214 NPC1L1Q9UHC9 1359 aa17.3■□□□□ 0.36
LINC01271-201ENST00000441214 MST1RQ04912 1400 aa17.29■□□□□ 0.36
LINC01271-201ENST00000441214 MTHFSP49914 203 aa17.29■□□□□ 0.36
LINC01271-201ENST00000441214 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
LINC01271-201ENST00000441214 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
LINC01271-201ENST00000441214 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
LINC01271-201ENST00000441214 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
LINC01271-201ENST00000441214 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.36
LINC01271-201ENST00000441214 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.36
LINC01271-201ENST00000441214 COG3Q96JB2 828 aa17.27■□□□□ 0.36
LINC01271-201ENST00000441214 NRKQ7Z2Y5 1582 aa17.27■□□□□ 0.36
LINC01271-201ENST00000441214 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.35
LINC01271-201ENST00000441214 ABTB2Q8N961 1025 aa17.27■□□□□ 0.35
LINC01271-201ENST00000441214 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.35
LINC01271-201ENST00000441214 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
LINC01271-201ENST00000441214 NLRP6P59044 892 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms