RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 WDR63Q8IWG1 891 aa10.1□□□□□ -0.79
GAPVD1-207ENST00000394105 RRAGDQ9NQL2 400 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-207ENST00000394105 CGNL1Q0VF96 1302 aa10.1□□□□□ -0.79
GAPVD1-207ENST00000394105 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-207ENST00000394105 FAM83GA6ND36 823 aa10.1□□□□□ -0.79
GAPVD1-207ENST00000394105 KRT24Q2M2I5 525 aa10.1□□□□□ -0.79
GAPVD1-207ENST00000394105 USP6P35125 1406 aa10.09□□□□□ -0.79
GAPVD1-207ENST00000394105 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
GAPVD1-207ENST00000394105 PDE3AQ14432 1141 aa10.09□□□□□ -0.79
GAPVD1-207ENST00000394105 ZBTB40Q9NUA8 1239 aa10.09□□□□□ -0.79
GAPVD1-207ENST00000394105 CEBPAP49715 358 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-207ENST00000394105 CDCA8Q53HL2 280 aa10.09□□□□□ -0.79
GAPVD1-207ENST00000394105 C5P01031 1676 aa10.08□□□□□ -0.8
GAPVD1-207ENST00000394105 SHANK3Q9BYB0 1731 aa10.08□□□□□ -0.8
GAPVD1-207ENST00000394105 NCOA3Q9Y6Q9 1424 aa10.08□□□□□ -0.8
GAPVD1-207ENST00000394105 ALS2Q96Q42 1657 aa10.08□□□□□ -0.8
GAPVD1-207ENST00000394105 SETD1BQ9UPS6 1966 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-207ENST00000394105 MORC1Q86VD1 984 aa10.08□□□□□ -0.8
GAPVD1-207ENST00000394105 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 EXOSC9Q06265 439 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 CLUAP1Q96AJ1 413 aa10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 WASLO00401 505 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 KDRP35968 1356 aa10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 CACNA1FO60840 1977 aa10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 VAMP4O75379 141 aa10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 TXNDC2Q86VQ3 553 aa10.07□□□□□ -0.8
GAPVD1-207ENST00000394105 PLEKHG1Q9ULL1 1385 aa10.06□□□□□ -0.8
GAPVD1-207ENST00000394105 NCAPD2Q15021 1401 aa10.06□□□□□ -0.8
GAPVD1-207ENST00000394105 CD2BP2O95400 341 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-207ENST00000394105 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-207ENST00000394105 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-207ENST00000394105 C8orf58Q8NAV2 365 aa10.05□□□□□ -0.8
GAPVD1-207ENST00000394105 WDR43Q15061 677 aaKnown RBP eCLIP10.05□□□□□ -0.8
GAPVD1-207ENST00000394105 GSE1Q14687 1217 aa10.05□□□□□ -0.8
GAPVD1-207ENST00000394105 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
GAPVD1-207ENST00000394105 ZBTB7BO15156 539 aaPredicted RBP10.04□□□□□ -0.8
GAPVD1-207ENST00000394105 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
GAPVD1-207ENST00000394105 DCTN1Q14203 1278 aa10.04□□□□□ -0.8
GAPVD1-207ENST00000394105 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
GAPVD1-207ENST00000394105 SIRT1Q96EB6 747 aa10.03□□□□□ -0.8
GAPVD1-207ENST00000394105 ABCC4O15439 1325 aa10.03□□□□□ -0.8
GAPVD1-207ENST00000394105 TMEM57Q8N5G2 664 aa10.03□□□□□ -0.8
GAPVD1-207ENST00000394105 MSH6P52701 1360 aa10.03□□□□□ -0.8
GAPVD1-207ENST00000394105 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
GAPVD1-207ENST00000394105 PANK2Q9BZ23 570 aa10.03□□□□□ -0.8
GAPVD1-207ENST00000394105 SMC5Q8IY18 1101 aa10.02□□□□□ -0.8
GAPVD1-207ENST00000394105 USP35Q9P2H5 1018 aa10.02□□□□□ -0.81
GAPVD1-207ENST00000394105 TCHHQ07283 1943 aa10.02□□□□□ -0.81
GAPVD1-207ENST00000394105 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
GAPVD1-207ENST00000394105 TNRQ92752 1358 aa10.02□□□□□ -0.81
GAPVD1-207ENST00000394105 FOXO3O43524 673 aa10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 EIF4A2Q14240 407 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 MRPL50Q8N5N7 158 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 NUDT16Q96DE0 195 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 NOB1Q9ULX3 412 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 PPP6R1Q9UPN7 881 aa10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 IL16Q14005 1332 aa10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 RGS3P49796 1198 aa10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 PDZRN3Q9UPQ7 1066 aa10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 FSD2A1L4K1 749 aa10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
GAPVD1-207ENST00000394105 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
GAPVD1-207ENST00000394105 HMOX1P09601 288 aa10□□□□□ -0.81
GAPVD1-207ENST00000394105 HSP90AB2PQ58FF8 381 aa10□□□□□ -0.81
GAPVD1-207ENST00000394105 PXDNQ92626 1479 aa10□□□□□ -0.81
GAPVD1-207ENST00000394105 PRKAR2BP31323 418 aa10□□□□□ -0.81
GAPVD1-207ENST00000394105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10□□□□□ -0.81
GAPVD1-207ENST00000394105 MAP3K19Q56UN5 1328 aa10□□□□□ -0.81
GAPVD1-207ENST00000394105 U2AF1L5P0DN76 240 aaPredicted RBP10□□□□□ -0.81
GAPVD1-207ENST00000394105 U2AF1Q01081 240 aaKnown RBP eCLIP10□□□□□ -0.812e-9■□□□□ 11.3
GAPVD1-207ENST00000394105 TBC1D32Q96NH3 1257 aa9.99□□□□□ -0.81
GAPVD1-207ENST00000394105 SALL3Q9BXA9 1300 aa9.99□□□□□ -0.81
GAPVD1-207ENST00000394105 SCN11AQ9UI33 1791 aa9.99□□□□□ -0.81
GAPVD1-207ENST00000394105 HDAC1Q13547 482 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-207ENST00000394105 SRPK2P78362 688 aaKnown RBP9.99□□□□□ -0.81
GAPVD1-207ENST00000394105 ACEP12821 1306 aa9.98□□□□□ -0.81
GAPVD1-207ENST00000394105 MLECQ14165 292 aa9.98□□□□□ -0.81
GAPVD1-207ENST00000394105 GSPT1P15170 499 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-207ENST00000394105 MYT1LQ9UL68 1186 aa9.98□□□□□ -0.81
GAPVD1-207ENST00000394105 GAS2L3Q86XJ1 694 aa9.98□□□□□ -0.81
GAPVD1-207ENST00000394105 SLIT3O75094 1523 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 TTC21BQ7Z4L5 1316 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 ERICH6Q7L0X2 663 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 FCHSD2O94868 740 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 RIPK4P57078 832 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 ATF7IPQ6VMQ6 1270 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 NGEFQ8N5V2 710 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 IL25Q9H293 177 aa9.97□□□□□ -0.81
GAPVD1-207ENST00000394105 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.96□□□□□ -0.81
GAPVD1-207ENST00000394105 ABCA3Q99758 1704 aa9.96□□□□□ -0.81
GAPVD1-207ENST00000394105 XRCC6P12956 609 aaKnown RBP eCLIP9.96□□□□□ -0.81
GAPVD1-207ENST00000394105 STRCQ7RTU9 1775 aa9.96□□□□□ -0.82
GAPVD1-207ENST00000394105 OTUD7AQ8TE49 926 aaPredicted RBP9.96□□□□□ -0.82
GAPVD1-207ENST00000394105 COL9A3Q14050 684 aaPredicted RBP9.96□□□□□ -0.82
GAPVD1-207ENST00000394105 SLC26A8Q96RN1 970 aa9.95□□□□□ -0.82
GAPVD1-207ENST00000394105 UBR2Q8IWV8 1755 aa9.95□□□□□ -0.82
GAPVD1-207ENST00000394105 CHL1O00533 1208 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms