RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 SIRT2Q8IXJ6 389 aa23.02■■□□□ 1.28
IFFO1-204ENST00000396840 NUTM2FA1L443 756 aa23■■□□□ 1.27
IFFO1-204ENST00000396840 WASLO00401 505 aaPredicted RBP23■■□□□ 1.27
IFFO1-204ENST00000396840 TRAK2O60296 914 aa22.99■■□□□ 1.27
IFFO1-204ENST00000396840 IFT57Q9NWB7 429 aa22.99■■□□□ 1.27
IFFO1-204ENST00000396840 HSP90AB1P08238 724 aaKnown RBP22.99■■□□□ 1.27
IFFO1-204ENST00000396840 COG3Q96JB2 828 aa22.99■■□□□ 1.27
IFFO1-204ENST00000396840 RBM25P49756 843 aaKnown RBP22.98■■□□□ 1.27
IFFO1-204ENST00000396840 KRT24Q2M2I5 525 aa22.98■■□□□ 1.27
IFFO1-204ENST00000396840 BMP2KLQ5H9B9 411 aa22.98■■□□□ 1.27
IFFO1-204ENST00000396840 RBM42Q9BTD8 480 aaKnown RBP22.98■■□□□ 1.27
IFFO1-204ENST00000396840 RIMS2Q9UQ26 1411 aa22.98■■□□□ 1.27
IFFO1-204ENST00000396840 CALD1Q05682 793 aaKnown RBP22.98■■□□□ 1.27
IFFO1-204ENST00000396840 NUDT16Q96DE0 195 aaKnown RBP22.98■■□□□ 1.27
IFFO1-204ENST00000396840 PANK2Q9BZ23 570 aa22.98■■□□□ 1.27
IFFO1-204ENST00000396840 SOX12O15370 315 aa22.97■■□□□ 1.27
IFFO1-204ENST00000396840 CD2BP2O95400 341 aaKnown RBP22.97■■□□□ 1.27
IFFO1-204ENST00000396840 L1TD1Q5T7N2 865 aaKnown RBP22.97■■□□□ 1.27
IFFO1-204ENST00000396840 GOLGA6L3A6NEY3 463 aa22.97■■□□□ 1.27
IFFO1-204ENST00000396840 HSP90AA1P07900 732 aaKnown RBP22.97■■□□□ 1.27
IFFO1-204ENST00000396840 TBC1D9Q6ZT07 1266 aa22.97■■□□□ 1.27
IFFO1-204ENST00000396840 ZNF428Q96B54 188 aa22.97■■□□□ 1.27
IFFO1-204ENST00000396840 GCC1Q96CN9 775 aa22.97■■□□□ 1.27
IFFO1-204ENST00000396840 METP08581 1390 aa22.96■■□□□ 1.27
IFFO1-204ENST00000396840 AEBP1Q8IUX7 1158 aa22.96■■□□□ 1.27
IFFO1-204ENST00000396840 ATP7BP35670 1465 aa22.96■■□□□ 1.27
IFFO1-204ENST00000396840 XRCC6P12956 609 aaKnown RBP eCLIP22.96■■□□□ 1.27
IFFO1-204ENST00000396840 ZNF692Q9BU19 519 aaPredicted RBP22.96■■□□□ 1.27
IFFO1-204ENST00000396840 CDC42BPGQ6DT37 1551 aa22.96■■□□□ 1.27
IFFO1-204ENST00000396840 A2ML1A8K2U0 1454 aa22.96■■□□□ 1.27
IFFO1-204ENST00000396840 APBB1O00213 710 aa22.95■■□□□ 1.26
IFFO1-204ENST00000396840 ZNF853P0CG23 659 aa22.95■■□□□ 1.26
IFFO1-204ENST00000396840 BRPF1P55201 1214 aaPredicted RBP22.95■■□□□ 1.26
IFFO1-204ENST00000396840 CFAP44Q96MT7 982 aa22.95■■□□□ 1.26
IFFO1-204ENST00000396840 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
IFFO1-204ENST00000396840 ABCC4O15439 1325 aa22.94■■□□□ 1.26
IFFO1-204ENST00000396840 FAM43AQ8N2R8 423 aa22.94■■□□□ 1.26
IFFO1-204ENST00000396840 KIF2CQ99661 725 aa22.94■■□□□ 1.26
IFFO1-204ENST00000396840 TSPOAP1O95153 1857 aa22.93■■□□□ 1.26
IFFO1-204ENST00000396840 EIF5BO60841 1220 aaKnown RBP22.93■■□□□ 1.26
IFFO1-204ENST00000396840 PTCH1Q13635 1447 aa22.93■■□□□ 1.26
IFFO1-204ENST00000396840 EDC4Q6P2E9 1401 aaKnown RBP22.93■■□□□ 1.26
IFFO1-204ENST00000396840 CPS1P31327 1500 aa22.91■■□□□ 1.26
IFFO1-204ENST00000396840 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
IFFO1-204ENST00000396840 C16orf71Q8IYS4 520 aaPredicted RBP22.91■■□□□ 1.26
IFFO1-204ENST00000396840 TNPO1Q92973 898 aaKnown RBP22.91■■□□□ 1.26
IFFO1-204ENST00000396840 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
IFFO1-204ENST00000396840 MCM10Q7L590 875 aa22.91■■□□□ 1.26
IFFO1-204ENST00000396840 CHMP4BQ9H444 224 aaKnown RBP22.91■■□□□ 1.26
IFFO1-204ENST00000396840 CCDC61Q9Y6R9 512 aa22.91■■□□□ 1.26
IFFO1-204ENST00000396840 RRAGDQ9NQL2 400 aaPredicted RBP22.9■■□□□ 1.26
IFFO1-204ENST00000396840 DLG5Q8TDM6 1919 aa22.89■■□□□ 1.26
IFFO1-204ENST00000396840 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.26
IFFO1-204ENST00000396840 API5Q9BZZ5 524 aaKnown RBP22.89■■□□□ 1.26
IFFO1-204ENST00000396840 SNX21Q969T3 373 aa22.89■■□□□ 1.25
IFFO1-204ENST00000396840 GSPT1P15170 499 aaKnown RBP22.88■■□□□ 1.25
IFFO1-204ENST00000396840 PIK3R4Q99570 1358 aa22.88■■□□□ 1.25
IFFO1-204ENST00000396840 CDK12Q9NYV4 1490 aaPredicted RBP22.88■■□□□ 1.25
IFFO1-204ENST00000396840 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
IFFO1-204ENST00000396840 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
IFFO1-204ENST00000396840 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
IFFO1-204ENST00000396840 DDIT3P35638 169 aa22.87■■□□□ 1.25
IFFO1-204ENST00000396840 FSD2A1L4K1 749 aa22.86■■□□□ 1.25
IFFO1-204ENST00000396840 OTUD7AQ8TE49 926 aaPredicted RBP22.86■■□□□ 1.25
IFFO1-204ENST00000396840 MIS18AQ9NYP9 233 aa22.86■■□□□ 1.25
IFFO1-204ENST00000396840 DDX11L8A8MPP1 907 aa22.86■■□□□ 1.25
IFFO1-204ENST00000396840 PRR36Q9H6K5 1346 aa22.86■■□□□ 1.25
IFFO1-204ENST00000396840 DLC1Q96QB1 1528 aa22.86■■□□□ 1.25
IFFO1-204ENST00000396840 EIF4A2Q14240 407 aaKnown RBP22.85■■□□□ 1.25
IFFO1-204ENST00000396840 NCOA3Q9Y6Q9 1424 aa22.85■■□□□ 1.25
IFFO1-204ENST00000396840 PLEKHM2Q8IWE5 1019 aa22.85■■□□□ 1.25
IFFO1-204ENST00000396840 ESF1Q9H501 851 aaKnown RBP22.85■■□□□ 1.25
IFFO1-204ENST00000396840 SMARCA5O60264 1052 aaPredicted RBP22.84■■□□□ 1.25
IFFO1-204ENST00000396840 CDC45O75419 566 aa22.84■■□□□ 1.25
IFFO1-204ENST00000396840 K7ELQ4 463 aaPredicted RBP22.83■■□□□ 1.25
IFFO1-204ENST00000396840 GAS2L2Q8NHY3 880 aa22.83■■□□□ 1.25
IFFO1-204ENST00000396840 SETD1AO15047 1707 aaKnown RBP22.83■■□□□ 1.25
IFFO1-204ENST00000396840 AATKQ6ZMQ8 1374 aa22.83■■□□□ 1.24
IFFO1-204ENST00000396840 HSP90AB2PQ58FF8 381 aa22.83■■□□□ 1.24
IFFO1-204ENST00000396840 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
IFFO1-204ENST00000396840 RAB3GAP1Q15042 981 aa22.8■■□□□ 1.24
IFFO1-204ENST00000396840 DCTPP1Q9H773 170 aa22.8■■□□□ 1.24
IFFO1-204ENST00000396840 SSFA2P28290 1259 aa22.8■■□□□ 1.24
IFFO1-204ENST00000396840 GBP4Q96PP9 640 aa22.79■■□□□ 1.24
IFFO1-204ENST00000396840 MEIS3Q99687 375 aa22.79■■□□□ 1.24
IFFO1-204ENST00000396840 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
IFFO1-204ENST00000396840 FOXO3O43524 673 aa22.78■■□□□ 1.24
IFFO1-204ENST00000396840 SLC4A10Q6U841 1118 aa22.78■■□□□ 1.24
IFFO1-204ENST00000396840 GRPEL1Q9HAV7 217 aa22.78■■□□□ 1.24
IFFO1-204ENST00000396840 MSH6P52701 1360 aa22.78■■□□□ 1.24
IFFO1-204ENST00000396840 TTC22Q5TAA0 569 aa22.78■■□□□ 1.24
IFFO1-204ENST00000396840 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
IFFO1-204ENST00000396840 SPATA31D1Q6ZQQ2 1576 aa22.78■■□□□ 1.24
IFFO1-204ENST00000396840 ACEP12821 1306 aa22.77■■□□□ 1.24
IFFO1-204ENST00000396840 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
IFFO1-204ENST00000396840 SLC4A2P04920 1241 aa22.76■■□□□ 1.23
IFFO1-204ENST00000396840 CEP85Q6P2H3 762 aa22.76■■□□□ 1.23
IFFO1-204ENST00000396840 MRE11P49959 708 aa22.76■■□□□ 1.23
IFFO1-204ENST00000396840 GAS2L3Q86XJ1 694 aa22.76■■□□□ 1.23
IFFO1-204ENST00000396840 AK9Q5TCS8 1911 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms