RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 FAM135BQ49AJ0 1406 aa19.36■□□□□ 0.69
LRCH1-202ENST00000389797 KIF20BQ96Q89 1820 aa19.36■□□□□ 0.69
LRCH1-202ENST00000389797 MED14O60244 1454 aa19.36■□□□□ 0.69
LRCH1-202ENST00000389797 SLIT1O75093 1534 aa19.35■□□□□ 0.69
LRCH1-202ENST00000389797 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
LRCH1-202ENST00000389797 GGNBP2Q9H3C7 697 aa19.35■□□□□ 0.69
LRCH1-202ENST00000389797 PLEKHG1Q9ULL1 1385 aa19.35■□□□□ 0.69
LRCH1-202ENST00000389797 RIPK4P57078 832 aa19.35■□□□□ 0.69
LRCH1-202ENST00000389797 MRE11P49959 708 aa19.35■□□□□ 0.69
LRCH1-202ENST00000389797 PNNQ9H307 717 aaKnown RBP19.35■□□□□ 0.69
LRCH1-202ENST00000389797 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
LRCH1-202ENST00000389797 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
LRCH1-202ENST00000389797 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
LRCH1-202ENST00000389797 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
LRCH1-202ENST00000389797 NUCB1Q02818 461 aa19.34■□□□□ 0.69
LRCH1-202ENST00000389797 ATP7BP35670 1465 aa19.33■□□□□ 0.69
LRCH1-202ENST00000389797 FYB1O15117 783 aa19.33■□□□□ 0.69
LRCH1-202ENST00000389797 SNX21Q969T3 373 aa19.33■□□□□ 0.69
LRCH1-202ENST00000389797 SIRT1Q96EB6 747 aa19.33■□□□□ 0.69
LRCH1-202ENST00000389797 TERF2IPQ9NYB0 399 aa19.33■□□□□ 0.69
LRCH1-202ENST00000389797 PANK2Q9BZ23 570 aa19.33■□□□□ 0.68
LRCH1-202ENST00000389797 ZNF692Q9BU19 519 aaPredicted RBP19.32■□□□□ 0.68
LRCH1-202ENST00000389797 LNPKQ9C0E8 428 aa19.32■□□□□ 0.68
LRCH1-202ENST00000389797 ZMYND15Q9H091 742 aa19.32■□□□□ 0.68
LRCH1-202ENST00000389797 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
LRCH1-202ENST00000389797 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.32■□□□□ 0.68
LRCH1-202ENST00000389797 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
LRCH1-202ENST00000389797 COL3A1P02461 1466 aaPredicted RBP19.31■□□□□ 0.68
LRCH1-202ENST00000389797 ISY1Q9ULR0 285 aaKnown RBP19.31■□□□□ 0.68
LRCH1-202ENST00000389797 WASLO00401 505 aaPredicted RBP19.31■□□□□ 0.68
LRCH1-202ENST00000389797 CHD1LQ86WJ1 897 aa19.31■□□□□ 0.68
LRCH1-202ENST00000389797 DIAPH1O60610 1272 aaKnown RBP19.3■□□□□ 0.68
LRCH1-202ENST00000389797 VSIG10Q8N0Z9 540 aa19.3■□□□□ 0.68
LRCH1-202ENST00000389797 CPSF1Q10570 1443 aaKnown RBP19.3■□□□□ 0.68
LRCH1-202ENST00000389797 PTPRUQ92729 1446 aa19.3■□□□□ 0.68
LRCH1-202ENST00000389797 CIZ1Q9ULV3 898 aaPredicted RBP19.3■□□□□ 0.68
LRCH1-202ENST00000389797 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
LRCH1-202ENST00000389797 HSP90AB1P08238 724 aaKnown RBP19.29■□□□□ 0.68
LRCH1-202ENST00000389797 FGD1P98174 961 aa19.29■□□□□ 0.68
LRCH1-202ENST00000389797 DDIT3P35638 169 aa19.28■□□□□ 0.68
LRCH1-202ENST00000389797 CLCN1P35523 988 aa19.28■□□□□ 0.68
LRCH1-202ENST00000389797 BMP2KLQ5H9B9 411 aa19.28■□□□□ 0.68
LRCH1-202ENST00000389797 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
LRCH1-202ENST00000389797 CHMP4BQ9H444 224 aaKnown RBP19.28■□□□□ 0.68
LRCH1-202ENST00000389797 GRPEL1Q9HAV7 217 aa19.28■□□□□ 0.68
LRCH1-202ENST00000389797 MON2Q7Z3U7 1717 aa19.28■□□□□ 0.68
LRCH1-202ENST00000389797 HDGFL2Q7Z4V5 671 aaPredicted RBP19.27■□□□□ 0.68
LRCH1-202ENST00000389797 GBP4Q96PP9 640 aa19.27■□□□□ 0.68
LRCH1-202ENST00000389797 PPIP5K1Q6PFW1 1433 aa19.27■□□□□ 0.68
LRCH1-202ENST00000389797 AKAP12Q02952 1782 aa19.27■□□□□ 0.67
LRCH1-202ENST00000389797 CDC42BPGQ6DT37 1551 aa19.26■□□□□ 0.67
LRCH1-202ENST00000389797 TNPO1Q92973 898 aaKnown RBP19.25■□□□□ 0.67
LRCH1-202ENST00000389797 NCKAP5LQ9HCH0 1330 aa19.25■□□□□ 0.67
LRCH1-202ENST00000389797 FCHSD2O94868 740 aa19.25■□□□□ 0.67
LRCH1-202ENST00000389797 RIMS1Q86UR5 1692 aaKnown RBP19.25■□□□□ 0.67
LRCH1-202ENST00000389797 HSP90AA1P07900 732 aaKnown RBP19.25■□□□□ 0.67
LRCH1-202ENST00000389797 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
LRCH1-202ENST00000389797 GCC1Q96CN9 775 aa19.25■□□□□ 0.67
LRCH1-202ENST00000389797 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
LRCH1-202ENST00000389797 ANKRD45Q5TZF3 282 aa19.24■□□□□ 0.67
LRCH1-202ENST00000389797 PRR36Q9H6K5 1346 aa19.24■□□□□ 0.67
LRCH1-202ENST00000389797 PTMSP20962 102 aa19.24■□□□□ 0.67
LRCH1-202ENST00000389797 BRPF1P55201 1214 aaPredicted RBP19.24■□□□□ 0.67
LRCH1-202ENST00000389797 SKOR2Q2VWA4 1001 aaPredicted RBP19.23■□□□□ 0.67
LRCH1-202ENST00000389797 NUDT16Q96DE0 195 aaKnown RBP19.23■□□□□ 0.67
LRCH1-202ENST00000389797 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
LRCH1-202ENST00000389797 PNPLA6Q8IY17 1366 aa19.23■□□□□ 0.67
LRCH1-202ENST00000389797 ITSN1Q15811 1721 aa19.22■□□□□ 0.67
LRCH1-202ENST00000389797 RAB3GAP1Q15042 981 aa19.22■□□□□ 0.67
LRCH1-202ENST00000389797 NAP1L5Q96NT1 182 aaPredicted RBP19.22■□□□□ 0.67
LRCH1-202ENST00000389797 CEP170BQ9Y4F5 1589 aaPredicted RBP19.22■□□□□ 0.67
LRCH1-202ENST00000389797 EDC4Q6P2E9 1401 aaKnown RBP19.22■□□□□ 0.67
LRCH1-202ENST00000389797 ZBTB7BO15156 539 aaPredicted RBP19.21■□□□□ 0.67
LRCH1-202ENST00000389797 EID1Q9Y6B2 187 aa19.2■□□□□ 0.66
LRCH1-202ENST00000389797 MAP2P11137 1827 aaKnown RBP19.2■□□□□ 0.66
LRCH1-202ENST00000389797 DIP2AQ14689 1571 aa19.2■□□□□ 0.66
LRCH1-202ENST00000389797 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.2■□□□□ 0.662e-7■□□□□ 10
LRCH1-202ENST00000389797 ARHGAP45Q92619 1136 aa19.2■□□□□ 0.66
LRCH1-202ENST00000389797 ADAMTSL3P82987 1691 aa19.2■□□□□ 0.66
LRCH1-202ENST00000389797 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
LRCH1-202ENST00000389797 XRN1Q8IZH2 1706 aaKnown RBP19.19■□□□□ 0.66
LRCH1-202ENST00000389797 CALD1Q05682 793 aaKnown RBP19.19■□□□□ 0.66
LRCH1-202ENST00000389797 KIF2CQ99661 725 aa19.19■□□□□ 0.66
LRCH1-202ENST00000389797 NRKQ7Z2Y5 1582 aa19.19■□□□□ 0.66
LRCH1-202ENST00000389797 CCDC61Q9Y6R9 512 aa19.19■□□□□ 0.66
LRCH1-202ENST00000389797 K7ELQ4 463 aaPredicted RBP19.18■□□□□ 0.66
LRCH1-202ENST00000389797 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
LRCH1-202ENST00000389797 TBC1D9Q6ZT07 1266 aa19.18■□□□□ 0.66
LRCH1-202ENST00000389797 TRIM44Q96DX7 344 aaPredicted RBP19.18■□□□□ 0.66
LRCH1-202ENST00000389797 TBX22Q9Y458 520 aa19.18■□□□□ 0.66
LRCH1-202ENST00000389797 PTCH1Q13635 1447 aa19.18■□□□□ 0.66
LRCH1-202ENST00000389797 VAMP4O75379 141 aa19.17■□□□□ 0.66
LRCH1-202ENST00000389797 MRPL50Q8N5N7 158 aaKnown RBP19.17■□□□□ 0.66
LRCH1-202ENST00000389797 ESPNB1AK53 854 aa19.17■□□□□ 0.66
LRCH1-202ENST00000389797 FBLN1P23142 703 aa19.17■□□□□ 0.66
LRCH1-202ENST00000389797 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
LRCH1-202ENST00000389797 ZNF142P52746 1687 aaPredicted RBP19.16■□□□□ 0.66
LRCH1-202ENST00000389797 NFE2L2Q16236 605 aa19.16■□□□□ 0.66
LRCH1-202ENST00000389797 GOLGA6L22H0YM25 854 aa19.15■□□□□ 0.66
LRCH1-202ENST00000389797 FOXD4L1Q9NU39 408 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms