RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ABCC3O15438 1527 aa17.71■□□□□ 0.43
CLIP2-203ENST00000395060 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
CLIP2-203ENST00000395060 CCDC173Q0VFZ6 552 aa17.71■□□□□ 0.43
CLIP2-203ENST00000395060 ZSCAN30Q86W11 494 aa17.71■□□□□ 0.43
CLIP2-203ENST00000395060 A0A1W2PP64 1363 aa17.71■□□□□ 0.42
CLIP2-203ENST00000395060 RBSNQ9H1K0 784 aa17.7■□□□□ 0.42
CLIP2-203ENST00000395060 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
CLIP2-203ENST00000395060 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
CLIP2-203ENST00000395060 RPGRIP1LQ68CZ1 1315 aa17.7■□□□□ 0.42
CLIP2-203ENST00000395060 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
CLIP2-203ENST00000395060 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
CLIP2-203ENST00000395060 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
CLIP2-203ENST00000395060 ZSCAN23Q3MJ62 389 aa17.69■□□□□ 0.42
CLIP2-203ENST00000395060 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
CLIP2-203ENST00000395060 CDC45O75419 566 aa17.68■□□□□ 0.42
CLIP2-203ENST00000395060 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
CLIP2-203ENST00000395060 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
CLIP2-203ENST00000395060 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
CLIP2-203ENST00000395060 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
CLIP2-203ENST00000395060 ANKRD36BQ8N2N9 1353 aa17.67■□□□□ 0.42
CLIP2-203ENST00000395060 SYCE3A1L190 88 aa17.67■□□□□ 0.42
CLIP2-203ENST00000395060 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
CLIP2-203ENST00000395060 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
CLIP2-203ENST00000395060 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
CLIP2-203ENST00000395060 VAMP4O75379 141 aa17.66■□□□□ 0.42
CLIP2-203ENST00000395060 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
CLIP2-203ENST00000395060 ISY1Q9ULR0 285 aaKnown RBP17.66■□□□□ 0.42
CLIP2-203ENST00000395060 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
CLIP2-203ENST00000395060 GCC1Q96CN9 775 aa17.65■□□□□ 0.42
CLIP2-203ENST00000395060 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
CLIP2-203ENST00000395060 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
CLIP2-203ENST00000395060 MRPL50Q8N5N7 158 aaKnown RBP17.65■□□□□ 0.42
CLIP2-203ENST00000395060 NEO1Q92859 1461 aa17.64■□□□□ 0.42
CLIP2-203ENST00000395060 DTNBO60941 627 aa17.64■□□□□ 0.41
CLIP2-203ENST00000395060 TPM2P07951 284 aa17.64■□□□□ 0.41
CLIP2-203ENST00000395060 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
CLIP2-203ENST00000395060 MBIPQ9NS73 344 aa17.64■□□□□ 0.41
CLIP2-203ENST00000395060 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
CLIP2-203ENST00000395060 PLEKHM2Q8IWE5 1019 aa17.64■□□□□ 0.41
CLIP2-203ENST00000395060 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
CLIP2-203ENST00000395060 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
CLIP2-203ENST00000395060 LMBRD1Q9NUN5 540 aa17.63■□□□□ 0.41
CLIP2-203ENST00000395060 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
CLIP2-203ENST00000395060 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
CLIP2-203ENST00000395060 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
CLIP2-203ENST00000395060 GPT2Q8TD30 523 aa17.63■□□□□ 0.41
CLIP2-203ENST00000395060 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
CLIP2-203ENST00000395060 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
CLIP2-203ENST00000395060 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
CLIP2-203ENST00000395060 SIGLEC1Q9BZZ2 1709 aa17.62■□□□□ 0.41
CLIP2-203ENST00000395060 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
CLIP2-203ENST00000395060 DIP2CQ9Y2E4 1556 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 SOX12O15370 315 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 OFD1O75665 1012 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 CFAP74Q9C0B2 1584 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 UQCRHLA0A096LP55 91 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 PTMAP06454 111 aaKnown RBP17.61■□□□□ 0.41
CLIP2-203ENST00000395060 UQCRHP07919 91 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
CLIP2-203ENST00000395060 PDCL3Q9H2J4 239 aa17.6■□□□□ 0.41
CLIP2-203ENST00000395060 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
CLIP2-203ENST00000395060 TSC1Q92574 1164 aa17.6■□□□□ 0.41
CLIP2-203ENST00000395060 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
CLIP2-203ENST00000395060 SDSP20132 328 aa17.59■□□□□ 0.41
CLIP2-203ENST00000395060 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
CLIP2-203ENST00000395060 QRICH2Q9H0J4 1663 aa17.59■□□□□ 0.41
CLIP2-203ENST00000395060 RABEP1Q15276 862 aa17.59■□□□□ 0.41
CLIP2-203ENST00000395060 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
CLIP2-203ENST00000395060 USP26Q9BXU7 913 aa17.59■□□□□ 0.41
CLIP2-203ENST00000395060 CAMSAP1Q5T5Y3 1602 aa17.59■□□□□ 0.41
CLIP2-203ENST00000395060 DNTTIP2Q5QJE6 756 aaKnown RBP17.58■□□□□ 0.41
CLIP2-203ENST00000395060 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.41
CLIP2-203ENST00000395060 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.41
CLIP2-203ENST00000395060 ZNF830Q96NB3 372 aaPredicted RBP17.58■□□□□ 0.4
CLIP2-203ENST00000395060 CDK19Q9BWU1 502 aa17.58■□□□□ 0.4
CLIP2-203ENST00000395060 PPLO60437 1756 aa17.58■□□□□ 0.4
CLIP2-203ENST00000395060 NEURL4Q96JN8 1562 aa17.58■□□□□ 0.4
CLIP2-203ENST00000395060 FAM177BA6PVY3 158 aa17.58■□□□□ 0.4
CLIP2-203ENST00000395060 IL16Q14005 1332 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 PTMSP20962 102 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 NEK4P51957 841 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 NUCB2P80303 420 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 PLCB2Q00722 1185 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 TTC22Q5TAA0 569 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.57■□□□□ 0.4
CLIP2-203ENST00000395060 POLKQ9UBT6 870 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 ZDHHC9Q9Y397 364 aa17.57■□□□□ 0.4
CLIP2-203ENST00000395060 TSPOAP1O95153 1857 aa17.56■□□□□ 0.4
CLIP2-203ENST00000395060 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
CLIP2-203ENST00000395060 FCHSD2O94868 740 aa17.56■□□□□ 0.4
CLIP2-203ENST00000395060 NFE2L2Q16236 605 aa17.56■□□□□ 0.4
CLIP2-203ENST00000395060 ST18O60284 1047 aa17.56■□□□□ 0.4
CLIP2-203ENST00000395060 ESF1Q9H501 851 aaKnown RBP17.56■□□□□ 0.4
CLIP2-203ENST00000395060 GLI2P10070 1586 aa17.55■□□□□ 0.4
CLIP2-203ENST00000395060 INTS3Q68E01 1043 aaKnown RBP17.55■□□□□ 0.4
CLIP2-203ENST00000395060 LARP6Q9BRS8 491 aaKnown RBP17.55■□□□□ 0.4
CLIP2-203ENST00000395060 SETBP1Q9Y6X0 1596 aa17.55■□□□□ 0.4
CLIP2-203ENST00000395060 NEXMIFQ5QGS0 1516 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms