RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 PTPN5P54829 565 aa5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 USP4Q13107 963 aa5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 SEPT12Q8IYM1 358 aa5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 CCER1Q8TC90 406 aaPredicted RBP5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 BAP1Q92560 729 aa5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 PRDM9Q9NQV7 894 aa5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 NOVA2Q9UNW9 492 aaKnown RBP5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 NOD1Q9Y239 953 aa5.11□□□□□ -1.59
TRAJ40-201ENST00000390497 ZBTB24O43167 697 aaPredicted RBP5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 GGCXP38435 758 aa5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 PTK7Q13308 1070 aa5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 NCOA4Q13772 614 aa5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 NBPF20Q3BBV1 942 aa5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 LARGE2Q8N3Y3 721 aa5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 FAM174AQ8TBP5 190 aa5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 ZNF516Q92618 1163 aa5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 RBM19Q9Y4C8 960 aaKnown RBP5.1□□□□□ -1.59
TRAJ40-201ENST00000390497 POTEMA6NI47 508 aa5.09□□□□□ -1.59
TRAJ40-201ENST00000390497 ARID4AP29374 1257 aaPredicted RBP5.09□□□□□ -1.59
TRAJ40-201ENST00000390497 SWI5Q1ZZU3 235 aa5.09□□□□□ -1.59
TRAJ40-201ENST00000390497 ANKMY2Q8IV38 441 aa5.09□□□□□ -1.59
TRAJ40-201ENST00000390497 DEPDC4Q8N2C3 294 aa5.09□□□□□ -1.59
TRAJ40-201ENST00000390497 ZNF511Q8NB15 262 aa5.09□□□□□ -1.59
TRAJ40-201ENST00000390497 GNEQ9Y223 722 aaKnown RBP5.09□□□□□ -1.59
TRAJ40-201ENST00000390497 MAGEB6P1A0A0J9YX57 407 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L15C9J2P7 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L10C9JJH3 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L13C9JLJ4 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L12C9JPN9 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L11C9JVI0 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L21D6R901 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L18D6R9N7 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L22D6RA61 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L17D6RBQ6 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L19D6RCP7 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L20D6RJB6 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 TLL1O43897 1013 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 KCNC4Q03721 635 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 USP17L24Q0WX57 530 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 TMEM164Q5U3C3 297 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 TRAF7Q6Q0C0 670 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 TRMT44Q8IYL2 757 aaKnown RBP5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 OGFOD1Q8N543 542 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 CLP1Q92989 425 aaKnown RBP5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 SLC10A4Q96EP9 437 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 DNAAF2Q9NVR5 837 aaKnown RBP5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 HCSTQ9UBK5 93 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 DOLKQ9UPQ8 538 aa5.08□□□□□ -1.6
TRAJ40-201ENST00000390497 GIGYF1O75420 1035 aaPredicted RBP5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 S1PR4O95977 384 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 VARSP26640 1264 aaKnown RBP5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 SSFA2P28290 1259 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 MFAP1P55081 439 aaKnown RBP5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 ERFEQ4G0M1 354 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 CRTC2Q53ET0 693 aaPredicted RBP5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 CDAN1Q8IWY9 1227 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 CARD14Q9BXL6 1004 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 ESF1Q9H501 851 aaKnown RBP5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 PCDH10Q9P2E7 1040 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 MTMR7Q9Y216 660 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 FCF1Q9Y324 198 aaKnown RBP5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 IVNS1ABPQ9Y6Y0 642 aa5.07□□□□□ -1.6
TRAJ40-201ENST00000390497 ESPNB1AK53 854 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 CD2BP2O95400 341 aaKnown RBP5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 SEC13P55735 322 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 WNT7BP56706 349 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 SH3BP2P78314 561 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 SIX5Q8N196 739 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 RGS22Q8NE09 1264 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 C1QTNF2Q9BXJ5 285 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 ZMIZ1Q9ULJ6 1067 aa5.06□□□□□ -1.6
TRAJ40-201ENST00000390497 CARNS1A5YM72 827 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 ZBTB7BO15156 539 aaPredicted RBP5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 RPIAP49247 311 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 DPYDQ12882 1025 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 CCDC27Q2M243 656 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 TSGA10IPQ3SY00 556 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 SND1Q7KZF4 910 aaKnown RBP eCLIP5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 TXNDC2Q86VQ3 553 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 ANKLE1Q8NAG6 615 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 C1orf216Q8TAB5 229 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 NKX2-3Q8TAU0 364 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 STK32AQ8WU08 396 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 FOXJ1Q92949 421 aa5.05□□□□□ -1.6
TRAJ40-201ENST00000390497 ITGBL1O95965 494 aaPredicted RBP5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 MYCP01106 439 aaPredicted RBP5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 GTF2IP78347 998 aa5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 CLDN10P78369 228 aa5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 FAM69CQ0P6D2 419 aa5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 OXLD1Q5BKU9 147 aa5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 C4orf48Q5BLP8 95 aa5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 CCDC102BQ68D86 513 aa5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 CCDC85AQ96PX6 553 aaPredicted RBP5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 MAP4K5Q9Y4K4 846 aa5.04□□□□□ -1.6
TRAJ40-201ENST00000390497 M0R2N6 131 aa5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 ERCC3P19447 782 aa5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 DHX9Q08211 1270 aaKnown RBP5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 LINC01559Q495D7 138 aa5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 MPNDQ8N594 471 aa5.03□□□□□ -1.6
TRAJ40-201ENST00000390497 KCTD15Q96SI1 283 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms