RNA–Protein interactions for RNA: ENST00000397463.2

LYPD1-202, Transcript of LY6/PLAUR domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYPD1, Length 1,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-202ENST00000397463 TRMT2AQ8IZ69 625 aaKnown RBP27.51■■□□□ 1.99
LYPD1-202ENST00000397463 SPINK5Q9NQ38 1064 aaPredicted RBP27.51■■□□□ 1.99
LYPD1-202ENST00000397463 KCNH5Q8NCM2 988 aa27.51■■□□□ 1.99
LYPD1-202ENST00000397463 RCAN3Q9UKA8 241 aa27.51■■□□□ 1.99
LYPD1-202ENST00000397463 NFAT5O94916 1531 aa27.51■■□□□ 1.99
LYPD1-202ENST00000397463 NPHP3Q7Z494 1330 aa27.5■■□□□ 1.99
LYPD1-202ENST00000397463 LMOD2Q6P5Q4 547 aa27.5■■□□□ 1.99
LYPD1-202ENST00000397463 RNF123Q5XPI4 1314 aa27.49■■□□□ 1.99
LYPD1-202ENST00000397463 WDR63Q8IWG1 891 aa27.49■■□□□ 1.99
LYPD1-202ENST00000397463 DDX17Q92841 729 aaKnown RBP27.49■■□□□ 1.99
LYPD1-202ENST00000397463 LTN1O94822 1766 aa27.49■■□□□ 1.99
LYPD1-202ENST00000397463 RGPD1P0DJD0 1748 aa27.48■■□□□ 1.99
LYPD1-202ENST00000397463 HOXC9P31274 260 aa27.48■■□□□ 1.99
LYPD1-202ENST00000397463 ALS2Q96Q42 1657 aa27.47■■□□□ 1.99
LYPD1-202ENST00000397463 RTL1A6NKG5 1358 aa27.47■■□□□ 1.99
LYPD1-202ENST00000397463 SLIT3O75094 1523 aa27.47■■□□□ 1.99
LYPD1-202ENST00000397463 IRX6P78412 446 aaPredicted RBP27.47■■□□□ 1.99
LYPD1-202ENST00000397463 RIPK4P57078 832 aa27.46■■□□□ 1.99
LYPD1-202ENST00000397463 BRINP3Q76B58 766 aa27.46■■□□□ 1.99
LYPD1-202ENST00000397463 PHACTR3Q96KR7 559 aa27.46■■□□□ 1.99
LYPD1-202ENST00000397463 SLAIN2Q9P270 581 aa27.46■■□□□ 1.99
LYPD1-202ENST00000397463 SULT6B1Q6IMI4 303 aa27.45■■□□□ 1.99
LYPD1-202ENST00000397463 USP19O94966 1318 aa27.45■■□□□ 1.98
LYPD1-202ENST00000397463 TRIM35Q9UPQ4 493 aa27.44■■□□□ 1.98
LYPD1-202ENST00000397463 GCP02774 474 aa27.44■■□□□ 1.98
LYPD1-202ENST00000397463 PXDNQ92626 1479 aa27.43■■□□□ 1.98
LYPD1-202ENST00000397463 AEBP1Q8IUX7 1158 aa27.43■■□□□ 1.98
LYPD1-202ENST00000397463 ARHGEF10O15013 1369 aa27.43■■□□□ 1.98
LYPD1-202ENST00000397463 NFE2L2Q16236 605 aa27.42■■□□□ 1.98
LYPD1-202ENST00000397463 PHRF1Q9P1Y6 1649 aaKnown RBP27.41■■□□□ 1.98
LYPD1-202ENST00000397463 IP6K1Q92551 441 aa27.4■■□□□ 1.98
LYPD1-202ENST00000397463 PLEKHG5O94827 1062 aa27.4■■□□□ 1.98
LYPD1-202ENST00000397463 TNS3Q68CZ2 1445 aa27.4■■□□□ 1.98
LYPD1-202ENST00000397463 EYA1Q99502 592 aa27.38■■□□□ 1.97
LYPD1-202ENST00000397463 IGSF1Q8N6C5 1336 aa27.38■■□□□ 1.97
LYPD1-202ENST00000397463 RRP1P56182 461 aaKnown RBP27.37■■□□□ 1.97
LYPD1-202ENST00000397463 ARHGEF25Q86VW2 580 aa27.37■■□□□ 1.97
LYPD1-202ENST00000397463 MED1Q15648 1581 aaPredicted RBP27.36■■□□□ 1.97
LYPD1-202ENST00000397463 ERICH6BQ5W0A0 696 aa27.36■■□□□ 1.97
LYPD1-202ENST00000397463 KDRP35968 1356 aa27.36■■□□□ 1.97
LYPD1-202ENST00000397463 SPATA31A3Q5VYP0 1347 aa27.36■■□□□ 1.97
LYPD1-202ENST00000397463 ZBTB7CA1YPR0 619 aa27.36■■□□□ 1.97
LYPD1-202ENST00000397463 MYH16Q9H6N6 1097 aa27.36■■□□□ 1.97
LYPD1-202ENST00000397463 LTV1Q96GA3 475 aaPredicted RBP27.35■■□□□ 1.97
LYPD1-202ENST00000397463 IL16Q14005 1332 aa27.33■■□□□ 1.97
LYPD1-202ENST00000397463 DLG5Q8TDM6 1919 aa27.33■■□□□ 1.97
LYPD1-202ENST00000397463 SOS2Q07890 1332 aaPredicted RBP27.31■■□□□ 1.96
LYPD1-202ENST00000397463 LMOD3Q0VAK6 560 aa27.3■■□□□ 1.96
LYPD1-202ENST00000397463 LTBP4Q8N2S1 1624 aa27.3■■□□□ 1.96
LYPD1-202ENST00000397463 FANCIQ9NVI1 1328 aa27.27■■□□□ 1.96
LYPD1-202ENST00000397463 ZC3H6P61129 1189 aaKnown RBP27.27■■□□□ 1.96
LYPD1-202ENST00000397463 CRYBG1Q9Y4K1 1723 aa27.26■■□□□ 1.95
LYPD1-202ENST00000397463 CALD1Q05682 793 aaKnown RBP27.26■■□□□ 1.95
LYPD1-202ENST00000397463 CABLES1Q8TDN4 633 aa27.26■■□□□ 1.95
LYPD1-202ENST00000397463 TSR2Q969E8 191 aaKnown RBP27.25■■□□□ 1.95
LYPD1-202ENST00000397463 NHSL1Q5SYE7 1610 aa27.25■■□□□ 1.95
LYPD1-202ENST00000397463 THUMPD2Q9BTF0 503 aaKnown RBP27.24■■□□□ 1.95
LYPD1-202ENST00000397463 PLIN1O60240 522 aa27.23■■□□□ 1.95
LYPD1-202ENST00000397463 NBPF6Q5VWK0 638 aa27.23■■□□□ 1.95
LYPD1-202ENST00000397463 NBPF4Q96M43 638 aa27.23■■□□□ 1.95
LYPD1-202ENST00000397463 AXIN2Q9Y2T1 843 aa27.23■■□□□ 1.95
LYPD1-202ENST00000397463 FAM83GA6ND36 823 aa27.22■■□□□ 1.95
LYPD1-202ENST00000397463 USHBP1Q8N6Y0 703 aa27.22■■□□□ 1.95
LYPD1-202ENST00000397463 MTHFSDQ2M296 383 aaKnown RBP27.21■■□□□ 1.95
LYPD1-202ENST00000397463 ANKRD24Q8TF21 1146 aa27.21■■□□□ 1.95
LYPD1-202ENST00000397463 RGPD2P0DJD1 1756 aa27.21■■□□□ 1.95
LYPD1-202ENST00000397463 GAS2L2Q8NHY3 880 aa27.2■■□□□ 1.94
LYPD1-202ENST00000397463 PPP4R2Q9NY27 417 aa27.2■■□□□ 1.94
LYPD1-202ENST00000397463 RGPD5Q99666 1765 aa27.2■■□□□ 1.94
LYPD1-202ENST00000397463 LRRC59Q96AG4 307 aaKnown RBP27.19■■□□□ 1.94
LYPD1-202ENST00000397463 DCTN1Q14203 1278 aa27.19■■□□□ 1.94
LYPD1-202ENST00000397463 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.19■■□□□ 1.94
LYPD1-202ENST00000397463 IFT57Q9NWB7 429 aa27.19■■□□□ 1.94
LYPD1-202ENST00000397463 BCAR3O75815 825 aa27.18■■□□□ 1.94
LYPD1-202ENST00000397463 LAS1LQ9Y4W2 734 aaKnown RBP27.18■■□□□ 1.94
LYPD1-202ENST00000397463 CT47B1P0C2W7 299 aaPredicted RBP27.17■■□□□ 1.94
LYPD1-202ENST00000397463 GNAI1P63096 354 aa27.17■■□□□ 1.94
LYPD1-202ENST00000397463 EXOSC9Q06265 439 aaKnown RBP27.17■■□□□ 1.94
LYPD1-202ENST00000397463 CPDO75976 1380 aa27.17■■□□□ 1.94
LYPD1-202ENST00000397463 COL18A1P39060 1754 aa27.17■■□□□ 1.94
LYPD1-202ENST00000397463 ERBB3P21860 1342 aa27.16■■□□□ 1.94
LYPD1-202ENST00000397463 ZNF853P0CG23 659 aa27.16■■□□□ 1.94
LYPD1-202ENST00000397463 ROBO1Q9Y6N7 1651 aa27.16■■□□□ 1.94
LYPD1-202ENST00000397463 ABCC6O95255 1503 aa27.16■■□□□ 1.94
LYPD1-202ENST00000397463 RARSP54136 660 aaKnown RBP27.15■■□□□ 1.94
LYPD1-202ENST00000397463 CFAP44Q96MT7 982 aa27.15■■□□□ 1.94
LYPD1-202ENST00000397463 KIAA0232Q92628 1395 aa27.15■■□□□ 1.94
LYPD1-202ENST00000397463 NCAPD2Q15021 1401 aa27.15■■□□□ 1.94
LYPD1-202ENST00000397463 MCM10Q7L590 875 aa27.14■■□□□ 1.94
LYPD1-202ENST00000397463 CAMTA1Q9Y6Y1 1673 aa27.14■■□□□ 1.93
LYPD1-202ENST00000397463 RTF1Q92541 710 aaKnown RBP27.13■■□□□ 1.93
LYPD1-202ENST00000397463 CHRNA2Q15822 529 aa27.12■■□□□ 1.93
LYPD1-202ENST00000397463 MBIPQ9NS73 344 aa27.11■■□□□ 1.93
LYPD1-202ENST00000397463 ABCA3Q99758 1704 aa27.11■■□□□ 1.93
LYPD1-202ENST00000397463 HTATSF1O43719 755 aaKnown RBP27.1■■□□□ 1.93
LYPD1-202ENST00000397463 C20orf194Q5TEA3 1177 aa27.1■■□□□ 1.93
LYPD1-202ENST00000397463 EXOC6Q8TAG9 804 aa27.1■■□□□ 1.93
LYPD1-202ENST00000397463 HAP1P54257 671 aaPredicted RBP27.09■■□□□ 1.93
LYPD1-202ENST00000397463 LMO7Q8WWI1 1683 aa27.09■■□□□ 1.93
LYPD1-202ENST00000397463 GNAT3A8MTJ3 354 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms