RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ARHGEF10O15013 1369 aa21.8■■□□□ 1.08
SSBP3-205ENST00000417664 AMPHP49418 695 aa21.79■■□□□ 1.08
SSBP3-205ENST00000417664 HSP90AB2PQ58FF8 381 aa21.79■■□□□ 1.08
SSBP3-205ENST00000417664 B4GALNT3Q6L9W6 998 aa21.79■■□□□ 1.08
SSBP3-205ENST00000417664 C1orf167Q5SNV9 1468 aa21.79■■□□□ 1.08
SSBP3-205ENST00000417664 RGPD1P0DJD0 1748 aa21.79■■□□□ 1.08
SSBP3-205ENST00000417664 TMEM94Q12767 1356 aa21.79■■□□□ 1.08
SSBP3-205ENST00000417664 HSPA2P54652 639 aa21.79■■□□□ 1.08
SSBP3-205ENST00000417664 RTL1A6NKG5 1358 aa21.78■■□□□ 1.08
SSBP3-205ENST00000417664 PLIN1O60240 522 aa21.78■■□□□ 1.08
SSBP3-205ENST00000417664 ATF3P18847 181 aa21.78■■□□□ 1.08
SSBP3-205ENST00000417664 EXOC6Q8TAG9 804 aa21.78■■□□□ 1.08
SSBP3-205ENST00000417664 PHACTR3Q96KR7 559 aa21.78■■□□□ 1.08
SSBP3-205ENST00000417664 KCNH5Q8NCM2 988 aa21.77■■□□□ 1.08
SSBP3-205ENST00000417664 STRCP1A6NGW2 1772 aa21.76■■□□□ 1.07
SSBP3-205ENST00000417664 SOX12O15370 315 aa21.75■■□□□ 1.07
SSBP3-205ENST00000417664 ORAI2Q96SN7 254 aa21.75■■□□□ 1.07
SSBP3-205ENST00000417664 FANCIQ9NVI1 1328 aa21.75■■□□□ 1.07
SSBP3-205ENST00000417664 SULT6B1Q6IMI4 303 aa21.75■■□□□ 1.07
SSBP3-205ENST00000417664 CADPS2Q86UW7 1296 aa21.75■■□□□ 1.07
SSBP3-205ENST00000417664 RARSP54136 660 aaKnown RBP21.74■■□□□ 1.07
SSBP3-205ENST00000417664 MST1RQ04912 1400 aa21.74■■□□□ 1.07
SSBP3-205ENST00000417664 KDRP35968 1356 aa21.73■■□□□ 1.07
SSBP3-205ENST00000417664 PDE3AQ14432 1141 aa21.73■■□□□ 1.07
SSBP3-205ENST00000417664 FOXO3O43524 673 aa21.72■■□□□ 1.07
SSBP3-205ENST00000417664 HOXC9P31274 260 aa21.72■■□□□ 1.07
SSBP3-205ENST00000417664 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
SSBP3-205ENST00000417664 IGSF1Q8N6C5 1336 aa21.72■■□□□ 1.07
SSBP3-205ENST00000417664 BCAR3O75815 825 aa21.72■■□□□ 1.07
SSBP3-205ENST00000417664 NUTM2GQ5VZR2 741 aa21.72■■□□□ 1.07
SSBP3-205ENST00000417664 MSH6P52701 1360 aa21.71■■□□□ 1.07
SSBP3-205ENST00000417664 CRBNQ96SW2 442 aa21.71■■□□□ 1.07
SSBP3-205ENST00000417664 NFAT5O94916 1531 aa21.71■■□□□ 1.07
SSBP3-205ENST00000417664 ZNF428Q96B54 188 aa21.7■■□□□ 1.06
SSBP3-205ENST00000417664 IFT57Q9NWB7 429 aa21.7■■□□□ 1.06
SSBP3-205ENST00000417664 PHRF1Q9P1Y6 1649 aaKnown RBP21.7■■□□□ 1.06
SSBP3-205ENST00000417664 TRPM3Q9HCF6 1732 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-205ENST00000417664 GNAI1P63096 354 aa21.69■■□□□ 1.06
SSBP3-205ENST00000417664 KRT28Q7Z3Y7 464 aa21.69■■□□□ 1.06
SSBP3-205ENST00000417664 AEBP1Q8IUX7 1158 aa21.69■■□□□ 1.06
SSBP3-205ENST00000417664 SLIT3O75094 1523 aa21.68■■□□□ 1.06
SSBP3-205ENST00000417664 C20orf194Q5TEA3 1177 aa21.68■■□□□ 1.06
SSBP3-205ENST00000417664 IP6K1Q92551 441 aa21.68■■□□□ 1.06
SSBP3-205ENST00000417664 TSR2Q969E8 191 aaKnown RBP21.68■■□□□ 1.06
SSBP3-205ENST00000417664 DLG5Q8TDM6 1919 aa21.67■■□□□ 1.06
SSBP3-205ENST00000417664 EXOSC9Q06265 439 aaKnown RBP21.67■■□□□ 1.06
SSBP3-205ENST00000417664 EYA1Q99502 592 aa21.67■■□□□ 1.06
SSBP3-205ENST00000417664 USP19O94966 1318 aa21.67■■□□□ 1.06
SSBP3-205ENST00000417664 ZNF853P0CG23 659 aa21.66■■□□□ 1.06
SSBP3-205ENST00000417664 LTN1O94822 1766 aa21.65■■□□□ 1.06
SSBP3-205ENST00000417664 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
SSBP3-205ENST00000417664 AAMPQ13685 434 aa21.65■■□□□ 1.06
SSBP3-205ENST00000417664 CFAP44Q96MT7 982 aa21.65■■□□□ 1.06
SSBP3-205ENST00000417664 NPHP3Q7Z494 1330 aa21.64■■□□□ 1.06
SSBP3-205ENST00000417664 GCP02774 474 aa21.64■■□□□ 1.05
SSBP3-205ENST00000417664 MS4A1P11836 297 aa21.64■■□□□ 1.05
SSBP3-205ENST00000417664 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
SSBP3-205ENST00000417664 ALDH1L2Q3SY69 923 aa21.63■■□□□ 1.05
SSBP3-205ENST00000417664 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
SSBP3-205ENST00000417664 ALS2Q96Q42 1657 aa21.61■■□□□ 1.05
SSBP3-205ENST00000417664 HTATSF1O43719 755 aaKnown RBP21.61■■□□□ 1.05
SSBP3-205ENST00000417664 ARHGEF25Q86VW2 580 aa21.61■■□□□ 1.05
SSBP3-205ENST00000417664 XIRP1Q702N8 1843 aaKnown RBP21.6■■□□□ 1.05
SSBP3-205ENST00000417664 BRPF1P55201 1214 aaPredicted RBP21.6■■□□□ 1.05
SSBP3-205ENST00000417664 XPCQ01831 940 aaPredicted RBP21.6■■□□□ 1.05
SSBP3-205ENST00000417664 FRAT1Q92837 279 aaPredicted RBP21.59■■□□□ 1.05
SSBP3-205ENST00000417664 HAP1P54257 671 aaPredicted RBP21.58■■□□□ 1.05
SSBP3-205ENST00000417664 ZKSCAN2Q63HK3 967 aa21.58■■□□□ 1.05
SSBP3-205ENST00000417664 THUMPD2Q9BTF0 503 aaKnown RBP21.58■■□□□ 1.05
SSBP3-205ENST00000417664 SMC4Q9NTJ3 1288 aa21.58■■□□□ 1.05
SSBP3-205ENST00000417664 LAS1LQ9Y4W2 734 aaKnown RBP21.58■■□□□ 1.05
SSBP3-205ENST00000417664 LMOD2Q6P5Q4 547 aa21.57■■□□□ 1.04
SSBP3-205ENST00000417664 MBIPQ9NS73 344 aa21.57■■□□□ 1.04
SSBP3-205ENST00000417664 KIF16BQ96L93 1317 aa21.57■■□□□ 1.04
SSBP3-205ENST00000417664 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
SSBP3-205ENST00000417664 RTF1Q92541 710 aaKnown RBP21.56■■□□□ 1.04
SSBP3-205ENST00000417664 FAM83GA6ND36 823 aa21.56■■□□□ 1.04
SSBP3-205ENST00000417664 IPO8O15397 1037 aaKnown RBP21.56■■□□□ 1.04
SSBP3-205ENST00000417664 SSH1Q8WYL5 1049 aa21.56■■□□□ 1.04
SSBP3-205ENST00000417664 TNS3Q68CZ2 1445 aa21.54■■□□□ 1.04
SSBP3-205ENST00000417664 ZNF335Q9H4Z2 1342 aaPredicted RBP21.54■■□□□ 1.04
SSBP3-205ENST00000417664 CHL1O00533 1208 aa21.54■■□□□ 1.04
SSBP3-205ENST00000417664 BCL2L13Q9BXK5 485 aa21.54■■□□□ 1.04
SSBP3-205ENST00000417664 PXDNQ92626 1479 aa21.54■■□□□ 1.04
SSBP3-205ENST00000417664 LTV1Q96GA3 475 aaPredicted RBP21.53■■□□□ 1.04
SSBP3-205ENST00000417664 VAMP4O75379 141 aa21.53■■□□□ 1.04
SSBP3-205ENST00000417664 DCTN1Q14203 1278 aa21.53■■□□□ 1.04
SSBP3-205ENST00000417664 CENPQQ7L2Z9 268 aaPredicted RBP21.53■■□□□ 1.04
SSBP3-205ENST00000417664 NCAPD2Q15021 1401 aa21.52■■□□□ 1.04
SSBP3-205ENST00000417664 DZIP1LQ8IYY4 767 aaKnown RBP21.52■■□□□ 1.04
SSBP3-205ENST00000417664 PANK1Q8TE04 598 aa21.52■■□□□ 1.04
SSBP3-205ENST00000417664 CRB1P82279 1406 aa21.51■■□□□ 1.03
SSBP3-205ENST00000417664 KIAA0232Q92628 1395 aa21.51■■□□□ 1.03
SSBP3-205ENST00000417664 ATF7IPQ6VMQ6 1270 aa21.51■■□□□ 1.03
SSBP3-205ENST00000417664 MED1Q15648 1581 aaPredicted RBP21.51■■□□□ 1.03
SSBP3-205ENST00000417664 SPATA31A3Q5VYP0 1347 aa21.51■■□□□ 1.03
SSBP3-205ENST00000417664 KDM2BQ8NHM5 1336 aa21.51■■□□□ 1.03
SSBP3-205ENST00000417664 ABCC6O95255 1503 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 GNAT3A8MTJ3 354 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms