RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 ABCC1P33527 1531 aa8.03□□□□□ -1.12
TSPAN8-202ENST00000393330 LRP6O75581 1613 aa8.03□□□□□ -1.12
TSPAN8-202ENST00000393330 ZMYND10O75800 440 aa8.03□□□□□ -1.12
TSPAN8-202ENST00000393330 CCDC102AQ96A19 550 aa8.03□□□□□ -1.12
TSPAN8-202ENST00000393330 CTTNBP2Q8WZ74 1663 aa8.03□□□□□ -1.12
TSPAN8-202ENST00000393330 LRP5O75197 1615 aa8.02□□□□□ -1.13
TSPAN8-202ENST00000393330 TMEM94Q12767 1356 aa8.02□□□□□ -1.13
TSPAN8-202ENST00000393330 DDX11L8A8MPP1 907 aa8.01□□□□□ -1.13
TSPAN8-202ENST00000393330 SLC10A3P09131 477 aa8.01□□□□□ -1.13
TSPAN8-202ENST00000393330 FBXO31Q5XUX0 539 aaPredicted RBP8.01□□□□□ -1.13
TSPAN8-202ENST00000393330 BARGINQ6ZT62 677 aa8.01□□□□□ -1.13
TSPAN8-202ENST00000393330 NLRP1Q9C000 1473 aa8.01□□□□□ -1.13
TSPAN8-202ENST00000393330 ROBO1Q9Y6N7 1651 aa8.01□□□□□ -1.13
TSPAN8-202ENST00000393330 ARHGAP5Q13017 1502 aa8□□□□□ -1.13
TSPAN8-202ENST00000393330 RSPH4AQ5TD94 716 aa8□□□□□ -1.13
TSPAN8-202ENST00000393330 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
TSPAN8-202ENST00000393330 RDH13Q8NBN7 331 aa8□□□□□ -1.13
TSPAN8-202ENST00000393330 MIA2Q96PC5 1412 aa8□□□□□ -1.13
TSPAN8-202ENST00000393330 UGGT1Q9NYU2 1555 aa7.99□□□□□ -1.13
TSPAN8-202ENST00000393330 CFHP08603 1231 aa7.99□□□□□ -1.13
TSPAN8-202ENST00000393330 KCNC4Q03721 635 aa7.99□□□□□ -1.13
TSPAN8-202ENST00000393330 SPAG9O60271 1321 aaKnown RBP7.99□□□□□ -1.13
TSPAN8-202ENST00000393330 IQGAP1P46940 1657 aa7.99□□□□□ -1.13
TSPAN8-202ENST00000393330 ITGBL1O95965 494 aaPredicted RBP7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 KCNA6P17658 529 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 HRCP23327 699 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 COPS2P61201 443 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 MDM2Q00987 491 aaPredicted RBP7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 KMT5BQ4FZB7 885 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 MTRQ99707 1265 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 STRCP1A6NGW2 1772 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 CLTCQ00610 1675 aaKnown RBP7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 MSH6P52701 1360 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 C1QTNF8P60827 252 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 TJAP1Q5JTD0 557 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 PRR14Q9BWN1 585 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 ATP7AQ04656 1500 aa7.98□□□□□ -1.13
TSPAN8-202ENST00000393330 SF3B2Q13435 895 aaKnown RBP7.97□□□□□ -1.13
TSPAN8-202ENST00000393330 SULF1Q8IWU6 871 aa7.97□□□□□ -1.13
TSPAN8-202ENST00000393330 PCDHB3Q9Y5E6 796 aa7.97□□□□□ -1.13
TSPAN8-202ENST00000393330 PHLPP1O60346 1717 aa7.96□□□□□ -1.14
TSPAN8-202ENST00000393330 TXNDC2Q86VQ3 553 aa7.96□□□□□ -1.14
TSPAN8-202ENST00000393330 ZNF516Q92618 1163 aa7.96□□□□□ -1.14
TSPAN8-202ENST00000393330 C8orf37Q96NL8 207 aa7.96□□□□□ -1.14
TSPAN8-202ENST00000393330 IL21Q9HBE4 155 aa7.96□□□□□ -1.14
TSPAN8-202ENST00000393330 ACTN4O43707 911 aaKnown RBP7.95□□□□□ -1.14
TSPAN8-202ENST00000393330 TRPC5Q9UL62 973 aaPredicted RBP7.95□□□□□ -1.14
TSPAN8-202ENST00000393330 EID1Q9Y6B2 187 aa7.95□□□□□ -1.14
TSPAN8-202ENST00000393330 A2MP01023 1474 aa7.95□□□□□ -1.14
TSPAN8-202ENST00000393330 MYO5CQ9NQX4 1742 aa7.95□□□□□ -1.14
TSPAN8-202ENST00000393330 NWD1Q149M9 1564 aa7.95□□□□□ -1.14
TSPAN8-202ENST00000393330 SAMD9Q5K651 1589 aa7.95□□□□□ -1.14
TSPAN8-202ENST00000393330 PZPP20742 1482 aa7.94□□□□□ -1.14
TSPAN8-202ENST00000393330 KIDINS220Q9ULH0 1771 aa7.94□□□□□ -1.14
TSPAN8-202ENST00000393330 BLMP54132 1417 aaPredicted RBP7.94□□□□□ -1.14
TSPAN8-202ENST00000393330 BLOC1S3Q6QNY0 202 aa7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 NHSL1Q5SYE7 1610 aa7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 SCAF11Q99590 1463 aaKnown RBP7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 PRXQ9BXM0 1461 aa7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 CLCN1P35523 988 aa7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 PUS10Q3MIT2 529 aaKnown RBP7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 ZNF784Q8NCA9 323 aaPredicted RBP7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 SLC24A3Q9HC58 644 aa7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 GPCPD1Q9NPB8 672 aa7.93□□□□□ -1.14
TSPAN8-202ENST00000393330 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 ITSN2Q9NZM3 1697 aa7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 CLIP1P30622 1438 aa7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 ABCC3O15438 1527 aa7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 TTLL12Q14166 644 aaPredicted RBP7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 DEFB132Q7Z7B7 95 aa7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 NKX2-3Q8TAU0 364 aa7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 PODXL2Q9NZ53 605 aa7.92□□□□□ -1.14
TSPAN8-202ENST00000393330 A0A0G2JS52 829 aa7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 ZPR1O75312 459 aa7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 LTKP29376 864 aa7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 GCGRP47871 477 aa7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 LRRC59Q96AG4 307 aaKnown RBP7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 AK7Q96M32 723 aa7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 USP21Q9UK80 565 aa7.91□□□□□ -1.14
TSPAN8-202ENST00000393330 TRIM66O15016 1216 aa7.9□□□□□ -1.14
TSPAN8-202ENST00000393330 FUT2Q10981 343 aa7.9□□□□□ -1.14
TSPAN8-202ENST00000393330 ATP1B4Q9UN42 357 aaPredicted RBP7.9□□□□□ -1.14
TSPAN8-202ENST00000393330 TROQ12816 1431 aaPredicted RBP7.9□□□□□ -1.14
TSPAN8-202ENST00000393330 CD46P15529 392 aa7.89□□□□□ -1.15
TSPAN8-202ENST00000393330 PRDM15P57071 1507 aaPredicted RBP7.89□□□□□ -1.15
TSPAN8-202ENST00000393330 MAP3K1Q13233 1512 aa7.89□□□□□ -1.15
TSPAN8-202ENST00000393330 PLXNC1O60486 1568 aa7.89□□□□□ -1.15
TSPAN8-202ENST00000393330 KIF14Q15058 1648 aa7.89□□□□□ -1.15
TSPAN8-202ENST00000393330 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
TSPAN8-202ENST00000393330 XIRP1Q702N8 1843 aaKnown RBP7.89□□□□□ -1.15
TSPAN8-202ENST00000393330 SAMD9LQ8IVG5 1584 aa7.88□□□□□ -1.15
TSPAN8-202ENST00000393330 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
TSPAN8-202ENST00000393330 FAM217BQ9NTX9 383 aaPredicted RBP7.88□□□□□ -1.15
TSPAN8-202ENST00000393330 NCOA3Q9Y6Q9 1424 aa7.88□□□□□ -1.15
TSPAN8-202ENST00000393330 NR1I2O75469 434 aa7.88□□□□□ -1.15
TSPAN8-202ENST00000393330 SSTR3P32745 418 aaPredicted RBP7.88□□□□□ -1.15
TSPAN8-202ENST00000393330 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
TSPAN8-202ENST00000393330 HNRNPMP52272 730 aaKnown RBP eCLIP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms