RNA–Protein interactions for RNA: ENST00000440765.2

SIL1-203, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-203ENST00000440765 CRB1P82279 1406 aa11.29□□□□□ -0.6
SIL1-203ENST00000440765 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
SIL1-203ENST00000440765 C14orf93Q9H972 538 aaKnown RBP11.29□□□□□ -0.6
SIL1-203ENST00000440765 COL5A2P05997 1499 aaPredicted RBP11.29□□□□□ -0.6
SIL1-203ENST00000440765 WNK3Q9BYP7 1800 aa11.28□□□□□ -0.6
SIL1-203ENST00000440765 SPATA31E1Q6ZUB1 1445 aa11.28□□□□□ -0.6
SIL1-203ENST00000440765 GRIN3BO60391 1043 aa11.28□□□□□ -0.6
SIL1-203ENST00000440765 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
SIL1-203ENST00000440765 POLD1P28340 1107 aa11.28□□□□□ -0.6
SIL1-203ENST00000440765 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
SIL1-203ENST00000440765 WASLO00401 505 aaPredicted RBP11.27□□□□□ -0.61
SIL1-203ENST00000440765 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
SIL1-203ENST00000440765 TOM1L2Q6ZVM7 507 aa11.26□□□□□ -0.61
SIL1-203ENST00000440765 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
SIL1-203ENST00000440765 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
SIL1-203ENST00000440765 CPDO75976 1380 aa11.26□□□□□ -0.61
SIL1-203ENST00000440765 KAT6BQ8WYB5 2073 aa11.26□□□□□ -0.61
SIL1-203ENST00000440765 PAPPAQ13219 1627 aa11.24□□□□□ -0.61
SIL1-203ENST00000440765 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
SIL1-203ENST00000440765 TNS4Q8IZW8 715 aa11.24□□□□□ -0.61
SIL1-203ENST00000440765 APLP1P51693 650 aa11.23□□□□□ -0.61
SIL1-203ENST00000440765 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
SIL1-203ENST00000440765 ACSBG1Q96GR2 724 aa11.23□□□□□ -0.61
SIL1-203ENST00000440765 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
SIL1-203ENST00000440765 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
SIL1-203ENST00000440765 BTAF1O14981 1849 aa11.21□□□□□ -0.61
SIL1-203ENST00000440765 BCL9O00512 1426 aa11.21□□□□□ -0.61
SIL1-203ENST00000440765 USP19O94966 1318 aa11.21□□□□□ -0.61
SIL1-203ENST00000440765 GCP02774 474 aa11.21□□□□□ -0.61
SIL1-203ENST00000440765 PRELPP51888 382 aa11.21□□□□□ -0.61
SIL1-203ENST00000440765 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
SIL1-203ENST00000440765 COL24A1Q17RW2 1714 aa11.21□□□□□ -0.62
SIL1-203ENST00000440765 ACEP12821 1306 aa11.2□□□□□ -0.62
SIL1-203ENST00000440765 EXOC5O00471 708 aa11.2□□□□□ -0.62
SIL1-203ENST00000440765 NLRP13Q86W25 1043 aa11.2□□□□□ -0.62
SIL1-203ENST00000440765 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
SIL1-203ENST00000440765 CDCA7Q9BWT1 371 aaPredicted RBP11.2□□□□□ -0.62
SIL1-203ENST00000440765 ADCY9O60503 1353 aa11.19□□□□□ -0.62
SIL1-203ENST00000440765 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
SIL1-203ENST00000440765 QSER1Q2KHR3 1735 aa11.19□□□□□ -0.62
SIL1-203ENST00000440765 DNAJC5GQ8N7S2 189 aa11.19□□□□□ -0.62
SIL1-203ENST00000440765 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
SIL1-203ENST00000440765 BRD4O60885 1362 aaPredicted RBP11.18□□□□□ -0.62
SIL1-203ENST00000440765 PNPLA7Q6ZV29 1317 aa11.18□□□□□ -0.62
SIL1-203ENST00000440765 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
SIL1-203ENST00000440765 LRRC4BQ9NT99 713 aa11.18□□□□□ -0.62
SIL1-203ENST00000440765 ADGRB1O14514 1584 aa11.18□□□□□ -0.62
SIL1-203ENST00000440765 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
SIL1-203ENST00000440765 WDR17Q8IZU2 1322 aa11.17□□□□□ -0.62
SIL1-203ENST00000440765 KIF3CO14782 793 aa11.17□□□□□ -0.62
SIL1-203ENST00000440765 MSH5O43196 834 aa11.17□□□□□ -0.62
SIL1-203ENST00000440765 TFCP2L1Q9NZI6 479 aa11.17□□□□□ -0.62
SIL1-203ENST00000440765 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
SIL1-203ENST00000440765 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
SIL1-203ENST00000440765 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
SIL1-203ENST00000440765 WWC3Q9ULE0 1092 aa11.16□□□□□ -0.62
SIL1-203ENST00000440765 USP6P35125 1406 aa11.16□□□□□ -0.62
SIL1-203ENST00000440765 COL18A1P39060 1754 aa11.16□□□□□ -0.62
SIL1-203ENST00000440765 SLC34A2O95436 690 aa11.15□□□□□ -0.62
SIL1-203ENST00000440765 HTRA3P83110 453 aa11.15□□□□□ -0.62
SIL1-203ENST00000440765 AXIN2Q9Y2T1 843 aa11.15□□□□□ -0.62
SIL1-203ENST00000440765 TNS2Q63HR2 1409 aa11.15□□□□□ -0.62
SIL1-203ENST00000440765 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.63
SIL1-203ENST00000440765 KCNQ4P56696 695 aa11.14□□□□□ -0.63
SIL1-203ENST00000440765 MSL1Q68DK7 614 aa11.14□□□□□ -0.63
SIL1-203ENST00000440765 CCDC61Q9Y6R9 512 aa11.14□□□□□ -0.63
SIL1-203ENST00000440765 SOX12O15370 315 aa11.13□□□□□ -0.63
SIL1-203ENST00000440765 NLRP6P59044 892 aa11.13□□□□□ -0.63
SIL1-203ENST00000440765 KLRG1Q96E93 195 aa11.13□□□□□ -0.63
SIL1-203ENST00000440765 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
SIL1-203ENST00000440765 TOMM70O94826 608 aa11.12□□□□□ -0.63
SIL1-203ENST00000440765 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
SIL1-203ENST00000440765 SLIT3O75094 1523 aa11.11□□□□□ -0.63
SIL1-203ENST00000440765 ABCC6O95255 1503 aa11.11□□□□□ -0.63
SIL1-203ENST00000440765 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
SIL1-203ENST00000440765 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
SIL1-203ENST00000440765 CPSF1Q10570 1443 aaKnown RBP11.1□□□□□ -0.63
SIL1-203ENST00000440765 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
SIL1-203ENST00000440765 TRPM1Q7Z4N2 1603 aa11.1□□□□□ -0.63
SIL1-203ENST00000440765 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
SIL1-203ENST00000440765 CCDC7Q96M83 1385 aa11.09□□□□□ -0.63
SIL1-203ENST00000440765 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
SIL1-203ENST00000440765 CD2APQ9Y5K6 639 aa11.09□□□□□ -0.63
SIL1-203ENST00000440765 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
SIL1-203ENST00000440765 SYTL4Q96C24 671 aaPredicted RBP11.08□□□□□ -0.64
SIL1-203ENST00000440765 IGSF1Q8N6C5 1336 aa11.08□□□□□ -0.64
SIL1-203ENST00000440765 PCNTO95613 3336 aa11.07□□□□□ -0.64
SIL1-203ENST00000440765 SRPK2P78362 688 aaKnown RBP11.07□□□□□ -0.64
SIL1-203ENST00000440765 COL23A1Q86Y22 540 aaPredicted RBP11.07□□□□□ -0.64
SIL1-203ENST00000440765 NMRK2Q9NPI5 230 aa11.07□□□□□ -0.64
SIL1-203ENST00000440765 C16orf71Q8IYS4 520 aaPredicted RBP11.06□□□□□ -0.64
SIL1-203ENST00000440765 NLRP2Q9NX02 1062 aa11.06□□□□□ -0.64
SIL1-203ENST00000440765 LY75O60449 1722 aa11.05□□□□□ -0.64
SIL1-203ENST00000440765 IL2RBP14784 551 aa11.05□□□□□ -0.64
SIL1-203ENST00000440765 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
SIL1-203ENST00000440765 HSPA1AP0DMV8 641 aaKnown RBP11.04□□□□□ -0.64
SIL1-203ENST00000440765 HSPA1BP0DMV9 641 aaKnown RBP11.04□□□□□ -0.64
SIL1-203ENST00000440765 DDX54Q8TDD1 881 aaKnown RBP11.04□□□□□ -0.64
SIL1-203ENST00000440765 DCAF11Q8TEB1 546 aa11.04□□□□□ -0.64
SIL1-203ENST00000440765 CABP2Q9NPB3 220 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms