RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 PAK3O75914 559 aaPredicted RBP19.97■□□□□ 0.79
SGCE-205ENST00000437425 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
SGCE-205ENST00000437425 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
SGCE-205ENST00000437425 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
SGCE-205ENST00000437425 AMPHP49418 695 aa19.97■□□□□ 0.79
SGCE-205ENST00000437425 CADPS2Q86UW7 1296 aa19.97■□□□□ 0.79
SGCE-205ENST00000437425 TRIM35Q9UPQ4 493 aa19.97■□□□□ 0.79
SGCE-205ENST00000437425 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
SGCE-205ENST00000437425 PEAK1Q9H792 1746 aa19.95■□□□□ 0.78
SGCE-205ENST00000437425 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
SGCE-205ENST00000437425 MST1RQ04912 1400 aa19.94■□□□□ 0.78
SGCE-205ENST00000437425 HMOX1P09601 288 aa19.94■□□□□ 0.78
SGCE-205ENST00000437425 RGPD1P0DJD0 1748 aa19.94■□□□□ 0.78
SGCE-205ENST00000437425 MARF1Q9Y4F3 1742 aaKnown RBP19.94■□□□□ 0.78
SGCE-205ENST00000437425 MSH6P52701 1360 aa19.93■□□□□ 0.78
SGCE-205ENST00000437425 HSP90AB2PQ58FF8 381 aa19.92■□□□□ 0.78
SGCE-205ENST00000437425 CCDC136Q96JN2 1154 aa19.92■□□□□ 0.78
SGCE-205ENST00000437425 STRCP1A6NGW2 1772 aa19.91■□□□□ 0.78
SGCE-205ENST00000437425 STRCQ7RTU9 1775 aa19.91■□□□□ 0.78
SGCE-205ENST00000437425 ORAI2Q96SN7 254 aa19.91■□□□□ 0.78
SGCE-205ENST00000437425 KDRP35968 1356 aa19.9■□□□□ 0.78
SGCE-205ENST00000437425 SULT6B1Q6IMI4 303 aa19.9■□□□□ 0.78
SGCE-205ENST00000437425 PHRF1Q9P1Y6 1649 aaKnown RBP19.9■□□□□ 0.78
SGCE-205ENST00000437425 HOXC9P31274 260 aa19.89■□□□□ 0.77
SGCE-205ENST00000437425 ZNF428Q96B54 188 aa19.89■□□□□ 0.77
SGCE-205ENST00000437425 PHACTR3Q96KR7 559 aa19.89■□□□□ 0.77
SGCE-205ENST00000437425 SOX12O15370 315 aa19.88■□□□□ 0.77
SGCE-205ENST00000437425 FOXO3O43524 673 aa19.88■□□□□ 0.77
SGCE-205ENST00000437425 PDE3AQ14432 1141 aa19.88■□□□□ 0.77
SGCE-205ENST00000437425 KRT28Q7Z3Y7 464 aa19.88■□□□□ 0.77
SGCE-205ENST00000437425 NFAT5O94916 1531 aa19.88■□□□□ 0.77
SGCE-205ENST00000437425 IGSF1Q8N6C5 1336 aa19.88■□□□□ 0.77
SGCE-205ENST00000437425 FANCIQ9NVI1 1328 aa19.88■□□□□ 0.77
SGCE-205ENST00000437425 GNAI1P63096 354 aa19.87■□□□□ 0.77
SGCE-205ENST00000437425 IFT57Q9NWB7 429 aa19.87■□□□□ 0.77
SGCE-205ENST00000437425 SLIT3O75094 1523 aa19.87■□□□□ 0.77
SGCE-205ENST00000437425 TRPM3Q9HCF6 1732 aaPredicted RBP19.87■□□□□ 0.77
SGCE-205ENST00000437425 RARSP54136 660 aaKnown RBP19.86■□□□□ 0.77
SGCE-205ENST00000437425 B4GALNT3Q6L9W6 998 aa19.86■□□□□ 0.77
SGCE-205ENST00000437425 IP6K1Q92551 441 aa19.86■□□□□ 0.77
SGCE-205ENST00000437425 NPHP3Q7Z494 1330 aa19.86■□□□□ 0.77
SGCE-205ENST00000437425 AAMPQ13685 434 aa19.86■□□□□ 0.77
SGCE-205ENST00000437425 EXOC6Q8TAG9 804 aa19.86■□□□□ 0.77
SGCE-205ENST00000437425 USP19O94966 1318 aa19.86■□□□□ 0.77
SGCE-205ENST00000437425 PLIN1O60240 522 aa19.85■□□□□ 0.77
SGCE-205ENST00000437425 MS4A1P11836 297 aa19.85■□□□□ 0.77
SGCE-205ENST00000437425 NUTM2GQ5VZR2 741 aa19.85■□□□□ 0.77
SGCE-205ENST00000437425 ILDR2Q71H61 639 aa19.85■□□□□ 0.77
SGCE-205ENST00000437425 GAS2L2Q8NHY3 880 aa19.83■□□□□ 0.77
SGCE-205ENST00000437425 LTN1O94822 1766 aa19.82■□□□□ 0.76
SGCE-205ENST00000437425 CANXP27824 592 aaKnown RBP19.82■□□□□ 0.76
SGCE-205ENST00000437425 CRBNQ96SW2 442 aa19.82■□□□□ 0.76
SGCE-205ENST00000437425 EYA1Q99502 592 aa19.82■□□□□ 0.76
SGCE-205ENST00000437425 HTATSF1O43719 755 aaKnown RBP19.81■□□□□ 0.76
SGCE-205ENST00000437425 BCAR3O75815 825 aa19.81■□□□□ 0.76
SGCE-205ENST00000437425 GCP02774 474 aa19.81■□□□□ 0.76
SGCE-205ENST00000437425 HAP1P54257 671 aaPredicted RBP19.81■□□□□ 0.76
SGCE-205ENST00000437425 AEBP1Q8IUX7 1158 aa19.81■□□□□ 0.76
SGCE-205ENST00000437425 CFAP44Q96MT7 982 aa19.81■□□□□ 0.76
SGCE-205ENST00000437425 ZNF853P0CG23 659 aa19.81■□□□□ 0.76
SGCE-205ENST00000437425 ALS2Q96Q42 1657 aa19.8■□□□□ 0.76
SGCE-205ENST00000437425 EXOSC9Q06265 439 aaKnown RBP19.8■□□□□ 0.76
SGCE-205ENST00000437425 ALDH1L2Q3SY69 923 aa19.8■□□□□ 0.76
SGCE-205ENST00000437425 DLG5Q8TDM6 1919 aa19.79■□□□□ 0.76
SGCE-205ENST00000437425 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
SGCE-205ENST00000437425 TSR2Q969E8 191 aaKnown RBP19.79■□□□□ 0.76
SGCE-205ENST00000437425 XIRP1Q702N8 1843 aaKnown RBP19.77■□□□□ 0.76
SGCE-205ENST00000437425 BRPF1P55201 1214 aaPredicted RBP19.76■□□□□ 0.75
SGCE-205ENST00000437425 RTF1Q92541 710 aaKnown RBP19.76■□□□□ 0.75
SGCE-205ENST00000437425 KIF16BQ96L93 1317 aa19.76■□□□□ 0.75
SGCE-205ENST00000437425 C20orf194Q5TEA3 1177 aa19.76■□□□□ 0.75
SGCE-205ENST00000437425 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
SGCE-205ENST00000437425 LMOD2Q6P5Q4 547 aa19.76■□□□□ 0.75
SGCE-205ENST00000437425 ABCC6O95255 1503 aa19.75■□□□□ 0.75
SGCE-205ENST00000437425 IPO8O15397 1037 aaKnown RBP19.75■□□□□ 0.75
SGCE-205ENST00000437425 XPCQ01831 940 aaPredicted RBP19.75■□□□□ 0.75
SGCE-205ENST00000437425 ZKSCAN2Q63HK3 967 aa19.75■□□□□ 0.75
SGCE-205ENST00000437425 SMC4Q9NTJ3 1288 aa19.74■□□□□ 0.75
SGCE-205ENST00000437425 ZNF335Q9H4Z2 1342 aaPredicted RBP19.73■□□□□ 0.75
SGCE-205ENST00000437425 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
SGCE-205ENST00000437425 PXDNQ92626 1479 aa19.73■□□□□ 0.75
SGCE-205ENST00000437425 MTHFSDQ2M296 383 aaKnown RBP19.72■□□□□ 0.75
SGCE-205ENST00000437425 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
SGCE-205ENST00000437425 MBIPQ9NS73 344 aa19.72■□□□□ 0.75
SGCE-205ENST00000437425 SOCS7O14512 581 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 BABAM1Q9NWV8 329 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 NCAPD2Q15021 1401 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 SPATA31A3Q5VYP0 1347 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 MED1Q15648 1581 aaPredicted RBP19.71■□□□□ 0.75
SGCE-205ENST00000437425 KIAA0232Q92628 1395 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 PLEKHG2Q9H7P9 1386 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 CHL1O00533 1208 aa19.71■□□□□ 0.75
SGCE-205ENST00000437425 GNAT3A8MTJ3 354 aa19.7■□□□□ 0.74
SGCE-205ENST00000437425 BRINP3Q76B58 766 aa19.7■□□□□ 0.74
SGCE-205ENST00000437425 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
SGCE-205ENST00000437425 LTV1Q96GA3 475 aaPredicted RBP19.7■□□□□ 0.74
SGCE-205ENST00000437425 THUMPD2Q9BTF0 503 aaKnown RBP19.7■□□□□ 0.74
SGCE-205ENST00000437425 CENPQQ7L2Z9 268 aaPredicted RBP19.69■□□□□ 0.74
SGCE-205ENST00000437425 FAM83GA6ND36 823 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms