RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.59□□□□□ -1.35
LINC00415-201ENST00000439079 KDM4AO75164 1064 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 ATG7O95352 703 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 ZNF16P17020 682 aaPredicted RBP6.59□□□□□ -1.35
LINC00415-201ENST00000439079 NDUFV2P19404 249 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 USP46P62068 366 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 NOL8Q76FK4 1167 aaKnown RBP6.59□□□□□ -1.35
LINC00415-201ENST00000439079 ZNF592Q92610 1267 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 ZBED2Q9BTP6 218 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 GDPD2Q9HCC8 539 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 KIAA1468Q9P260 1216 aa6.59□□□□□ -1.35
LINC00415-201ENST00000439079 GCGRP47871 477 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 CEBPAP49715 358 aaPredicted RBP6.58□□□□□ -1.36
LINC00415-201ENST00000439079 QPCTQ16769 361 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 CSPP1Q1MSJ5 1256 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 WASHC4Q2M389 1173 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 ZNF326Q5BKZ1 582 aaKnown RBP6.58□□□□□ -1.36
LINC00415-201ENST00000439079 CFAP70Q5T0N1 1121 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 PRPF38BQ5VTL8 546 aaKnown RBP6.58□□□□□ -1.36
LINC00415-201ENST00000439079 BCL2L13Q9BXK5 485 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 FANCAO15360 1455 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 IQSEC2Q5JU85 1478 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 PTPRTO14522 1441 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 HECW1Q76N89 1606 aa6.58□□□□□ -1.36
LINC00415-201ENST00000439079 MED1Q15648 1581 aaPredicted RBP6.57□□□□□ -1.36
LINC00415-201ENST00000439079 ZFYVE16Q7Z3T8 1539 aa6.57□□□□□ -1.36
LINC00415-201ENST00000439079 ABL2P42684 1182 aa6.57□□□□□ -1.36
LINC00415-201ENST00000439079 MTMR14Q8NCE2 650 aa6.57□□□□□ -1.36
LINC00415-201ENST00000439079 RABGEF1Q9UJ41 708 aa6.57□□□□□ -1.36
LINC00415-201ENST00000439079 DENND4BO75064 1496 aaPredicted RBP6.57□□□□□ -1.36
LINC00415-201ENST00000439079 C3P01024 1663 aa6.57□□□□□ -1.36
LINC00415-201ENST00000439079 GOLGA3Q08378 1498 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 NUTM2BA6NNL0 878 aaPredicted RBP6.56□□□□□ -1.36
LINC00415-201ENST00000439079 NUTM2EB1AL46 878 aaPredicted RBP6.56□□□□□ -1.36
LINC00415-201ENST00000439079 ARHGAP33O14559 1287 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 AP1G2O75843 785 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 HDGFP51858 240 aaKnown RBP6.56□□□□□ -1.36
LINC00415-201ENST00000439079 MLECQ14165 292 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 NUTM2DQ5VT03 806 aaPredicted RBP6.56□□□□□ -1.36
LINC00415-201ENST00000439079 DNAJC14Q6Y2X3 702 aaPredicted RBP6.56□□□□□ -1.36
LINC00415-201ENST00000439079 NUTM2AQ8IVF1 878 aaPredicted RBP6.56□□□□□ -1.36
LINC00415-201ENST00000439079 SLC4A5Q9BY07 1137 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 PPP1R12CQ9BZL4 782 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 POGZQ7Z3K3 1410 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 AKNAQ7Z591 1439 aa6.56□□□□□ -1.36
LINC00415-201ENST00000439079 EFCAB5A4FU69 1503 aa6.55□□□□□ -1.36
LINC00415-201ENST00000439079 HOXA2O43364 376 aa6.55□□□□□ -1.36
LINC00415-201ENST00000439079 RFX1P22670 979 aa6.55□□□□□ -1.36
LINC00415-201ENST00000439079 SLC4A3P48751 1232 aa6.55□□□□□ -1.36
LINC00415-201ENST00000439079 PSEN2P49810 448 aa6.55□□□□□ -1.36
LINC00415-201ENST00000439079 RTL5Q5HYW3 569 aaPredicted RBP6.55□□□□□ -1.36
LINC00415-201ENST00000439079 HDGFL1Q5TGJ6 251 aa6.55□□□□□ -1.36
LINC00415-201ENST00000439079 NOP9Q86U38 636 aaKnown RBP6.55□□□□□ -1.36
LINC00415-201ENST00000439079 ZBTB3Q9H5J0 574 aa6.55□□□□□ -1.36
LINC00415-201ENST00000439079 RAPGEF6Q8TEU7 1601 aa6.54□□□□□ -1.36
LINC00415-201ENST00000439079 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
LINC00415-201ENST00000439079 SLC10A3P09131 477 aa6.54□□□□□ -1.36
LINC00415-201ENST00000439079 FDX1P10109 184 aa6.54□□□□□ -1.36
LINC00415-201ENST00000439079 SWT1Q5T5J6 900 aaKnown RBP6.54□□□□□ -1.36
LINC00415-201ENST00000439079 MYH16Q9H6N6 1097 aa6.54□□□□□ -1.36
LINC00415-201ENST00000439079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.54□□□□□ -1.36
LINC00415-201ENST00000439079 CFAP74Q9C0B2 1584 aa6.53□□□□□ -1.36
LINC00415-201ENST00000439079 NAALADL2Q58DX5 795 aa6.53□□□□□ -1.36
LINC00415-201ENST00000439079 CABLES1Q8TDN4 633 aa6.53□□□□□ -1.36
LINC00415-201ENST00000439079 MAGI2Q86UL8 1455 aa6.53□□□□□ -1.36
LINC00415-201ENST00000439079 SAMD9Q5K651 1589 aa6.52□□□□□ -1.36
LINC00415-201ENST00000439079 ERBB3P21860 1342 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 NCOA1Q15788 1441 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 UHRF1BP1Q6BDS2 1440 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 USP17L8P0C7I0 530 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 PBX2P40425 430 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 FAM98CQ17RN3 349 aaKnown RBP6.52□□□□□ -1.37
LINC00415-201ENST00000439079 GRIPAP1Q4V328 841 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 VARS2Q5ST30 1063 aaKnown RBP6.52□□□□□ -1.37
LINC00415-201ENST00000439079 CCDC181Q5TID7 509 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 OTUD5Q96G74 571 aa6.52□□□□□ -1.37
LINC00415-201ENST00000439079 METTL14Q9HCE5 456 aaKnown RBP6.52□□□□□ -1.37
LINC00415-201ENST00000439079 SEPT9Q9UHD8 586 aaPredicted RBP6.52□□□□□ -1.37
LINC00415-201ENST00000439079 NUP153P49790 1475 aaKnown RBP6.52□□□□□ -1.37
LINC00415-201ENST00000439079 HMGB1P1B2RPK0 211 aaPredicted RBP6.51□□□□□ -1.37
LINC00415-201ENST00000439079 MARCH6O60337 910 aa6.51□□□□□ -1.37
LINC00415-201ENST00000439079 ARID4AP29374 1257 aaPredicted RBP6.51□□□□□ -1.37
LINC00415-201ENST00000439079 LAPTM4BQ86VI4 370 aa6.51□□□□□ -1.37
LINC00415-201ENST00000439079 SLF2Q8IX21 1173 aa6.51□□□□□ -1.37
LINC00415-201ENST00000439079 GIPC2Q8TF65 315 aa6.51□□□□□ -1.37
LINC00415-201ENST00000439079 PCDHGC3Q9UN70 934 aa6.51□□□□□ -1.37
LINC00415-201ENST00000439079 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
LINC00415-201ENST00000439079 RIPOR2Q9Y4F9 1068 aa6.51□□□□□ -1.37
LINC00415-201ENST00000439079 ATP10AO60312 1499 aa6.51□□□□□ -1.37
LINC00415-201ENST00000439079 ALKQ9UM73 1620 aa6.5□□□□□ -1.37
LINC00415-201ENST00000439079 SOX11P35716 441 aa6.5□□□□□ -1.37
LINC00415-201ENST00000439079 MARSP56192 900 aaKnown RBP6.5□□□□□ -1.37
LINC00415-201ENST00000439079 MTMR2Q13614 643 aa6.5□□□□□ -1.37
LINC00415-201ENST00000439079 DMRTA1Q5VZB9 504 aa6.5□□□□□ -1.37
LINC00415-201ENST00000439079 POTEEQ6S8J3 1075 aa6.5□□□□□ -1.37
LINC00415-201ENST00000439079 PPP1R1BQ9UD71 204 aaPredicted RBP6.5□□□□□ -1.37
LINC00415-201ENST00000439079 TBC1D2BQ9UPU7 963 aa6.5□□□□□ -1.37
LINC00415-201ENST00000439079 VPS9D1Q9Y2B5 631 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms