RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 KCTD15Q96SI1 283 aaPredicted RBP7.96□□□□□ -1.14
CLHC1-205ENST00000411884 TNFRSF10AO00220 468 aa7.95□□□□□ -1.14
CLHC1-205ENST00000411884 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
CLHC1-205ENST00000411884 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
CLHC1-205ENST00000411884 PRR20EP86478 221 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 PRR20CP86479 221 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 PRR20DP86480 221 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 PRR20BP86481 221 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 PRR20AP86496 221 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 SNIP1Q8TAD8 396 aaKnown RBP7.94□□□□□ -1.14
CLHC1-205ENST00000411884 TOR4AQ9NXH8 423 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 SERPINA10Q9UK55 444 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 CHIC2Q9UKJ5 165 aa7.94□□□□□ -1.14
CLHC1-205ENST00000411884 ADH1CP00326 375 aa7.93□□□□□ -1.14
CLHC1-205ENST00000411884 TSGA10IPQ3SY00 556 aa7.93□□□□□ -1.14
CLHC1-205ENST00000411884 SLFNL1Q499Z3 407 aa7.93□□□□□ -1.14
CLHC1-205ENST00000411884 INTS6LQ5JSJ4 861 aaKnown RBP7.93□□□□□ -1.14
CLHC1-205ENST00000411884 TBC1D9Q6ZT07 1266 aa7.93□□□□□ -1.14
CLHC1-205ENST00000411884 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
CLHC1-205ENST00000411884 PPP1R12CQ9BZL4 782 aa7.93□□□□□ -1.14
CLHC1-205ENST00000411884 PALM3A6NDB9 673 aaPredicted RBP7.92□□□□□ -1.14
CLHC1-205ENST00000411884 J3QL48 77 aa7.92□□□□□ -1.14
CLHC1-205ENST00000411884 ALDH1A1P00352 501 aa7.92□□□□□ -1.14
CLHC1-205ENST00000411884 RNF135Q8IUD6 432 aa7.92□□□□□ -1.14
CLHC1-205ENST00000411884 SEPT12Q8IYM1 358 aa7.92□□□□□ -1.14
CLHC1-205ENST00000411884 NFATC2IPQ8NCF5 419 aa7.92□□□□□ -1.14
CLHC1-205ENST00000411884 CCDC85AQ96PX6 553 aaPredicted RBP7.92□□□□□ -1.14
CLHC1-205ENST00000411884 TFIP11Q9UBB9 837 aaKnown RBP7.92□□□□□ -1.14
CLHC1-205ENST00000411884 FSHRP23945 695 aa7.91□□□□□ -1.14
CLHC1-205ENST00000411884 NR5A1Q13285 461 aa7.91□□□□□ -1.14
CLHC1-205ENST00000411884 CFAP70Q5T0N1 1121 aa7.91□□□□□ -1.14
CLHC1-205ENST00000411884 RNF20Q5VTR2 975 aa7.91□□□□□ -1.14
CLHC1-205ENST00000411884 CYP4X1Q8N118 509 aa7.91□□□□□ -1.14
CLHC1-205ENST00000411884 TTC24A2A3L6 582 aaPredicted RBP7.9□□□□□ -1.14
CLHC1-205ENST00000411884 ATP9BO43861 1147 aa7.9□□□□□ -1.14
CLHC1-205ENST00000411884 NR3C2P08235 984 aa7.9□□□□□ -1.14
CLHC1-205ENST00000411884 SKIP12755 728 aa7.9□□□□□ -1.14
CLHC1-205ENST00000411884 SMPD1P17405 629 aa7.9□□□□□ -1.14
CLHC1-205ENST00000411884 RAB15P59190 212 aa7.9□□□□□ -1.14
CLHC1-205ENST00000411884 ARID3AQ99856 593 aa7.9□□□□□ -1.14
CLHC1-205ENST00000411884 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
CLHC1-205ENST00000411884 TRAF7Q6Q0C0 670 aa7.89□□□□□ -1.15
CLHC1-205ENST00000411884 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
CLHC1-205ENST00000411884 PDZRN3Q9UPQ7 1066 aa7.89□□□□□ -1.15
CLHC1-205ENST00000411884 MAFBQ9Y5Q3 323 aaPredicted RBP7.89□□□□□ -1.15
CLHC1-205ENST00000411884 NNTQ13423 1086 aa7.88□□□□□ -1.15
CLHC1-205ENST00000411884 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
CLHC1-205ENST00000411884 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
CLHC1-205ENST00000411884 CDCA7Q9BWT1 371 aaPredicted RBP7.88□□□□□ -1.15
CLHC1-205ENST00000411884 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
CLHC1-205ENST00000411884 USP17L5A8MUK1 530 aa7.87□□□□□ -1.15
CLHC1-205ENST00000411884 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
CLHC1-205ENST00000411884 PPP1R26Q5T8A7 1209 aaPredicted RBP7.87□□□□□ -1.15
CLHC1-205ENST00000411884 PLEKHM2Q8IWE5 1019 aa7.87□□□□□ -1.15
CLHC1-205ENST00000411884 CCDC116Q8IYX3 515 aa7.87□□□□□ -1.15
CLHC1-205ENST00000411884 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
CLHC1-205ENST00000411884 PCDHB11Q9Y5F2 797 aa7.87□□□□□ -1.15
CLHC1-205ENST00000411884 USP17L3A6NCW0 530 aa7.86□□□□□ -1.15
CLHC1-205ENST00000411884 USP17L4A6NCW7 530 aa7.86□□□□□ -1.15
CLHC1-205ENST00000411884 SRPK2P78362 688 aaKnown RBP7.86□□□□□ -1.15
CLHC1-205ENST00000411884 USP17L2Q6R6M4 530 aa7.86□□□□□ -1.15
CLHC1-205ENST00000411884 USP17L1Q7RTZ2 530 aa7.86□□□□□ -1.15
CLHC1-205ENST00000411884 DEPDC4Q8N2C3 294 aa7.86□□□□□ -1.15
CLHC1-205ENST00000411884 KLF16Q9BXK1 252 aaPredicted RBP7.86□□□□□ -1.15
CLHC1-205ENST00000411884 DOLKQ9UPQ8 538 aa7.86□□□□□ -1.15
CLHC1-205ENST00000411884 RFX1P22670 979 aa7.85□□□□□ -1.15
CLHC1-205ENST00000411884 DHX9Q08211 1270 aaKnown RBP7.85□□□□□ -1.15
CLHC1-205ENST00000411884 HPS1Q92902 700 aa7.85□□□□□ -1.15
CLHC1-205ENST00000411884 LZTS3O60299 673 aaPredicted RBP7.84□□□□□ -1.15
CLHC1-205ENST00000411884 LILRA1O75019 489 aa7.84□□□□□ -1.15
CLHC1-205ENST00000411884 SCTRP47872 440 aa7.84□□□□□ -1.15
CLHC1-205ENST00000411884 NCOA4Q13772 614 aa7.84□□□□□ -1.15
CLHC1-205ENST00000411884 OXLD1Q5BKU9 147 aa7.84□□□□□ -1.15
CLHC1-205ENST00000411884 ZNF784Q8NCA9 323 aaPredicted RBP7.84□□□□□ -1.15
CLHC1-205ENST00000411884 EMILIN1Q9Y6C2 1016 aa7.84□□□□□ -1.15
CLHC1-205ENST00000411884 GFRA3O60609 400 aa7.83□□□□□ -1.16
CLHC1-205ENST00000411884 ERVK-9P63128 1117 aa7.83□□□□□ -1.16
CLHC1-205ENST00000411884 KANK4Q5T7N3 995 aaPredicted RBP7.83□□□□□ -1.16
CLHC1-205ENST00000411884 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.82□□□□□ -1.16
CLHC1-205ENST00000411884 TIMP2P16035 220 aa7.82□□□□□ -1.16
CLHC1-205ENST00000411884 ADD1P35611 737 aaKnown RBP7.82□□□□□ -1.16
CLHC1-205ENST00000411884 WDR4P57081 412 aaKnown RBP7.82□□□□□ -1.16
CLHC1-205ENST00000411884 EML3Q32P44 896 aa7.82□□□□□ -1.16
CLHC1-205ENST00000411884 ITPKCQ96DU7 683 aa7.82□□□□□ -1.16
CLHC1-205ENST00000411884 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
CLHC1-205ENST00000411884 CYLDQ9NQC7 956 aa7.82□□□□□ -1.16
CLHC1-205ENST00000411884 NRG2O14511 850 aaPredicted RBP7.81□□□□□ -1.16
CLHC1-205ENST00000411884 ZIC2O95409 532 aaPredicted RBP7.81□□□□□ -1.16
CLHC1-205ENST00000411884 MYT1Q01538 1121 aa7.81□□□□□ -1.16
CLHC1-205ENST00000411884 USP4Q13107 963 aa7.81□□□□□ -1.16
CLHC1-205ENST00000411884 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
CLHC1-205ENST00000411884 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
CLHC1-205ENST00000411884 MKRN1Q9UHC7 482 aaKnown RBP7.81□□□□□ -1.16
CLHC1-205ENST00000411884 NOD1Q9Y239 953 aa7.81□□□□□ -1.16
CLHC1-205ENST00000411884 FAM187AA6NFU0 413 aa7.8□□□□□ -1.16
CLHC1-205ENST00000411884 AVPP01185 164 aa7.8□□□□□ -1.16
CLHC1-205ENST00000411884 CDCA8Q53HL2 280 aa7.8□□□□□ -1.16
CLHC1-205ENST00000411884 PBXIP1Q96AQ6 731 aa7.8□□□□□ -1.16
CLHC1-205ENST00000411884 OSBPL3Q9H4L5 887 aa7.8□□□□□ -1.16
CLHC1-205ENST00000411884 CBLBQ13191 982 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms