RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
PPP4R1-203ENST00000400556 SLC52A1Q9NWF4 448 aa13.18□□□□□ -0.3
PPP4R1-203ENST00000400556 PTPRMP28827 1452 aa13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 MLH3Q9UHC1 1453 aa13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 BMP2KLQ5H9B9 411 aa13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 CHAMP1Q96JM3 812 aa13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 PUS7Q96PZ0 661 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 GSPT1P15170 499 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-203ENST00000400556 AK9Q5TCS8 1911 aa13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 FOXD4L5Q5VV16 416 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 FOXD4L4Q8WXT5 416 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 PNNQ9H307 717 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 ZMYM3Q14202 1370 aa13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 MCM10Q7L590 875 aa13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 PIK3C2BO00750 1634 aa13.16□□□□□ -0.3
PPP4R1-203ENST00000400556 GNAI1P63096 354 aa13.15□□□□□ -0.3
PPP4R1-203ENST00000400556 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
PPP4R1-203ENST00000400556 PKP1Q13835 747 aa13.15□□□□□ -0.3
PPP4R1-203ENST00000400556 K7ELQ4 463 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-203ENST00000400556 IL13P35225 146 aa13.14□□□□□ -0.31
PPP4R1-203ENST00000400556 MRE11P49959 708 aa13.14□□□□□ -0.31
PPP4R1-203ENST00000400556 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
PPP4R1-203ENST00000400556 TSHZ3Q63HK5 1081 aa13.14□□□□□ -0.31
PPP4R1-203ENST00000400556 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
PPP4R1-203ENST00000400556 PNPLA6Q8IY17 1366 aa13.14□□□□□ -0.31
PPP4R1-203ENST00000400556 DDIT3P35638 169 aa13.13□□□□□ -0.31
PPP4R1-203ENST00000400556 FAM135BQ49AJ0 1406 aa13.13□□□□□ -0.31
PPP4R1-203ENST00000400556 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
PPP4R1-203ENST00000400556 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
PPP4R1-203ENST00000400556 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
PPP4R1-203ENST00000400556 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
PPP4R1-203ENST00000400556 SLC4A10Q6U841 1118 aa13.13□□□□□ -0.31
PPP4R1-203ENST00000400556 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-203ENST00000400556 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
PPP4R1-203ENST00000400556 SNX21Q969T3 373 aa13.12□□□□□ -0.31
PPP4R1-203ENST00000400556 CDC45O75419 566 aa13.12□□□□□ -0.31
PPP4R1-203ENST00000400556 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-203ENST00000400556 COG3Q96JB2 828 aa13.12□□□□□ -0.31
PPP4R1-203ENST00000400556 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 F6X3S4 739 aa13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 TRIM44Q96DX7 344 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 MEIS3Q99687 375 aa13.11□□□□□ -0.31
PPP4R1-203ENST00000400556 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
PPP4R1-203ENST00000400556 ABCC4O15439 1325 aa13.1□□□□□ -0.31
PPP4R1-203ENST00000400556 MAP2P11137 1827 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-203ENST00000400556 NUDT16Q96DE0 195 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-203ENST00000400556 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 ARHGEF40Q8TER5 1519 aa13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 DIP2CQ9Y2E4 1556 aa13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 FOXO3O43524 673 aa13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
PPP4R1-203ENST00000400556 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.31
PPP4R1-203ENST00000400556 ESPNB1AK53 854 aa13.08□□□□□ -0.32
PPP4R1-203ENST00000400556 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-203ENST00000400556 CALD1Q05682 793 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-203ENST00000400556 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
PPP4R1-203ENST00000400556 ALKQ9UM73 1620 aa13.08□□□□□ -0.32
PPP4R1-203ENST00000400556 BAG4O95429 457 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 SDSP20132 328 aa13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 CAVIN1Q6NZI2 390 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 MED14O60244 1454 aa13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 TTC22Q5TAA0 569 aa13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 G2E3Q7L622 706 aa13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
PPP4R1-203ENST00000400556 RIMS2Q9UQ26 1411 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 CLCN1P35523 988 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 CFAP74Q9C0B2 1584 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 EIF4A2Q14240 407 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 DCTPP1Q9H773 170 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 METP08581 1390 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 MSH6P52701 1360 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
PPP4R1-203ENST00000400556 TMEM131LA2VDJ0 1609 aa13.05□□□□□ -0.32
PPP4R1-203ENST00000400556 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
PPP4R1-203ENST00000400556 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-203ENST00000400556 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
PPP4R1-203ENST00000400556 GOLGA6L22H0YM25 854 aa13.05□□□□□ -0.32
PPP4R1-203ENST00000400556 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
PPP4R1-203ENST00000400556 DTNBO60941 627 aa13.04□□□□□ -0.32
PPP4R1-203ENST00000400556 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-203ENST00000400556 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
PPP4R1-203ENST00000400556 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-203ENST00000400556 PRPF40AO75400 957 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms