RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 MCTP1Q6DN14 999 aa16.09■□□□□ 0.17
TOP2B-203ENST00000424225 TSC1Q92574 1164 aa16.09■□□□□ 0.17
TOP2B-203ENST00000424225 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
TOP2B-203ENST00000424225 FRMPD1Q5SYB0 1578 aa16.09■□□□□ 0.17
TOP2B-203ENST00000424225 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
TOP2B-203ENST00000424225 VAMP4O75379 141 aa16.08■□□□□ 0.16
TOP2B-203ENST00000424225 PLEKHM2Q8IWE5 1019 aa16.08■□□□□ 0.16
TOP2B-203ENST00000424225 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
TOP2B-203ENST00000424225 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
TOP2B-203ENST00000424225 ZNF445P59923 1031 aa16.08■□□□□ 0.16
TOP2B-203ENST00000424225 ARID3AQ99856 593 aa16.08■□□□□ 0.16
TOP2B-203ENST00000424225 ABCC11Q96J66 1382 aa16.08■□□□□ 0.16
TOP2B-203ENST00000424225 PIK3R4Q99570 1358 aa16.08■□□□□ 0.16
TOP2B-203ENST00000424225 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
TOP2B-203ENST00000424225 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
TOP2B-203ENST00000424225 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
TOP2B-203ENST00000424225 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
TOP2B-203ENST00000424225 ISY1Q9ULR0 285 aaKnown RBP16.07■□□□□ 0.16
TOP2B-203ENST00000424225 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
TOP2B-203ENST00000424225 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
TOP2B-203ENST00000424225 RICTORQ6R327 1708 aa16.06■□□□□ 0.16
TOP2B-203ENST00000424225 USP26Q9BXU7 913 aa16.06■□□□□ 0.16
TOP2B-203ENST00000424225 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
TOP2B-203ENST00000424225 TPM2P07951 284 aa16.05■□□□□ 0.16
TOP2B-203ENST00000424225 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
TOP2B-203ENST00000424225 TRIM44Q96DX7 344 aaPredicted RBP16.05■□□□□ 0.16
TOP2B-203ENST00000424225 NOL7Q9UMY1 257 aaKnown RBP16.05■□□□□ 0.16
TOP2B-203ENST00000424225 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
TOP2B-203ENST00000424225 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
TOP2B-203ENST00000424225 PTCH1Q13635 1447 aa16.05■□□□□ 0.16
TOP2B-203ENST00000424225 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
TOP2B-203ENST00000424225 RGS12O14924 1447 aa16.04■□□□□ 0.16
TOP2B-203ENST00000424225 CT47B1P0C2W7 299 aaPredicted RBP16.04■□□□□ 0.16
TOP2B-203ENST00000424225 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
TOP2B-203ENST00000424225 MPNDQ8N594 471 aa16.04■□□□□ 0.16
TOP2B-203ENST00000424225 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
TOP2B-203ENST00000424225 C8orf58Q8NAV2 365 aa16.03■□□□□ 0.16
TOP2B-203ENST00000424225 FAM13BQ9NYF5 915 aa16.03■□□□□ 0.16
TOP2B-203ENST00000424225 FANCAO15360 1455 aa16.03■□□□□ 0.16
TOP2B-203ENST00000424225 ABCC4O15439 1325 aa16.03■□□□□ 0.16
TOP2B-203ENST00000424225 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
TOP2B-203ENST00000424225 ZNF500O60304 480 aaPredicted RBP16.03■□□□□ 0.16
TOP2B-203ENST00000424225 ATP10DQ9P241 1426 aa16.03■□□□□ 0.16
TOP2B-203ENST00000424225 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
TOP2B-203ENST00000424225 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.16
TOP2B-203ENST00000424225 FAM83GA6ND36 823 aa16.02■□□□□ 0.16
TOP2B-203ENST00000424225 YEATS2Q9ULM3 1422 aa16.02■□□□□ 0.16
TOP2B-203ENST00000424225 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
TOP2B-203ENST00000424225 TCHHQ07283 1943 aa16.01■□□□□ 0.15
TOP2B-203ENST00000424225 PRPF40AO75400 957 aaKnown RBP16.01■□□□□ 0.15
TOP2B-203ENST00000424225 PIK3C2BO00750 1634 aa16.01■□□□□ 0.15
TOP2B-203ENST00000424225 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
TOP2B-203ENST00000424225 FOXD4L5Q5VV16 416 aaPredicted RBP16.01■□□□□ 0.15
TOP2B-203ENST00000424225 ZNF710Q8N1W2 664 aa16.01■□□□□ 0.15
TOP2B-203ENST00000424225 FOXD4L4Q8WXT5 416 aaPredicted RBP16.01■□□□□ 0.15
TOP2B-203ENST00000424225 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
TOP2B-203ENST00000424225 IL16Q14005 1332 aa16.01■□□□□ 0.15
TOP2B-203ENST00000424225 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
TOP2B-203ENST00000424225 SKOR2Q2VWA4 1001 aaPredicted RBP16.01■□□□□ 0.15
TOP2B-203ENST00000424225 PTPRMP28827 1452 aa16■□□□□ 0.15
TOP2B-203ENST00000424225 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
TOP2B-203ENST00000424225 DTNBO60941 627 aa16■□□□□ 0.15
TOP2B-203ENST00000424225 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
TOP2B-203ENST00000424225 PRDM10Q9NQV6 1147 aa16■□□□□ 0.15
TOP2B-203ENST00000424225 MBIPQ9NS73 344 aa16■□□□□ 0.15
TOP2B-203ENST00000424225 ARHGEF40Q8TER5 1519 aa16■□□□□ 0.15
TOP2B-203ENST00000424225 SYCE3A1L190 88 aa15.99■□□□□ 0.15
TOP2B-203ENST00000424225 HMOX1P09601 288 aa15.99■□□□□ 0.15
TOP2B-203ENST00000424225 GLIPR1L2Q4G1C9 344 aa15.99■□□□□ 0.15
TOP2B-203ENST00000424225 CFAP53Q96M91 514 aa15.99■□□□□ 0.15
TOP2B-203ENST00000424225 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
TOP2B-203ENST00000424225 ABCC3O15438 1527 aa15.99■□□□□ 0.15
TOP2B-203ENST00000424225 ALDH1L2Q3SY69 923 aa15.99■□□□□ 0.15
TOP2B-203ENST00000424225 KIF16BQ96L93 1317 aa15.99■□□□□ 0.15
TOP2B-203ENST00000424225 ZNF853P0CG23 659 aa15.98■□□□□ 0.15
TOP2B-203ENST00000424225 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
TOP2B-203ENST00000424225 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
TOP2B-203ENST00000424225 UQCRHLA0A096LP55 91 aa15.98■□□□□ 0.15
TOP2B-203ENST00000424225 UQCRHP07919 91 aa15.98■□□□□ 0.15
TOP2B-203ENST00000424225 PRKAR2BP31323 418 aa15.98■□□□□ 0.15
TOP2B-203ENST00000424225 IL25Q9H293 177 aa15.98■□□□□ 0.15
TOP2B-203ENST00000424225 KIF20BQ96Q89 1820 aa15.97■□□□□ 0.15
TOP2B-203ENST00000424225 SDSP20132 328 aa15.97■□□□□ 0.15
TOP2B-203ENST00000424225 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
TOP2B-203ENST00000424225 ZNF830Q96NB3 372 aaPredicted RBP15.97■□□□□ 0.15
TOP2B-203ENST00000424225 TTC22Q5TAA0 569 aa15.97■□□□□ 0.15
TOP2B-203ENST00000424225 TSHZ3Q63HK5 1081 aa15.97■□□□□ 0.15
TOP2B-203ENST00000424225 NCLP19338 710 aaKnown RBP15.97■□□□□ 0.15
TOP2B-203ENST00000424225 RNF214Q8ND24 703 aa15.97■□□□□ 0.15
TOP2B-203ENST00000424225 STK26Q9P289 416 aa15.96■□□□□ 0.15
TOP2B-203ENST00000424225 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
TOP2B-203ENST00000424225 PALD1Q9ULE6 856 aa15.96■□□□□ 0.15
TOP2B-203ENST00000424225 NSD2O96028 1365 aa15.95■□□□□ 0.14
TOP2B-203ENST00000424225 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
TOP2B-203ENST00000424225 ZKSCAN5Q9Y2L8 839 aa15.95■□□□□ 0.14
TOP2B-203ENST00000424225 GCC1Q96CN9 775 aa15.95■□□□□ 0.14
TOP2B-203ENST00000424225 CLTCQ00610 1675 aaKnown RBP15.94■□□□□ 0.14
TOP2B-203ENST00000424225 CDC45O75419 566 aa15.94■□□□□ 0.14
TOP2B-203ENST00000424225 AP5Z1O43299 807 aa15.94■□□□□ 0.14
TOP2B-203ENST00000424225 DCTPP1Q9H773 170 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms