RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 SKIP12755 728 aa8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 FSHRP23945 695 aa8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 RNF20Q5VTR2 975 aa8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 PKD2L1Q9P0L9 805 aa8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 TFIP11Q9UBB9 837 aaKnown RBP8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 MAP4K5Q9Y4K4 846 aa8.51□□□□□ -1.05
SNORA40.2-201ENST00000390847 TTC24A2A3L6 582 aaPredicted RBP8.5□□□□□ -1.05
SNORA40.2-201ENST00000390847 SIAH2O43255 324 aa8.5□□□□□ -1.05
SNORA40.2-201ENST00000390847 ALDH1A1P00352 501 aa8.5□□□□□ -1.05
SNORA40.2-201ENST00000390847 RFX1P22670 979 aa8.5□□□□□ -1.05
SNORA40.2-201ENST00000390847 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
SNORA40.2-201ENST00000390847 ATP9BO43861 1147 aa8.49□□□□□ -1.05
SNORA40.2-201ENST00000390847 ADH1CP00326 375 aa8.49□□□□□ -1.05
SNORA40.2-201ENST00000390847 LMOD1P29536 600 aaPredicted RBP8.49□□□□□ -1.05
SNORA40.2-201ENST00000390847 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
SNORA40.2-201ENST00000390847 NFATC2IPQ8NCF5 419 aa8.49□□□□□ -1.05
SNORA40.2-201ENST00000390847 WASF2Q9Y6W5 498 aa8.49□□□□□ -1.05
SNORA40.2-201ENST00000390847 ESPNB1AK53 854 aa8.48□□□□□ -1.05
SNORA40.2-201ENST00000390847 RGS20O76081 388 aa8.48□□□□□ -1.05
SNORA40.2-201ENST00000390847 MPNDQ8N594 471 aa8.48□□□□□ -1.05
SNORA40.2-201ENST00000390847 PLPP7Q8NBV4 271 aa8.48□□□□□ -1.05
SNORA40.2-201ENST00000390847 SNIP1Q8TAD8 396 aaKnown RBP8.48□□□□□ -1.05
SNORA40.2-201ENST00000390847 DOLKQ9UPQ8 538 aa8.48□□□□□ -1.05
SNORA40.2-201ENST00000390847 USP17L5A8MUK1 530 aa8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 CFAP70Q5T0N1 1121 aa8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 SEPT12Q8IYM1 358 aa8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 PHTF2Q8N3S3 785 aa8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 MAFBQ9Y5Q3 323 aaPredicted RBP8.47□□□□□ -1.05
SNORA40.2-201ENST00000390847 GDF9O60383 454 aa8.46□□□□□ -1.06
SNORA40.2-201ENST00000390847 GRM5P41594 1212 aa8.46□□□□□ -1.06
SNORA40.2-201ENST00000390847 OXLD1Q5BKU9 147 aa8.46□□□□□ -1.06
SNORA40.2-201ENST00000390847 CCDC85AQ96PX6 553 aaPredicted RBP8.46□□□□□ -1.06
SNORA40.2-201ENST00000390847 USP17L3A6NCW0 530 aa8.45□□□□□ -1.06
SNORA40.2-201ENST00000390847 USP17L4A6NCW7 530 aa8.45□□□□□ -1.06
SNORA40.2-201ENST00000390847 NR5A1Q13285 461 aa8.45□□□□□ -1.06
SNORA40.2-201ENST00000390847 MAP7D1Q3KQU3 841 aa8.45□□□□□ -1.06
SNORA40.2-201ENST00000390847 TSGA10IPQ3SY00 556 aa8.45□□□□□ -1.06
SNORA40.2-201ENST00000390847 USP17L2Q6R6M4 530 aa8.45□□□□□ -1.06
SNORA40.2-201ENST00000390847 USP17L1Q7RTZ2 530 aa8.45□□□□□ -1.06
SNORA40.2-201ENST00000390847 ERVH48-1M5A8F1 160 aa8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 DHX9Q08211 1270 aaKnown RBP8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 NCOA4Q13772 614 aa8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 TRIM67Q6ZTA4 783 aa8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 CCDC125Q86Z20 511 aa8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 CCDC116Q8IYX3 515 aa8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
SNORA40.2-201ENST00000390847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 J3QL48 77 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 NR3C2P08235 984 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 PRR20EP86478 221 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 PRR20CP86479 221 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 PRR20DP86480 221 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 PRR20BP86481 221 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 PRR20AP86496 221 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 NNTQ13423 1086 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 EML3Q32P44 896 aa8.43□□□□□ -1.06
SNORA40.2-201ENST00000390847 CDCA8Q53HL2 280 aa8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 PPP1R26Q5T8A7 1209 aaPredicted RBP8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 PLEKHM2Q8IWE5 1019 aa8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 TRIM52Q96A61 297 aa8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 PBXIP1Q96AQ6 731 aa8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 CDCA7Q9BWT1 371 aaPredicted RBP8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 TMPRSS4Q9NRS4 437 aa8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 TOR4AQ9NXH8 423 aa8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 CHIC2Q9UKJ5 165 aa8.42□□□□□ -1.06
SNORA40.2-201ENST00000390847 LZTS3O60299 673 aaPredicted RBP8.41□□□□□ -1.06
SNORA40.2-201ENST00000390847 MYCP01106 439 aaPredicted RBP8.41□□□□□ -1.06
SNORA40.2-201ENST00000390847 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
SNORA40.2-201ENST00000390847 VRTNQ9H8Y1 702 aa8.41□□□□□ -1.06
SNORA40.2-201ENST00000390847 CYLDQ9NQC7 956 aa8.41□□□□□ -1.06
SNORA40.2-201ENST00000390847 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
SNORA40.2-201ENST00000390847 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
SNORA40.2-201ENST00000390847 SMPD1P17405 629 aa8.4□□□□□ -1.06
SNORA40.2-201ENST00000390847 USP4Q13107 963 aa8.4□□□□□ -1.06
SNORA40.2-201ENST00000390847 ZNF784Q8NCA9 323 aaPredicted RBP8.4□□□□□ -1.06
SNORA40.2-201ENST00000390847 SIRT1Q96EB6 747 aa8.4□□□□□ -1.06
SNORA40.2-201ENST00000390847 MKRN1Q9UHC7 482 aaKnown RBP8.4□□□□□ -1.06
SNORA40.2-201ENST00000390847 EMILIN1Q9Y6C2 1016 aa8.4□□□□□ -1.06
SNORA40.2-201ENST00000390847 PPP1R15AO75807 674 aaPredicted RBP8.39□□□□□ -1.07
SNORA40.2-201ENST00000390847 MYT1Q01538 1121 aa8.39□□□□□ -1.07
SNORA40.2-201ENST00000390847 ACIN1Q9UKV3 1341 aaKnown RBP8.38□□□□□ -1.07
SNORA40.2-201ENST00000390847 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
SNORA40.2-201ENST00000390847 SCTRP47872 440 aa8.38□□□□□ -1.07
SNORA40.2-201ENST00000390847 CC2D2BQ6DHV5 1058 aa8.38□□□□□ -1.07
SNORA40.2-201ENST00000390847 TRIM50Q86XT4 487 aa8.38□□□□□ -1.07
SNORA40.2-201ENST00000390847 FAM187AA6NFU0 413 aa8.37□□□□□ -1.07
SNORA40.2-201ENST00000390847 RASA1P20936 1047 aa8.37□□□□□ -1.07
SNORA40.2-201ENST00000390847 WDR4P57081 412 aaKnown RBP8.37□□□□□ -1.07
SNORA40.2-201ENST00000390847 PSME1Q06323 249 aa8.37□□□□□ -1.07
SNORA40.2-201ENST00000390847 KANK4Q5T7N3 995 aaPredicted RBP8.37□□□□□ -1.07
SNORA40.2-201ENST00000390847 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
SNORA40.2-201ENST00000390847 GFRA3O60609 400 aa8.36□□□□□ -1.07
SNORA40.2-201ENST00000390847 ZIC2O95409 532 aaPredicted RBP8.36□□□□□ -1.07
SNORA40.2-201ENST00000390847 ATP1A2P50993 1020 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms