RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.344e-6■■■□□ 19.2
POLR1A-202ENST00000409024 LRP5O75197 1615 aa12.91□□□□□ -0.34
POLR1A-202ENST00000409024 PIK3C2AO00443 1686 aa12.9□□□□□ -0.34
POLR1A-202ENST00000409024 IL13P35225 146 aa12.9□□□□□ -0.34
POLR1A-202ENST00000409024 NLRP6P59044 892 aa12.9□□□□□ -0.34
POLR1A-202ENST00000409024 ABTB2Q8N961 1025 aa12.9□□□□□ -0.34
POLR1A-202ENST00000409024 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
POLR1A-202ENST00000409024 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
POLR1A-202ENST00000409024 APAF1O14727 1248 aa12.89□□□□□ -0.35
POLR1A-202ENST00000409024 NEFLP07196 543 aa12.89□□□□□ -0.35
POLR1A-202ENST00000409024 NEFMP07197 916 aa12.89□□□□□ -0.35
POLR1A-202ENST00000409024 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
POLR1A-202ENST00000409024 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
POLR1A-202ENST00000409024 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
POLR1A-202ENST00000409024 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
POLR1A-202ENST00000409024 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
POLR1A-202ENST00000409024 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
POLR1A-202ENST00000409024 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
POLR1A-202ENST00000409024 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
POLR1A-202ENST00000409024 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
POLR1A-202ENST00000409024 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
POLR1A-202ENST00000409024 FLT4P35916 1363 aa12.87□□□□□ -0.35
POLR1A-202ENST00000409024 PSDA5PKW4 1024 aaPredicted RBP12.87□□□□□ -0.35
POLR1A-202ENST00000409024 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
POLR1A-202ENST00000409024 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
POLR1A-202ENST00000409024 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
POLR1A-202ENST00000409024 E9PSI1 815 aa12.86□□□□□ -0.35
POLR1A-202ENST00000409024 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
POLR1A-202ENST00000409024 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
POLR1A-202ENST00000409024 YY1P25490 414 aa12.86□□□□□ -0.35
POLR1A-202ENST00000409024 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
POLR1A-202ENST00000409024 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
POLR1A-202ENST00000409024 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
POLR1A-202ENST00000409024 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
POLR1A-202ENST00000409024 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
POLR1A-202ENST00000409024 FOXO3O43524 673 aa12.85□□□□□ -0.35
POLR1A-202ENST00000409024 MAP3K19Q56UN5 1328 aa12.85□□□□□ -0.35
POLR1A-202ENST00000409024 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
POLR1A-202ENST00000409024 SLFN5Q08AF3 891 aa12.84□□□□□ -0.35
POLR1A-202ENST00000409024 WWC1Q8IX03 1113 aa12.84□□□□□ -0.35
POLR1A-202ENST00000409024 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
POLR1A-202ENST00000409024 TRPM3Q9HCF6 1732 aaPredicted RBP12.84□□□□□ -0.35
POLR1A-202ENST00000409024 USP19O94966 1318 aa12.84□□□□□ -0.35
POLR1A-202ENST00000409024 SLIT3O75094 1523 aa12.83□□□□□ -0.35
POLR1A-202ENST00000409024 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
POLR1A-202ENST00000409024 FBLN1P23142 703 aa12.83□□□□□ -0.36
POLR1A-202ENST00000409024 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
POLR1A-202ENST00000409024 AMPHP49418 695 aa12.83□□□□□ -0.36
POLR1A-202ENST00000409024 SUPT16HQ9Y5B9 1047 aaKnown RBP12.83□□□□□ -0.36
POLR1A-202ENST00000409024 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.36
POLR1A-202ENST00000409024 IL16Q14005 1332 aa12.83□□□□□ -0.36
POLR1A-202ENST00000409024 ARHGEF10O15013 1369 aa12.82□□□□□ -0.36
POLR1A-202ENST00000409024 BAG6P46379 1132 aa12.82□□□□□ -0.36
POLR1A-202ENST00000409024 EIF4A2Q14240 407 aaKnown RBP12.82□□□□□ -0.36
POLR1A-202ENST00000409024 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
POLR1A-202ENST00000409024 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
POLR1A-202ENST00000409024 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
POLR1A-202ENST00000409024 DUSP27Q5VZP5 1158 aa12.81□□□□□ -0.36
POLR1A-202ENST00000409024 UNC5CLQ8IV45 518 aa12.81□□□□□ -0.36
POLR1A-202ENST00000409024 IP6K1Q92551 441 aa12.81□□□□□ -0.36
POLR1A-202ENST00000409024 NFAT5O94916 1531 aa12.81□□□□□ -0.36
POLR1A-202ENST00000409024 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
POLR1A-202ENST00000409024 PEAK1Q9H792 1746 aa12.8□□□□□ -0.36
POLR1A-202ENST00000409024 HOXC9P31274 260 aa12.8□□□□□ -0.36
POLR1A-202ENST00000409024 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
POLR1A-202ENST00000409024 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
POLR1A-202ENST00000409024 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
POLR1A-202ENST00000409024 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
POLR1A-202ENST00000409024 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
POLR1A-202ENST00000409024 GCP02774 474 aa12.79□□□□□ -0.36
POLR1A-202ENST00000409024 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
POLR1A-202ENST00000409024 HSP90AB2PQ58FF8 381 aa12.79□□□□□ -0.36
POLR1A-202ENST00000409024 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
POLR1A-202ENST00000409024 KDRP35968 1356 aa12.79□□□□□ -0.36
POLR1A-202ENST00000409024 TNS3Q68CZ2 1445 aa12.79□□□□□ -0.36
POLR1A-202ENST00000409024 PXDNQ92626 1479 aa12.78□□□□□ -0.36
POLR1A-202ENST00000409024 ABCC6O95255 1503 aa12.78□□□□□ -0.36
POLR1A-202ENST00000409024 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
POLR1A-202ENST00000409024 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
POLR1A-202ENST00000409024 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
POLR1A-202ENST00000409024 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
POLR1A-202ENST00000409024 RIPK4P57078 832 aa12.77□□□□□ -0.37
POLR1A-202ENST00000409024 KRT27Q7Z3Y8 459 aa12.77□□□□□ -0.37
POLR1A-202ENST00000409024 FKBP8Q14318 412 aa12.76□□□□□ -0.37
POLR1A-202ENST00000409024 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
POLR1A-202ENST00000409024 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
POLR1A-202ENST00000409024 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
POLR1A-202ENST00000409024 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
POLR1A-202ENST00000409024 COL22A1Q8NFW1 1626 aaPredicted RBP12.76□□□□□ -0.37
POLR1A-202ENST00000409024 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
POLR1A-202ENST00000409024 HMOX1P09601 288 aa12.75□□□□□ -0.37
POLR1A-202ENST00000409024 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
POLR1A-202ENST00000409024 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
POLR1A-202ENST00000409024 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
POLR1A-202ENST00000409024 SOX12O15370 315 aa12.74□□□□□ -0.37
POLR1A-202ENST00000409024 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
POLR1A-202ENST00000409024 NEUROD2Q15784 382 aa12.74□□□□□ -0.37
POLR1A-202ENST00000409024 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
POLR1A-202ENST00000409024 EYA1Q99502 592 aa12.74□□□□□ -0.37
POLR1A-202ENST00000409024 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms