RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 NECTIN2Q92692 538 aa21.3■■□□□ 1
SNRNP70-202ENST00000401730 CHMP5Q9NZZ3 219 aa21.3■■□□□ 1
SNRNP70-202ENST00000401730 METP08581 1390 aa21.3■■□□□ 1
SNRNP70-202ENST00000401730 OTUD7AQ8TE49 926 aaPredicted RBP21.29■■□□□ 1
SNRNP70-202ENST00000401730 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
SNRNP70-202ENST00000401730 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
SNRNP70-202ENST00000401730 TRAK2O60296 914 aa21.28■■□□□ 1
SNRNP70-202ENST00000401730 SLC4A10Q6U841 1118 aa21.28■■□□□ 1
SNRNP70-202ENST00000401730 TBC1D9Q6ZT07 1266 aa21.28■■□□□ 1
SNRNP70-202ENST00000401730 ADGRB2O60241 1585 aa21.27■■□□□ 1
SNRNP70-202ENST00000401730 PNPLA6Q8IY17 1366 aa21.27■■□□□ 1
SNRNP70-202ENST00000401730 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
SNRNP70-202ENST00000401730 FAM43AQ8N2R8 423 aa21.27■■□□□ 1
SNRNP70-202ENST00000401730 NEO1Q92859 1461 aa21.27■■□□□ 1
SNRNP70-202ENST00000401730 SLC26A8Q96RN1 970 aa21.27■■□□□ 1
SNRNP70-202ENST00000401730 ALKQ9UM73 1620 aa21.27■□□□□ 0.99
SNRNP70-202ENST00000401730 FOXO3O43524 673 aa21.27■□□□□ 0.99
SNRNP70-202ENST00000401730 NUTM2GQ5VZR2 741 aa21.26■□□□□ 0.99
SNRNP70-202ENST00000401730 NAP1L5Q96NT1 182 aaPredicted RBP21.26■□□□□ 0.99
SNRNP70-202ENST00000401730 CCDC61Q9Y6R9 512 aa21.26■□□□□ 0.99
SNRNP70-202ENST00000401730 ARHGEF40Q8TER5 1519 aa21.25■□□□□ 0.99
SNRNP70-202ENST00000401730 RIMS2Q9UQ26 1411 aa21.25■□□□□ 0.99
SNRNP70-202ENST00000401730 ARHGAP31Q2M1Z3 1444 aa21.25■□□□□ 0.99
SNRNP70-202ENST00000401730 RRAGDQ9NQL2 400 aaPredicted RBP21.24■□□□□ 0.99
SNRNP70-202ENST00000401730 USP32Q8NFA0 1604 aa21.24■□□□□ 0.99
SNRNP70-202ENST00000401730 IFT57Q9NWB7 429 aa21.24■□□□□ 0.99
SNRNP70-202ENST00000401730 GOLGA6L3A6NEY3 463 aa21.24■□□□□ 0.99
SNRNP70-202ENST00000401730 XRCC6P12956 609 aaKnown RBP eCLIP21.23■□□□□ 0.995e-7■■□□□ 13.7
SNRNP70-202ENST00000401730 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
SNRNP70-202ENST00000401730 FAM135BQ49AJ0 1406 aa21.23■□□□□ 0.99
SNRNP70-202ENST00000401730 F6X3S4 739 aa21.23■□□□□ 0.99
SNRNP70-202ENST00000401730 TMEM131LA2VDJ0 1609 aa21.22■□□□□ 0.99
SNRNP70-202ENST00000401730 CFAP74Q9C0B2 1584 aa21.22■□□□□ 0.99
SNRNP70-202ENST00000401730 ZFYVE9O95405 1425 aa21.22■□□□□ 0.99
SNRNP70-202ENST00000401730 CEBPAP49715 358 aaPredicted RBP21.22■□□□□ 0.99
SNRNP70-202ENST00000401730 EIF4A2Q14240 407 aaKnown RBP21.22■□□□□ 0.99
SNRNP70-202ENST00000401730 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
SNRNP70-202ENST00000401730 PRR36Q9H6K5 1346 aa21.22■□□□□ 0.99
SNRNP70-202ENST00000401730 TSHZ3Q63HK5 1081 aa21.21■□□□□ 0.99
SNRNP70-202ENST00000401730 CALD1Q05682 793 aaKnown RBP21.21■□□□□ 0.99
SNRNP70-202ENST00000401730 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
SNRNP70-202ENST00000401730 TNPO1Q92973 898 aaKnown RBP21.21■□□□□ 0.99
SNRNP70-202ENST00000401730 VIRMAQ69YN4 1812 aaKnown RBP21.21■□□□□ 0.99
SNRNP70-202ENST00000401730 BMP2KLQ5H9B9 411 aa21.2■□□□□ 0.98
SNRNP70-202ENST00000401730 GSPT1P15170 499 aaKnown RBP21.2■□□□□ 0.98
SNRNP70-202ENST00000401730 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
SNRNP70-202ENST00000401730 LTV1Q96GA3 475 aaPredicted RBP21.19■□□□□ 0.98
SNRNP70-202ENST00000401730 MEIS3Q99687 375 aa21.19■□□□□ 0.98
SNRNP70-202ENST00000401730 SLC4A2P04920 1241 aa21.18■□□□□ 0.98
SNRNP70-202ENST00000401730 KIF2CQ99661 725 aa21.18■□□□□ 0.98
SNRNP70-202ENST00000401730 PREX1Q8TCU6 1659 aa21.18■□□□□ 0.98
SNRNP70-202ENST00000401730 ZNF853P0CG23 659 aa21.18■□□□□ 0.98
SNRNP70-202ENST00000401730 FOXD4L5Q5VV16 416 aaPredicted RBP21.18■□□□□ 0.98
SNRNP70-202ENST00000401730 FOXD4L4Q8WXT5 416 aaPredicted RBP21.18■□□□□ 0.98
SNRNP70-202ENST00000401730 API5Q9BZZ5 524 aaKnown RBP21.17■□□□□ 0.98
SNRNP70-202ENST00000401730 MAP2P11137 1827 aaKnown RBP21.17■□□□□ 0.98
SNRNP70-202ENST00000401730 GAS2L2Q8NHY3 880 aa21.17■□□□□ 0.98
SNRNP70-202ENST00000401730 ACEP12821 1306 aa21.16■□□□□ 0.98
SNRNP70-202ENST00000401730 SSFA2P28290 1259 aa21.16■□□□□ 0.98
SNRNP70-202ENST00000401730 G2E3Q7L622 706 aa21.16■□□□□ 0.98
SNRNP70-202ENST00000401730 ZNF692Q9BU19 519 aaPredicted RBP21.16■□□□□ 0.98
SNRNP70-202ENST00000401730 CPS1P31327 1500 aa21.16■□□□□ 0.98
SNRNP70-202ENST00000401730 RBM25P49756 843 aaKnown RBP21.15■□□□□ 0.98
SNRNP70-202ENST00000401730 PLEKHM2Q8IWE5 1019 aa21.15■□□□□ 0.98
SNRNP70-202ENST00000401730 A2ML1A8K2U0 1454 aa21.15■□□□□ 0.98
SNRNP70-202ENST00000401730 ZBTB7CA1YPR0 619 aa21.15■□□□□ 0.98
SNRNP70-202ENST00000401730 L1TD1Q5T7N2 865 aaKnown RBP21.15■□□□□ 0.98
SNRNP70-202ENST00000401730 ABCC4O15439 1325 aa21.15■□□□□ 0.98
SNRNP70-202ENST00000401730 LMOD3Q0VAK6 560 aa21.14■□□□□ 0.98
SNRNP70-202ENST00000401730 C14orf37Q86TY3 774 aa21.14■□□□□ 0.98
SNRNP70-202ENST00000401730 NCLP19338 710 aaKnown RBP21.14■□□□□ 0.97
SNRNP70-202ENST00000401730 NOL8Q76FK4 1167 aaKnown RBP21.14■□□□□ 0.97
SNRNP70-202ENST00000401730 CHAMP1Q96JM3 812 aa21.14■□□□□ 0.97
SNRNP70-202ENST00000401730 RBM33Q96EV2 1170 aaKnown RBP21.13■□□□□ 0.97
SNRNP70-202ENST00000401730 RICTORQ6R327 1708 aa21.13■□□□□ 0.97
SNRNP70-202ENST00000401730 CDC45O75419 566 aa21.12■□□□□ 0.97
SNRNP70-202ENST00000401730 ARHGAP45Q92619 1136 aa21.12■□□□□ 0.97
SNRNP70-202ENST00000401730 EDC4Q6P2E9 1401 aaKnown RBP21.11■□□□□ 0.97
SNRNP70-202ENST00000401730 TTC21BQ7Z4L5 1316 aa21.11■□□□□ 0.97
SNRNP70-202ENST00000401730 TPRNQ4KMQ1 711 aa21.11■□□□□ 0.97
SNRNP70-202ENST00000401730 TSPYL4Q9UJ04 414 aa21.11■□□□□ 0.97
SNRNP70-202ENST00000401730 EXOC6BQ9Y2D4 811 aa21.11■□□□□ 0.97
SNRNP70-202ENST00000401730 K7ELQ4 463 aaPredicted RBP21.1■□□□□ 0.97
SNRNP70-202ENST00000401730 ZNF428Q96B54 188 aa21.1■□□□□ 0.97
SNRNP70-202ENST00000401730 VSIG10Q8N0Z9 540 aa21.1■□□□□ 0.97
SNRNP70-202ENST00000401730 MED14O60244 1454 aa21.1■□□□□ 0.97
SNRNP70-202ENST00000401730 LTKP29376 864 aa21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 NGDNQ8NEJ9 315 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 CHMP4BQ9H444 224 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 ROBO2Q9HCK4 1378 aa21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 PKP1Q13835 747 aa21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 GAS2L3Q86XJ1 694 aa21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 RTF1Q92541 710 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-202ENST00000401730 AMPHP49418 695 aa21.08■□□□□ 0.97
SNRNP70-202ENST00000401730 MTHFSDQ2M296 383 aaKnown RBP21.08■□□□□ 0.97
SNRNP70-202ENST00000401730 MSH6P52701 1360 aa21.08■□□□□ 0.97
SNRNP70-202ENST00000401730 CEP85Q6P2H3 762 aa21.08■□□□□ 0.96
SNRNP70-202ENST00000401730 DCTPP1Q9H773 170 aa21.08■□□□□ 0.96
SNRNP70-202ENST00000401730 SDSP20132 328 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms