RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
ACTN1-203ENST00000394419 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
ACTN1-203ENST00000394419 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
ACTN1-203ENST00000394419 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
ACTN1-203ENST00000394419 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
ACTN1-203ENST00000394419 GLI2P10070 1586 aa13.07□□□□□ -0.32
ACTN1-203ENST00000394419 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
ACTN1-203ENST00000394419 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
ACTN1-203ENST00000394419 F6X3S4 739 aa13.06□□□□□ -0.32
ACTN1-203ENST00000394419 ANP32BQ92688 251 aaKnown RBP13.06□□□□□ -0.32
ACTN1-203ENST00000394419 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
ACTN1-203ENST00000394419 TSPYL4Q9UJ04 414 aa13.06□□□□□ -0.32
ACTN1-203ENST00000394419 CDC45O75419 566 aa13.06□□□□□ -0.32
ACTN1-203ENST00000394419 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-203ENST00000394419 FOXD4L3Q6VB84 417 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-203ENST00000394419 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
ACTN1-203ENST00000394419 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
ACTN1-203ENST00000394419 NRXN1Q9ULB1 1477 aa13.05□□□□□ -0.32
ACTN1-203ENST00000394419 IL13P35225 146 aa13.05□□□□□ -0.32
ACTN1-203ENST00000394419 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
ACTN1-203ENST00000394419 BMP2KLQ5H9B9 411 aa13.05□□□□□ -0.32
ACTN1-203ENST00000394419 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
ACTN1-203ENST00000394419 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
ACTN1-203ENST00000394419 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
ACTN1-203ENST00000394419 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
ACTN1-203ENST00000394419 RILPL2Q969X0 211 aa13.04□□□□□ -0.32
ACTN1-203ENST00000394419 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
ACTN1-203ENST00000394419 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
ACTN1-203ENST00000394419 OTUD7AQ8TE49 926 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-203ENST00000394419 HECW2Q9P2P5 1572 aa13.03□□□□□ -0.32
ACTN1-203ENST00000394419 FOXO3O43524 673 aa13.03□□□□□ -0.32
ACTN1-203ENST00000394419 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
ACTN1-203ENST00000394419 TSHZ3Q63HK5 1081 aa13.03□□□□□ -0.32
ACTN1-203ENST00000394419 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
ACTN1-203ENST00000394419 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
ACTN1-203ENST00000394419 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-203ENST00000394419 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-203ENST00000394419 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-203ENST00000394419 SETBP1Q9Y6X0 1596 aa13.02□□□□□ -0.32
ACTN1-203ENST00000394419 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.32
ACTN1-203ENST00000394419 EIF4A2Q14240 407 aaKnown RBP13.02□□□□□ -0.33
ACTN1-203ENST00000394419 MEIS3Q99687 375 aa13.02□□□□□ -0.33
ACTN1-203ENST00000394419 EXOC6BQ9Y2D4 811 aa13.02□□□□□ -0.33
ACTN1-203ENST00000394419 SSFA2P28290 1259 aa13.01□□□□□ -0.33
ACTN1-203ENST00000394419 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
ACTN1-203ENST00000394419 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
ACTN1-203ENST00000394419 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
ACTN1-203ENST00000394419 CD2BP2O95400 341 aaKnown RBP13.01□□□□□ -0.33
ACTN1-203ENST00000394419 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
ACTN1-203ENST00000394419 HMMRO75330 724 aa13.01□□□□□ -0.33
ACTN1-203ENST00000394419 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-203ENST00000394419 ACEP12821 1306 aa13□□□□□ -0.33
ACTN1-203ENST00000394419 EIF2S2P20042 333 aaKnown RBP13□□□□□ -0.33
ACTN1-203ENST00000394419 NLRP6P59044 892 aa13□□□□□ -0.33
ACTN1-203ENST00000394419 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
ACTN1-203ENST00000394419 PKNOX2Q96KN3 472 aa13□□□□□ -0.33
ACTN1-203ENST00000394419 FAM43AQ8N2R8 423 aa12.99□□□□□ -0.33
ACTN1-203ENST00000394419 GAS2L2Q8NHY3 880 aa12.99□□□□□ -0.33
ACTN1-203ENST00000394419 ARHGAP45Q92619 1136 aa12.99□□□□□ -0.33
ACTN1-203ENST00000394419 FRMPD1Q5SYB0 1578 aa12.99□□□□□ -0.33
ACTN1-203ENST00000394419 RBM33Q96EV2 1170 aaKnown RBP12.99□□□□□ -0.33
ACTN1-203ENST00000394419 GRPEL1Q9HAV7 217 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 EID1Q9Y6B2 187 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 METP08581 1390 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 ST18O60284 1047 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
ACTN1-203ENST00000394419 CAMSAP1Q5T5Y3 1602 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 MRE11P49959 708 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 SHPRHQ149N8 1683 aa12.98□□□□□ -0.33
ACTN1-203ENST00000394419 RBM25P49756 843 aaKnown RBP12.97□□□□□ -0.33
ACTN1-203ENST00000394419 ANO2Q9NQ90 1003 aa12.97□□□□□ -0.33
ACTN1-203ENST00000394419 PPLO60437 1756 aa12.97□□□□□ -0.33
ACTN1-203ENST00000394419 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
ACTN1-203ENST00000394419 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-203ENST00000394419 G2E3Q7L622 706 aa12.97□□□□□ -0.33
ACTN1-203ENST00000394419 TTC21BQ7Z4L5 1316 aa12.96□□□□□ -0.33
ACTN1-203ENST00000394419 GSPT1P15170 499 aaKnown RBP12.96□□□□□ -0.33
ACTN1-203ENST00000394419 SDSP20132 328 aa12.96□□□□□ -0.33
ACTN1-203ENST00000394419 RRAGDQ9NQL2 400 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-203ENST00000394419 NEO1Q92859 1461 aa12.96□□□□□ -0.33
ACTN1-203ENST00000394419 NEK4P51957 841 aa12.96□□□□□ -0.33
ACTN1-203ENST00000394419 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
ACTN1-203ENST00000394419 CAVIN1Q6NZI2 390 aaKnown RBP12.96□□□□□ -0.34
ACTN1-203ENST00000394419 PTPRMP28827 1452 aa12.95□□□□□ -0.34
ACTN1-203ENST00000394419 MAP4K4O95819 1239 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-203ENST00000394419 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
ACTN1-203ENST00000394419 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
ACTN1-203ENST00000394419 REC8O95072 547 aa12.95□□□□□ -0.34
ACTN1-203ENST00000394419 RPAP2Q8IXW5 612 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-203ENST00000394419 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
ACTN1-203ENST00000394419 RABEP1Q15276 862 aa12.94□□□□□ -0.34
ACTN1-203ENST00000394419 MTHFSDQ2M296 383 aaKnown RBP12.94□□□□□ -0.34
ACTN1-203ENST00000394419 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
ACTN1-203ENST00000394419 NLRP1Q9C000 1473 aa12.94□□□□□ -0.34
ACTN1-203ENST00000394419 PRPF40AO75400 957 aaKnown RBP12.94□□□□□ -0.34
ACTN1-203ENST00000394419 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
ACTN1-203ENST00000394419 SNX21Q969T3 373 aa12.94□□□□□ -0.34
ACTN1-203ENST00000394419 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms