RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 SSTR3P32745 418 aaPredicted RBP3.83□□□□□ -1.8
TRAV41-201ENST00000390468 RANGAP1P46060 587 aaPredicted RBP3.83□□□□□ -1.8
TRAV41-201ENST00000390468 KCNH2Q12809 1159 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 PTPRNQ16849 979 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 UBE2Q2Q8WVN8 375 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 SPIRE2Q8WWL2 714 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 TSC1Q92574 1164 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 CARMIL1Q5VZK9 1371 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 GRIN2BQ13224 1484 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 CFAP43Q8NDM7 1665 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 IQGAP2Q13576 1575 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 EFCAB5A4FU69 1503 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 ZNF608Q9ULD9 1512 aaPredicted RBP3.82□□□□□ -1.8
TRAV41-201ENST00000390468 SNAPC4Q5SXM2 1469 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 TDRD9Q8NDG6 1382 aaKnown RBP3.82□□□□□ -1.8
TRAV41-201ENST00000390468 ZIC2O95409 532 aaPredicted RBP3.82□□□□□ -1.8
TRAV41-201ENST00000390468 ADH1CP00326 375 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 BMP2P12643 396 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 TIMP2P16035 220 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
TRAV41-201ENST00000390468 MTMR2Q13614 643 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 CSPP1Q1MSJ5 1256 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 NPAS3Q8IXF0 933 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 ZFAND3Q9H8U3 227 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 EVA1BQ9NVM1 165 aa3.82□□□□□ -1.8
TRAV41-201ENST00000390468 SAMD9Q5K651 1589 aa3.81□□□□□ -1.8
TRAV41-201ENST00000390468 AQRO60306 1485 aaKnown RBP eCLIP3.81□□□□□ -1.8
TRAV41-201ENST00000390468 MAGI1Q96QZ7 1491 aaPredicted RBP3.81□□□□□ -1.8
TRAV41-201ENST00000390468 CLIP1P30622 1438 aa3.81□□□□□ -1.8
TRAV41-201ENST00000390468 IGF1RP08069 1367 aa3.81□□□□□ -1.8
TRAV41-201ENST00000390468 VARSP26640 1264 aaKnown RBP3.81□□□□□ -1.8
TRAV41-201ENST00000390468 FAM174AQ8TBP5 190 aa3.81□□□□□ -1.8
TRAV41-201ENST00000390468 FOXJ1Q92949 421 aa3.81□□□□□ -1.8
TRAV41-201ENST00000390468 MAP10Q9P2G4 905 aa3.81□□□□□ -1.8
TRAV41-201ENST00000390468 FHAD1B1AJZ9 1412 aa3.8□□□□□ -1.8
TRAV41-201ENST00000390468 UPP2O95045 317 aa3.8□□□□□ -1.8
TRAV41-201ENST00000390468 ERICH6BQ5W0A0 696 aa3.8□□□□□ -1.8
TRAV41-201ENST00000390468 KCTD17Q8N5Z5 321 aa3.8□□□□□ -1.8
TRAV41-201ENST00000390468 ITPKCQ96DU7 683 aa3.8□□□□□ -1.8
TRAV41-201ENST00000390468 PCF11O94913 1555 aaKnown RBP3.8□□□□□ -1.8
TRAV41-201ENST00000390468 CEP170Q5SW79 1584 aa3.8□□□□□ -1.8
TRAV41-201ENST00000390468 GRIN2AQ12879 1464 aa3.79□□□□□ -1.8
TRAV41-201ENST00000390468 NR3C2P08235 984 aa3.79□□□□□ -1.8
TRAV41-201ENST00000390468 NEUROD1Q13562 356 aa3.79□□□□□ -1.8
TRAV41-201ENST00000390468 BEGAINQ9BUH8 593 aa3.79□□□□□ -1.8
TRAV41-201ENST00000390468 KIAA0556O60303 1618 aa3.79□□□□□ -1.8
TRAV41-201ENST00000390468 SYNJ2O15056 1496 aa3.79□□□□□ -1.8
TRAV41-201ENST00000390468 ARAP1Q96P48 1450 aa3.79□□□□□ -1.8
TRAV41-201ENST00000390468 VPS8Q8N3P4 1428 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 HECW1Q76N89 1606 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 MAGEB6P1A0A0J9YX57 407 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 CFAP99D6REC4 459 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 PPFIA3O75145 1194 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 FSHRP23945 695 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 GIGYF2Q6Y7W6 1299 aaKnown RBP3.78□□□□□ -1.8
TRAV41-201ENST00000390468 CABLES1Q8TDN4 633 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 CNTNAP3BQ96NU0 1288 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 TBC1D2Q9BYX2 928 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 CNTNAP3Q9BZ76 1288 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 PCDHB15Q9Y5E8 787 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 ARHGAP35Q9NRY4 1499 aa3.78□□□□□ -1.8
TRAV41-201ENST00000390468 SPDYE5A6NIY4 337 aa3.77□□□□□ -1.81
TRAV41-201ENST00000390468 FIGNL2A6NMB9 653 aa3.77□□□□□ -1.81
TRAV41-201ENST00000390468 LINC00528Q8N1L1 170 aa3.77□□□□□ -1.81
TRAV41-201ENST00000390468 CARD14Q9BXL6 1004 aa3.77□□□□□ -1.81
TRAV41-201ENST00000390468 PODXL2Q9NZ53 605 aa3.77□□□□□ -1.81
TRAV41-201ENST00000390468 SUPT6HQ7KZ85 1726 aaKnown RBP3.77□□□□□ -1.81
TRAV41-201ENST00000390468 SHROOM2Q13796 1616 aa3.77□□□□□ -1.81
TRAV41-201ENST00000390468 RAPGEF6Q8TEU7 1601 aa3.77□□□□□ -1.81
TRAV41-201ENST00000390468 TIAM1Q13009 1591 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 UGGT2Q9NYU1 1516 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 NUTM2BA6NNL0 878 aaPredicted RBP3.76□□□□□ -1.81
TRAV41-201ENST00000390468 NUTM2EB1AL46 878 aaPredicted RBP3.76□□□□□ -1.81
TRAV41-201ENST00000390468 NEFLP07196 543 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 SUZ12Q15022 739 aaKnown RBP3.76□□□□□ -1.81
TRAV41-201ENST00000390468 C4orf48Q5BLP8 95 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 NUTM2DQ5VT03 806 aaPredicted RBP3.76□□□□□ -1.81
TRAV41-201ENST00000390468 DESI1Q6ICB0 168 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 RSBN1LQ6PCB5 846 aaPredicted RBP3.76□□□□□ -1.81
TRAV41-201ENST00000390468 LYPD8Q6UX82 237 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 NUTM2AQ8IVF1 878 aaPredicted RBP3.76□□□□□ -1.81
TRAV41-201ENST00000390468 PKNOX2Q96KN3 472 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 KLF16Q9BXK1 252 aaPredicted RBP3.76□□□□□ -1.81
TRAV41-201ENST00000390468 ZBTB3Q9H5J0 574 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 DNMT3LQ9UJW3 386 aa3.76□□□□□ -1.81
TRAV41-201ENST00000390468 KIAA0586Q9BVV6 1533 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 ITSN2Q9NZM3 1697 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 FYCO1Q9BQS8 1478 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 SPTLC1O15269 473 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 PER1O15534 1290 aaPredicted RBP3.75□□□□□ -1.81
TRAV41-201ENST00000390468 VSIG8P0DPA2 414 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 NR5A1Q13285 461 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 GLIPR1L2Q4G1C9 344 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 VASH1Q7L8A9 365 aaPredicted RBP3.75□□□□□ -1.81
TRAV41-201ENST00000390468 BPHLQ86WA6 291 aaPredicted RBP3.75□□□□□ -1.81
TRAV41-201ENST00000390468 TMEM151AQ8N4L1 468 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 MPNDQ8N594 471 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 CDK15Q96Q40 435 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 NUP160Q12769 1436 aa3.75□□□□□ -1.81
TRAV41-201ENST00000390468 FHOD3Q2V2M9 1422 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms